Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_D12
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 38 0.007
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 37 0.016
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 36 0.028
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 36 0.028
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 36 0.028
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 36 0.028
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.037
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.037
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.037
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 35 0.087
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 35 0.087
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.61
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 32 0.61
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.81
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 1.1
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 1.1
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 1.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.4
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 1.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 1.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.9
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 30 1.9
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.5
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 2.5
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.5
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 2.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 2.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 2.5
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.5
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 3.3
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 3.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.3
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 3.3
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 3.3
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 3.3
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 3.3
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.3
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 4.3
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 29 4.3
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 29 4.3
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 29 4.3
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 29 5.7
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 5.7
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 7.5
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 28 7.5
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 28 7.5
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 28 7.5
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 7.5
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 28 9.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 9.9
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 38.3 bits (85), Expect = 0.007
Identities = 27/86 (31%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPP-RXGXEXPXFXXXXPGTPXXXKXXXXPGX 593
P P G G P+G PP P P R G + P PG P PG
Sbjct: 176 PGAPGGDAPPGEAGPKGPPGPPGSPGAPGEPGRPGDDAPS-EPLIPGEPGPQGPPGPPGQ 234
Query: 592 XXPPG--GXXXGXXSGGILXPPGXXG 521
P G G G + G PPG G
Sbjct: 235 AGPDGQPGAPGGPGTPGSKGPPGNPG 260
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 37.1 bits (82), Expect = 0.016
Identities = 29/106 (27%), Positives = 31/106 (29%), Gaps = 1/106 (0%)
Frame = -1
Query: 835 PXXXXGXKXERGGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXP 656
P G ++G P P G G P G PP P P P
Sbjct: 187 PTGPPGPPGKQGPKGPNGEPGAPGTPGGNALPGPPGPPGPQGPPGADGLPGNP-GAPGVP 245
Query: 655 XFXXXXPGTPXXXKXXXXPGXXXPPG-GXXXGXXSGGILXPPGXXG 521
PGTP PG PPG G G PPG G
Sbjct: 246 GQVIEVPGTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPG 291
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/81 (25%), Positives = 22/81 (27%)
Frame = +3
Query: 522 PXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFSXH 701
P PG +P PG PG G PG G G
Sbjct: 236 PGNPGAPGVPGQVIEVPGTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGA 295
Query: 702 XGGFXXPRGXXXPPPXPPXGG 764
G P G PP P GG
Sbjct: 296 PGNPGSP-GEPGPPGQPGAGG 315
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/86 (29%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +3
Query: 516 PXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFS 695
P P G K P PGG PG G PG P G G
Sbjct: 191 PGPPGKQGPKGPNGEPGAPGTPGGNALPGPPGPPGPQGPPGADGLPGNPGAP--GVPGQV 248
Query: 696 XHXGGFXXPRGXXXPP-PXPPXGGXG 770
G P G PP P P G G
Sbjct: 249 IEVPGTPGPAGPPGPPGPIGPPGQPG 274
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 36.3 bits (80), Expect = 0.028
Identities = 31/110 (28%), Positives = 32/110 (29%)
Frame = -1
Query: 802 GGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPX 623
GGG P PP G GG P G P P P G P P P
Sbjct: 93 GGGGGCDGCCNPGPP--GPGGSPGKP-GKPGKPGAPGAPGNPGKGASAPCEPVTQP--PC 147
Query: 622 XXKXXXXPGXXXPPGGXXXGXXSGGILXPPGXXGXGXXGVXAPLNFQGNE 473
PG P G G P G G G G P GN+
Sbjct: 148 QPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/92 (27%), Positives = 26/92 (28%), Gaps = 4/92 (4%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRX--GXEXPXFXXXXPGTPXXXKXXXXPG 596
P P G G G P P C P P G P G P PG
Sbjct: 125 PGAP-GNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPG 183
Query: 595 XXXPPG--GXXXGXXSGGILXPPGXXGXGXXG 506
PPG G + G PG G G
Sbjct: 184 PAGPPGPAGPAGNDGAPGAPGGPGEPGASEQG 215
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 36.3 bits (80), Expect = 0.028
Identities = 31/110 (28%), Positives = 32/110 (29%)
Frame = -1
Query: 802 GGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPX 623
GGG P PP G GG P G P P P G P P P
Sbjct: 93 GGGGGCDGCCNPGPP--GPGGSPGKP-GKPGKPGAPGAPGNPGKGASAPCEPVTQP--PC 147
Query: 622 XXKXXXXPGXXXPPGGXXXGXXSGGILXPPGXXGXGXXGVXAPLNFQGNE 473
PG P G G P G G G G P GN+
Sbjct: 148 QPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/92 (27%), Positives = 26/92 (28%), Gaps = 4/92 (4%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRX--GXEXPXFXXXXPGTPXXXKXXXXPG 596
P P G G G P P C P P G P G P PG
Sbjct: 125 PGAP-GNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPG 183
Query: 595 XXXPPG--GXXXGXXSGGILXPPGXXGXGXXG 506
PPG G + G PG G G
Sbjct: 184 PAGPPGPAGPAGNDGAPGAPGGPGEPGASEQG 215
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 36.3 bits (80), Expect = 0.028
Identities = 31/110 (28%), Positives = 32/110 (29%)
Frame = -1
Query: 802 GGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPX 623
GGG P PP G GG P G P P P G P P P
Sbjct: 93 GGGGGCDGCCNPGPP--GPGGSPGKP-GKPGKPGAPGAPGNPGKGASAPCEPVTQP--PC 147
Query: 622 XXKXXXXPGXXXPPGGXXXGXXSGGILXPPGXXGXGXXGVXAPLNFQGNE 473
PG P G G P G G G G P GN+
Sbjct: 148 QPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/92 (27%), Positives = 26/92 (28%), Gaps = 4/92 (4%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRX--GXEXPXFXXXXPGTPXXXKXXXXPG 596
P P G G G P P C P P G P G P PG
Sbjct: 125 PGAP-GNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPG 183
Query: 595 XXXPPG--GXXXGXXSGGILXPPGXXGXGXXG 506
PPG G + G PG G G
Sbjct: 184 PAGPPGPAGPAGNDGAPGAPGGPGEPGASEQG 215
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 36.3 bits (80), Expect = 0.028
Identities = 31/110 (28%), Positives = 32/110 (29%)
Frame = -1
Query: 802 GGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPX 623
GGG P PP G GG P G P P P G P P P
Sbjct: 93 GGGGGCDGCCNPGPP--GPGGSPGKP-GKPGKPGAPGAPGNPGKGASAPCEPVTQP--PC 147
Query: 622 XXKXXXXPGXXXPPGGXXXGXXSGGILXPPGXXGXGXXGVXAPLNFQGNE 473
PG P G G P G G G G P GN+
Sbjct: 148 QPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/92 (27%), Positives = 26/92 (28%), Gaps = 4/92 (4%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRX--GXEXPXFXXXXPGTPXXXKXXXXPG 596
P P G G G P P C P P G P G P PG
Sbjct: 125 PGAP-GNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPG 183
Query: 595 XXXPPG--GXXXGXXSGGILXPPGXXGXGXXG 506
PPG G + G PG G G
Sbjct: 184 PAGPPGPAGPAGNDGAPGAPGGPGEPGASEQG 215
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.037
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXX 590
P PP G G PP P PPR G P P P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 589 XPPGGXXXGXXSGGILXPPGXXG 521
PP G G L PP G
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGG 319
Score = 32.7 bits (71), Expect = 0.35
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = -1
Query: 838 PPXXXXGXKXERGGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEX 659
PP G G G PP G P G PP P PPR G
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 658 PXFXXXXPGTPXXXKXXXXPGXXXPPGG 575
P P G PP G
Sbjct: 299 PP-PPPRGSPPTGSLPPPQAGGSPPPAG 325
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXK-XXXXPGXXX 587
PP G G P PP P PP G P P P P
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 586 PPGGXXXGXXSGGILXPPG 530
PP G +GG P G
Sbjct: 307 PPTGSLPPPQAGGSPPPAG 325
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 2/79 (2%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXP 584
PP G PR PP P PP G P P P + G P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 583 P--GGXXXGXXSGGILXPP 533
P GG +G PP
Sbjct: 315 PQAGGSPPPAGTGSPPPPP 333
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +3
Query: 720 PRGXXXPPPXPPXGGXGXSXLXXAXPPPLSXFXPXXXXGGXXP 848
P PPP PP G + PPP + P G P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 274
Score = 27.9 bits (59), Expect = 9.9
Identities = 28/108 (25%), Positives = 31/108 (28%), Gaps = 3/108 (2%)
Frame = +3
Query: 534 GGXKIPPDXXPXXXPP--GGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFSXHXG 707
G + PP P PP G G + G P G G
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
Query: 708 GFXXP-RGXXXPPPXPPXGGXGXSXLXXAXPPPLSXFXPXXXXGGXXP 848
G P R PPP PP G L PPP + P G P
Sbjct: 287 GSPPPPRAGSPPPPPPPRGSPPTGSL----PPPQAGGSPPPAGTGSPP 330
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 742 PPXPRXEGXXXXPSXXRPPPPSXXSXXXXXXGGXLP 849
PP P G P PPPP S GG P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.037
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXX 590
P PP G G PP P PPR G P P P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 589 XPPGGXXXGXXSGGILXPPGXXG 521
PP G G L PP G
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGG 340
Score = 32.7 bits (71), Expect = 0.35
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = -1
Query: 838 PPXXXXGXKXERGGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEX 659
PP G G G PP G P G PP P PPR G
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 658 PXFXXXXPGTPXXXKXXXXPGXXXPPGG 575
P P G PP G
Sbjct: 320 PP-PPPRGSPPTGSLPPPQAGGSPPPAG 346
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXK-XXXXPGXXX 587
PP G G P PP P PP G P P P P
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 586 PPGGXXXGXXSGGILXPPG 530
PP G +GG P G
Sbjct: 328 PPTGSLPPPQAGGSPPPAG 346
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 2/79 (2%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXP 584
PP G PR PP P PP G P P P + G P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 583 P--GGXXXGXXSGGILXPP 533
P GG +G PP
Sbjct: 336 PQAGGSPPPAGTGSPPPPP 354
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +3
Query: 720 PRGXXXPPPXPPXGGXGXSXLXXAXPPPLSXFXPXXXXGGXXP 848
P PPP PP G + PPP + P G P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 295
Score = 27.9 bits (59), Expect = 9.9
Identities = 28/108 (25%), Positives = 31/108 (28%), Gaps = 3/108 (2%)
Frame = +3
Query: 534 GGXKIPPDXXPXXXPP--GGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFSXHXG 707
G + PP P PP G G + G P G G
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
Query: 708 GFXXP-RGXXXPPPXPPXGGXGXSXLXXAXPPPLSXFXPXXXXGGXXP 848
G P R PPP PP G L PPP + P G P
Sbjct: 308 GSPPPPRAGSPPPPPPPRGSPPTGSL----PPPQAGGSPPPAGTGSPP 351
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 742 PPXPRXEGXXXXPSXXRPPPPSXXSXXXXXXGGXLP 849
PP P G P PPPP S GG P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.037
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXX 590
P PP G G PP P PPR G P P P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 589 XPPGGXXXGXXSGGILXPPGXXG 521
PP G G L PP G
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGG 325
Score = 32.7 bits (71), Expect = 0.35
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = -1
Query: 838 PPXXXXGXKXERGGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEX 659
PP G G G PP G P G PP P PPR G
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 658 PXFXXXXPGTPXXXKXXXXPGXXXPPGG 575
P P G PP G
Sbjct: 305 PP-PPPRGSPPTGSLPPPQAGGSPPPAG 331
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXK-XXXXPGXXX 587
PP G G P PP P PP G P P P P
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 586 PPGGXXXGXXSGGILXPPG 530
PP G +GG P G
Sbjct: 313 PPTGSLPPPQAGGSPPPAG 331
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 2/79 (2%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXP 584
PP G PR PP P PP G P P P + G P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 583 P--GGXXXGXXSGGILXPP 533
P GG +G PP
Sbjct: 321 PQAGGSPPPAGTGSPPPPP 339
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +3
Query: 720 PRGXXXPPPXPPXGGXGXSXLXXAXPPPLSXFXPXXXXGGXXP 848
P PPP PP G + PPP + P G P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 280
Score = 27.9 bits (59), Expect = 9.9
Identities = 28/108 (25%), Positives = 31/108 (28%), Gaps = 3/108 (2%)
Frame = +3
Query: 534 GGXKIPPDXXPXXXPP--GGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFSXHXG 707
G + PP P PP G G + G P G G
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
Query: 708 GFXXP-RGXXXPPPXPPXGGXGXSXLXXAXPPPLSXFXPXXXXGGXXP 848
G P R PPP PP G L PPP + P G P
Sbjct: 293 GSPPPPRAGSPPPPPPPRGSPPTGSL----PPPQAGGSPPPAGTGSPP 336
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 742 PPXPRXEGXXXXPSXXRPPPPSXXSXXXXXXGGXLP 849
PP P G P PPPP S GG P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 34.7 bits (76), Expect = 0.087
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 675 RGGXGFSXHXGGFXXPRGXXXPPPXPPXGGXGXSXLXXAXPPPL 806
RGG G + G + G P P PP GG G PPP+
Sbjct: 639 RGGAGAKANKGWYGSGGGSSMPMPVPPPGGLGGFMPPPPPPPPM 682
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +3
Query: 705 GGFXXPRGXXXPPPXPPXGGXGXSXLXXAXPPPLS 809
GGF P PPP PP G S L A PPP S
Sbjct: 670 GGFMPP-----PPPPPPMPGDLSSLLAAAPPPPPS 699
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 34.7 bits (76), Expect = 0.087
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 675 RGGXGFSXHXGGFXXPRGXXXPPPXPPXGGXGXSXLXXAXPPPL 806
RGG G + G + G P P PP GG G PPP+
Sbjct: 639 RGGAGAKANKGWYGSGGGSSMPMPVPPPGGLGGFMPPPPPPPPM 682
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +3
Query: 705 GGFXXPRGXXXPPPXPPXGGXGXSXLXXAXPPPLS 809
GGF P PPP PP G S L A PPP S
Sbjct: 670 GGFMPP-----PPPPPPMPGDLSSLLAAAPPPPPS 699
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 31.9 bits (69), Expect = 0.61
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 4/87 (4%)
Frame = -1
Query: 769 PXPPXGGXG--GGXXXPRGXXKP--PXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXX 602
P P G G G P G P P P PR + PG P
Sbjct: 145 PPGPSGHPGKPGRPGRPGGHGMPGMPGLGASPCQPRTQSQCQQCPQGPPGPPGLNGQPGL 204
Query: 601 PGXXXPPGGXXXGXXSGGILXPPGXXG 521
PG PPG G L PPG G
Sbjct: 205 PGGMGPPGQSMSNVLPGP-LGPPGPPG 230
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.61
Identities = 30/110 (27%), Positives = 31/110 (28%)
Frame = -1
Query: 802 GGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPX 623
GGG P PP G GG P G P P G P P P
Sbjct: 108 GGGGGCTGCCNPGPP--GPGGRPGKP-GTPGKPGAPGNPGASGKGAAAPCEPSTPP--PC 162
Query: 622 XXKXXXXPGXXXPPGGXXXGXXSGGILXPPGXXGXGXXGVXAPLNFQGNE 473
PG P G G P G G G G P GN+
Sbjct: 163 QPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGND 212
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/95 (26%), Positives = 27/95 (28%)
Frame = +3
Query: 516 PXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFS 695
P P P G P P G PG G PG P + G +
Sbjct: 170 PGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSA 229
Query: 696 XHXGGFXXPRGXXXPPPXPPXGGXGXSXLXXAXPP 800
GG P P P P G G S A P
Sbjct: 230 ---GGEAGPGPAGPPGPAGPAGPDGQSGSGSAGGP 261
Score = 28.3 bits (60), Expect = 7.5
Identities = 27/104 (25%), Positives = 28/104 (26%), Gaps = 5/104 (4%)
Frame = -1
Query: 760 PXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXPP 581
P G G G P G PP P P + P G P
Sbjct: 191 PAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGPAGPAGPD 250
Query: 580 GGXXXGXXSG-GILXPPGXXG----XGXXGVXAPLNFQGNEDHK 464
G G G G PPG G G G P G E K
Sbjct: 251 GQSGSGSAGGPGPKGPPGPAGQPGSDGNPGTAGPPGNPGGEGEK 294
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 31.9 bits (69), Expect = 0.61
Identities = 22/69 (31%), Positives = 24/69 (34%)
Frame = -1
Query: 727 PRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXPPGGXXXGXXSGG 548
P +PP C P PR P F PG P PG PG +G
Sbjct: 159 PERVFEPPPCLPCPQGPRGVPGHPGF----PGDPGEYGIGGRPGSDGMPGKPGDPGLAGP 214
Query: 547 ILXPPGXXG 521
I PPG G
Sbjct: 215 I-GPPGESG 222
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/93 (27%), Positives = 26/93 (27%), Gaps = 3/93 (3%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXP 584
PP G GG PP P P G P PG PG P
Sbjct: 334 PPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPP-VSSAPGNFAPPPQSGPPGAFAP 392
Query: 583 PG---GXXXGXXSGGILXPPGXXGXGXXGVXAP 494
P G G G PP G G G P
Sbjct: 393 PPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGP 425
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/105 (28%), Positives = 33/105 (31%)
Frame = +3
Query: 507 PXXPXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGX 686
P P PG PP P PG P G P G P GG
Sbjct: 367 PPPPVSSAPGNFAPPPQSGP----PGAFAPPPSAF-----GAPQGPGGPGGYGPPPPGGP 417
Query: 687 GFSXHXGGFXXPRGXXXPPPXPPXGGXGXSXLXXAXPPPLSXFXP 821
G G + P+G PP GG G A PP + F P
Sbjct: 418 GAP---GSYGPPQGGPGGFGPPPPGGPG------AYGPPPTGFPP 453
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/98 (27%), Positives = 29/98 (29%), Gaps = 3/98 (3%)
Frame = -1
Query: 805 RGGGXAXXRXXXPXPPXGGXG-GGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGT 629
R G A P P G G G P+G P E P G PG
Sbjct: 177 RPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPPGP 236
Query: 628 PXXXKXXXXPGXXXPPGGXXXGXXSG--GILXPPGXXG 521
P PG P G +G G PPG G
Sbjct: 237 PGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGPPG 274
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/83 (26%), Positives = 22/83 (26%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXX 590
P P G PRG PP P P PG P G
Sbjct: 175 PGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPP 234
Query: 589 XPPGGXXXGXXSGGILXPPGXXG 521
PPG G PPG G
Sbjct: 235 GPPGAPGNDGPPG----PPGPKG 253
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/98 (27%), Positives = 29/98 (29%), Gaps = 3/98 (3%)
Frame = -1
Query: 805 RGGGXAXXRXXXPXPPXGGXG-GGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGT 629
R G A P P G G G P+G P E P G PG
Sbjct: 177 RPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPPGP 236
Query: 628 PXXXKXXXXPGXXXPPGGXXXGXXSG--GILXPPGXXG 521
P PG P G +G G PPG G
Sbjct: 237 PGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGPPG 274
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/83 (26%), Positives = 22/83 (26%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXX 590
P P G PRG PP P P PG P G
Sbjct: 175 PGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPP 234
Query: 589 XPPGGXXXGXXSGGILXPPGXXG 521
PPG G PPG G
Sbjct: 235 GPPGAPGNDGPPG----PPGPKG 253
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/89 (30%), Positives = 27/89 (30%), Gaps = 1/89 (1%)
Frame = +3
Query: 507 PXXPXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGX 686
P P P P G PP PPG PG PG K P G
Sbjct: 144 PWKPCPQGPPGPPGPP------GPPGDSGEPGSPGLPGQDAAPGEPGPKGPKGPP--GAP 195
Query: 687 GFSXHXGGFXXPRGXXXPPPXP-PXGGXG 770
G H PRG P P P G G
Sbjct: 196 GAPEHQESQECPRGEPLIPGEPGPPGEAG 224
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/91 (26%), Positives = 24/91 (26%)
Frame = +3
Query: 498 AKTPXXPXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXR 677
A P P P G PP PPG PG G PG P
Sbjct: 195 AGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVN-SPGGPGP 253
Query: 678 GGXGFSXHXGGFXXPRGXXXPPPXPPXGGXG 770
G G G P P P G G
Sbjct: 254 AGPPGPPGPPGQDGSGGAAQPGPPGPPGPPG 284
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 657 GXSXPXRGGXGFSXHXGGFXXPRGXXXPPPXPP 755
G + P GG G GG+ P+G PPP PP
Sbjct: 76 GYNRPYGGGGG-----GGYGRPQGYVPPPPPPP 103
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/79 (26%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Frame = -2
Query: 726 PXXAXNPPGVXKXPXPPXEVXKXXXSXXXPXEPXXXXRXFXXXGXKXPPXV-KXGXPXPG 550
P PP P PP P P G PP + G P G
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 331
Query: 549 GFXPPXXXGGXGXXGFXPP 493
G PP G G PP
Sbjct: 332 GMPPPPPPGMRYPGGMPPP 350
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 1.9
Identities = 32/105 (30%), Positives = 35/105 (33%)
Frame = -2
Query: 708 PPGVXKXPXPPXEVXKXXXSXXXPXEPXXXXRXFXXXGXKXPPXVKXGXPXPGGFXPPXX 529
PP P PP + P P G PP G P P PP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP---PPPPP 776
Query: 528 XGGXGXXGFXPPLIFKGMRITSFAPY*XVIPRILRSPPPTHPLIE 394
G G G PP GM FAP VIP L PP P ++
Sbjct: 777 PG--GFKGGPPPPPPPGM----FAPMAPVIPDYL--PPKKVPKVD 813
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 3/72 (4%)
Frame = -1
Query: 769 PXPPXGGX---GGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXP 599
P PP G GG P PP P PP G P P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGGCPPP 771
Query: 598 GXXXPPGGXXXG 563
PPGG G
Sbjct: 772 PPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 1.9
Identities = 32/105 (30%), Positives = 35/105 (33%)
Frame = -2
Query: 708 PPGVXKXPXPPXEVXKXXXSXXXPXEPXXXXRXFXXXGXKXPPXVKXGXPXPGGFXPPXX 529
PP P PP + P P G PP G P P PP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP---PPPPP 776
Query: 528 XGGXGXXGFXPPLIFKGMRITSFAPY*XVIPRILRSPPPTHPLIE 394
G G G PP GM FAP VIP L PP P ++
Sbjct: 777 PG--GFKGGPPPPPPPGM----FAPMAPVIPDYL--PPKKVPKVD 813
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 3/72 (4%)
Frame = -1
Query: 769 PXPPXGGX---GGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXP 599
P PP G GG P PP P PP G P P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGGCPPP 771
Query: 598 GXXXPPGGXXXG 563
PPGG G
Sbjct: 772 PPPPPPGGFKGG 783
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/79 (26%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Frame = -2
Query: 726 PXXAXNPPGVXKXPXPPXEVXKXXXSXXXPXEPXXXXRXFXXXGXKXPPXV-KXGXPXPG 550
P PP P PP P P G PP + G P G
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 341
Query: 549 GFXPPXXXGGXGXXGFXPP 493
G PP G G PP
Sbjct: 342 GMPPPPPPGMRYPGGMPPP 360
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 1.9
Identities = 32/105 (30%), Positives = 35/105 (33%)
Frame = -2
Query: 708 PPGVXKXPXPPXEVXKXXXSXXXPXEPXXXXRXFXXXGXKXPPXVKXGXPXPGGFXPPXX 529
PP P PP + P P G PP G P P PP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP---PPPPP 359
Query: 528 XGGXGXXGFXPPLIFKGMRITSFAPY*XVIPRILRSPPPTHPLIE 394
G G G PP GM FAP VIP L PP P ++
Sbjct: 360 PG--GFKGGPPPPPPPGM----FAPMAPVIPDYL--PPKKVPKVD 396
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 3/72 (4%)
Frame = -1
Query: 769 PXPPXGGX---GGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXP 599
P PP G GG P PP P PP G P P P P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGGCPPP 354
Query: 598 GXXXPPGGXXXG 563
PPGG G
Sbjct: 355 PPPPPPGGFKGG 366
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/74 (29%), Positives = 22/74 (29%), Gaps = 2/74 (2%)
Frame = -1
Query: 709 PPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXP--PGGXXXGXXSGGILXP 536
PP C P G P PG P PG P P G G P
Sbjct: 136 PPQCPCTAAPGLGGPPGPPGQDGIPGNPGRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGP 195
Query: 535 PGXXGXGXXGVXAP 494
PG G G AP
Sbjct: 196 PGEPGALLPGGDAP 209
Score = 27.9 bits (59), Expect = 9.9
Identities = 27/86 (31%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +3
Query: 492 RGAKTPXXPXPXXPG--GXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXS 665
+G P P P PG G + PP P PGG PG G PG K G
Sbjct: 175 QGPSGPPGP-PGQPGQPGQRGPPGE-PGALLPGGDAPPGPSGPPGRPGAPG-QPGKAG-- 229
Query: 666 XPXRGGXGFSXHXGGFXXPRGXXXPP 743
P + G G RG PP
Sbjct: 230 SPGQDGSNGDAGVAGEPGQRGPPGPP 255
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/98 (27%), Positives = 27/98 (27%), Gaps = 3/98 (3%)
Frame = -1
Query: 805 RGGGXAXXRXXXPXPPXGGXG-GGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGT 629
R G A P P G G G P G P E P G PG
Sbjct: 175 RPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGP 234
Query: 628 PXXXKXXXXPGXXXPPGGXXXGXXSG--GILXPPGXXG 521
P PG P G G G PPG G
Sbjct: 235 PGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPPG 272
Score = 27.9 bits (59), Expect = 9.9
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXP 584
P G G P KPP P P P PG P PG
Sbjct: 116 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCP---QGPPGPPGPPGAPGDPGEAGT 172
Query: 583 PG--GXXXGXXSGGILXPPGXXG 521
PG G S G PPG G
Sbjct: 173 PGRPGTDAAPGSPGPRGPPGPAG 195
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/98 (27%), Positives = 28/98 (28%), Gaps = 3/98 (3%)
Frame = -1
Query: 805 RGGGXAXXRXXXPXPPXGGXG-GGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGT 629
R G A P P G G G P G P E P G PG
Sbjct: 170 RPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGP 229
Query: 628 PXXXKXXXXPGXXXPPG--GXXXGXXSGGILXPPGXXG 521
P PG P G G + G PPG G
Sbjct: 230 PGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPG 267
Score = 27.9 bits (59), Expect = 9.9
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXP 584
P G G P KPP P P P PG P PG
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCP---QGPPGPPGPPGAPGDPGEAGT 167
Query: 583 PG--GXXXGXXSGGILXPPGXXG 521
PG G S G PPG G
Sbjct: 168 PGRPGTDAAPGSPGPRGPPGPAG 190
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/98 (26%), Positives = 29/98 (29%), Gaps = 1/98 (1%)
Frame = -1
Query: 865 GGRXXXGXXPPXXXXGXKXERGGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXP 686
GG G PP G ++ P P GG G P G PP
Sbjct: 125 GGPGGPGGPPPF---GQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMG 181
Query: 685 XPPRXGXE-XPXFXXXXPGTPXXXKXXXXPGXXXPPGG 575
PP G + P G P PG PGG
Sbjct: 182 GPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGG 219
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/98 (26%), Positives = 29/98 (29%), Gaps = 1/98 (1%)
Frame = -1
Query: 865 GGRXXXGXXPPXXXXGXKXERGGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXP 686
GG G PP G ++ P P GG G P G PP
Sbjct: 405 GGPGGPGGPPPF---GQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMG 461
Query: 685 XPPRXGXE-XPXFXXXXPGTPXXXKXXXXPGXXXPPGG 575
PP G + P G P PG PGG
Sbjct: 462 GPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGG 499
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/98 (27%), Positives = 28/98 (28%), Gaps = 3/98 (3%)
Frame = -1
Query: 805 RGGGXAXXRXXXPXPPXGGXG-GGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGT 629
R G A P P G G G P G P E P G PG
Sbjct: 170 RPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGP 229
Query: 628 PXXXKXXXXPGXXXPPG--GXXXGXXSGGILXPPGXXG 521
P PG P G G + G PPG G
Sbjct: 230 PGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPG 267
Score = 27.9 bits (59), Expect = 9.9
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXP 584
P G G P KPP P P P PG P PG
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCP---QGPPGPPGPPGAPGDPGEAGT 167
Query: 583 PG--GXXXGXXSGGILXPPGXXG 521
PG G S G PPG G
Sbjct: 168 PGRPGTDAAPGSPGPRGPPGPAG 190
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = -1
Query: 814 KXERGGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXP--XPPR 674
K + GG PP G GGG P G PP P PPR
Sbjct: 610 KNNQAGGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPR 658
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = -1
Query: 814 KXERGGGXAXXRXXXPXPPXGGXGGGXXXPRGXXKPPXCXEXP--XPPR 674
K + GG PP G GGG P G PP P PPR
Sbjct: 610 KNNQAGGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPR 658
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = +3
Query: 516 PXPXXPGGXKIPPDXXPXXXPP---GGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGX 686
P P P G P P GG PG + G PG P RGG
Sbjct: 139 PGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGG- 197
Query: 687 GFSXHXGGFXXPRGXXXPPPXPPXGGXG 770
G P G PP P GG G
Sbjct: 198 ---QRSRGLPGPSGRPGPP--GPAGGPG 220
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/96 (27%), Positives = 30/96 (31%)
Frame = +3
Query: 516 PXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFS 695
P P P G P PG G + G+PG + G P GG G
Sbjct: 169 PGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSR----GLPGPSG-RPGPPGPA-GGPGQP 222
Query: 696 XHXGGFXXPRGXXXPPPXPPXGGXGXSXLXXAXPPP 803
H GG P P P G G + A P
Sbjct: 223 GHSGGAGSPGPQGPPGPSGQPGHSGNDGVPGAPGNP 258
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 585 PPXVKXGXPXPGGFXPPXXXGGXGXXGFXPPLI 487
PP G P P G PP G G G PPLI
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPG-GGGGMYPPLI 813
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 585 PPXVKXGXPXPGGFXPPXXXGGXGXXGFXPPLI 487
PP G P P G PP G G G PPLI
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPG-GGGGMYPPLI 813
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/84 (29%), Positives = 26/84 (30%), Gaps = 2/84 (2%)
Frame = +3
Query: 507 PXXPXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPG--XXXXKXGXSXPXRG 680
P P P P + P P PPG PG G PG K G P RG
Sbjct: 182 PGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGP-RG 240
Query: 681 GXGFSXHXGGFXXPRGXXXPPPXP 752
G G G PP P
Sbjct: 241 PPGIP----GAPGQPGRPGPPGEP 260
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 720 PRGXXXPPPXPPXGGXGXSXLXXAXPPP 803
P PPP PP G + + A PPP
Sbjct: 605 PHAVPPPPPPPPPQSFGMAPISSAAPPP 632
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 739 PPPXPRXEGXXXXPSXXRPPPPS 807
PPP R E P+ PPPPS
Sbjct: 558 PPPPTRVESHGLAPARPPPPPPS 580
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 720 PRGXXXPPPXPPXGGXGXSXLXXAXPPP 803
P PPP PP G + + A PPP
Sbjct: 431 PHAVPPPPPPPPPQSFGMAPISSAAPPP 458
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 739 PPPXPRXEGXXXXPSXXRPPPPS 807
PPP R E P+ PPPPS
Sbjct: 384 PPPPTRVESHGLAPARPPPPPPS 406
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.3
Identities = 27/104 (25%), Positives = 29/104 (27%), Gaps = 5/104 (4%)
Frame = +3
Query: 507 PXXPXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXP----- 671
P P GG P PGG PG G PG + G P
Sbjct: 175 PGKPGAPGVGGGSGAPGAPGPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQPGPNGQPG 234
Query: 672 XRGGXGFSXHXGGFXXPRGXXXPPPXPPXGGXGXSXLXXAXPPP 803
RG G + GG P G P G G A P
Sbjct: 235 PRGPPGQAGSPGGNGQPGGPGQPGQRGSDGQPGNDGQPGAPGQP 278
Score = 27.9 bits (59), Expect = 9.9
Identities = 25/90 (27%), Positives = 26/90 (28%), Gaps = 2/90 (2%)
Frame = +3
Query: 507 PXXPXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGG- 683
P P P P G P PG PG G PG G P R G
Sbjct: 154 PCKPCPPGPAGE---PGHDGAPGAPGKPGAPGVGGGSGAPGAPGPKGAPGGPGQPGRDGQ 210
Query: 684 XGFSXHXGGFXXPRGXXXPPPXP-PXGGXG 770
G + G G P P P G G
Sbjct: 211 PGQAGQPGSSSSEPGQPGPNGQPGPRGPPG 240
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/84 (29%), Positives = 26/84 (30%), Gaps = 2/84 (2%)
Frame = +3
Query: 507 PXXPXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPG--XXXXKXGXSXPXRG 680
P P P P + P P PPG PG G PG K G P RG
Sbjct: 163 PGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGP-RG 221
Query: 681 GXGFSXHXGGFXXPRGXXXPPPXP 752
G G G PP P
Sbjct: 222 PPGIP----GAPGQPGRPGPPGEP 241
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 585 PPXVKXGXPXPGGFXPPXXXGGXGXXGFXPPLI 487
PP G P P G PP G G G PPLI
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPG-GGGGMYPPLI 813
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 585 PPXVKXGXPXPGGFXPPXXXGGXGXXGFXPPLI 487
PP G P P G PP G G G PPLI
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPG-GGGGMYPPLI 813
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/95 (26%), Positives = 25/95 (26%), Gaps = 5/95 (5%)
Frame = -1
Query: 847 GXXPPXXXXGXKXERGGGXAXXRXXXPXPPXG-----GXGGGXXXPRGXXKPPXCXEXPX 683
G P G K RG R P P G G G P G P P
Sbjct: 180 GAAPRPGPPGPKGPRGAPGNSGRAGAPGQPGNDAHGYGGGVGAPGPAGPRGAPGPAGHPG 239
Query: 682 PPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXPPG 578
G P PG P PG PG
Sbjct: 240 SSGGGRPGPAGPKGAPGQPGRPGPDGHPGQPGRPG 274
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.3
Identities = 26/82 (31%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Frame = +3
Query: 522 PXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXF---XGVPGXXXXKXGXSXPXRGGXGF 692
P P K PP PPG PG Q GVPG G S P +G G
Sbjct: 148 PPKPPCQKCPPGPPGPAGPPGPKGLPGPQGDAGTSGQDGVPG-LPGPPGPSGP-QGAPGV 205
Query: 693 SXHXGGFXXP-RGXXXPPPXPP 755
G P + PP PP
Sbjct: 206 PGEKGPTGEPGKVINGAPPGPP 227
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/82 (29%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Frame = +3
Query: 522 PXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFSXH 701
P PG P+ PPG PG G+PG G RG G S
Sbjct: 205 PGAPGDKGPTPEGDLKEGPPGDEGPPGPIGAPGMPGLPGRNGLTGGQG--ERGWPGVSGE 262
Query: 702 XG-----GFXXPRGXXXPPPXP 752
G G P G PP P
Sbjct: 263 SGEPGYPGPEGPMGGQGPPGEP 284
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/82 (29%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Frame = +3
Query: 522 PXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFSXH 701
P PG P+ PPG PG G+PG G RG G S
Sbjct: 242 PGAPGDKGPTPEGDLKEGPPGDEGPPGPIGAPGMPGLPGRNGLTGGQG--ERGWPGVSGE 299
Query: 702 XG-----GFXXPRGXXXPPPXP 752
G G P G PP P
Sbjct: 300 SGEPGYPGPEGPMGGQGPPGEP 321
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/82 (29%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Frame = +3
Query: 522 PXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFSXH 701
P PG P+ PPG PG G+PG G RG G S
Sbjct: 226 PGAPGDKGPTPEGDLKEGPPGDEGPPGPIGAPGMPGLPGRNGLTGGQG--ERGWPGVSGE 283
Query: 702 XG-----GFXXPRGXXXPPPXP 752
G G P G PP P
Sbjct: 284 SGEPGYPGPEGPMGGQGPPGEP 305
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/91 (26%), Positives = 25/91 (27%)
Frame = +3
Query: 531 PGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFSXHXGG 710
PG P PG PG Q G G G +G G H G
Sbjct: 245 PGDAGAPGAPGQVVAGPGSVGPPGPQGPPGLAGPDGQPGHGGGGQPGPQGPPGDDGHPG- 303
Query: 711 FXXPRGXXXPPPXPPXGGXGXSXLXXAXPPP 803
G P GG G S PPP
Sbjct: 304 --EDGGAGGPGQPGQDGGSGGSGACDHCPPP 332
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/74 (25%), Positives = 21/74 (28%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXX 590
P PP G +G PP P P E PG+P PG
Sbjct: 161 PGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPPGENGRNGEPQPGSPGEPGRPGQPGSR 220
Query: 589 XPPGGXXXGXXSGG 548
P G GG
Sbjct: 221 GPAGQPGKDGAQGG 234
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 5.7
Identities = 30/101 (29%), Positives = 31/101 (30%)
Frame = +3
Query: 498 AKTPXXPXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXR 677
A P P P P G P PPG G G PG R
Sbjct: 142 AGAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSR 201
Query: 678 GGXGFSXHXGGFXXPRGXXXPPPXPPXGGXGXSXLXXAXPP 800
G G S G P+G PP P G G S A PP
Sbjct: 202 GLPGPSGRPG----PQG---PPGAPGQPGSG-STPGPAGPP 234
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 582 GGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFSXHXGGFXXPRGXXXPPPXPP 755
GG G G G G GG S GG+ P PPP PP
Sbjct: 252 GGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 582 GGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFSXHXGGFXXPRGXXXPPPXPP 755
GG G G G G GG S GG+ P PPP PP
Sbjct: 252 GGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/101 (25%), Positives = 29/101 (28%), Gaps = 5/101 (4%)
Frame = +3
Query: 516 PXPXXPGGXKIPPDXXPXXXPP---GGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGX 686
P P P G P P GG PG + G PG P RGG
Sbjct: 139 PGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQ 198
Query: 687 GFSXHXG--GFXXPRGXXXPPPXPPXGGXGXSXLXXAXPPP 803
G G P+G P P G + P P
Sbjct: 199 RSRGTPGASGRPGPQGPAGAPGQPGRSGGAGTPGPQGPPGP 239
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/83 (26%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXP 584
P G G P +PP P P P PG P PG P
Sbjct: 104 PGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGP 163
Query: 583 PGGXXXGXXSG--GILXPPGXXG 521
G G G + PPG G
Sbjct: 164 KGPDAAPGEPGPKGPIGPPGPPG 186
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 7.5
Identities = 29/104 (27%), Positives = 31/104 (29%), Gaps = 6/104 (5%)
Frame = -1
Query: 763 PPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXP 584
P G G P KPP P P P PG P PG P
Sbjct: 115 PGTPGRPGAPGAPGHPGKPPQSPCEPLTP------PPCPACPPGPPGAPGAPGKPGSEGP 168
Query: 583 PGGXXXGXXSGGILXP--PGXXG----XGXXGVXAPLNFQGNED 470
PG +GG P PG G G G P G+ D
Sbjct: 169 PGPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSD 212
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 739 GXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXPPG 578
G PRG PP P G P PG P PG PPG
Sbjct: 218 GPPGPRGPKGPPGSNGLPSQ-NSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPG 270
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 739 GXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXXXPPG 578
G PRG PP P G P PG P PG PPG
Sbjct: 218 GPPGPRGPKGPPGSNGLPSQ-NSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPG 270
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Frame = -1
Query: 763 PPXGGXGG--GXXXPRGXXKPPXCXEXPXPP-RXGXEXPXFXXXXPGTPXXXKXXXXPGX 593
P G G G P+G P P P G + P PG P PG
Sbjct: 192 PGRNGPDGPNGEPGPKGPPGQPGADGQPGMPGEPGKDAPQEGSPVPGDPGPPGDSGIPGP 251
Query: 592 XXPPG 578
PPG
Sbjct: 252 PGPPG 256
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/88 (26%), Positives = 24/88 (27%), Gaps = 5/88 (5%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPPRXGXEXPXFXXXXPGTPXXXKXXXXPGXX 590
P PP G +G PP P P E PG P PG
Sbjct: 163 PGPPGPEGPNGEPGNKGPAGPPGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPGQPGQR 222
Query: 589 XPPG-----GXXXGXXSGGILXPPGXXG 521
P G G G G PG G
Sbjct: 223 GPAGEPGKDGSPGGQGEKGASGEPGQPG 250
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 27.9 bits (59), Expect = 9.9
Identities = 23/84 (27%), Positives = 23/84 (27%), Gaps = 1/84 (1%)
Frame = -1
Query: 769 PXPPXGGXGGGXXXPRGXXKPPXCXEXPXPP-RXGXEXPXFXXXXPGTPXXXKXXXXPGX 593
P PP G P G P P PP G P GTP
Sbjct: 160 PGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTY 219
Query: 592 XXPPGGXXXGXXSGGILXPPGXXG 521
P G G G PPG G
Sbjct: 220 PEPAGPGPAGPP--GPAGPPGPDG 241
>Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical
protein K08C9.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/80 (23%), Positives = 22/80 (27%)
Frame = +3
Query: 531 PGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRGGXGFSXHXGG 710
P G P PG PG G PG + + G + G
Sbjct: 138 PAGAPGPAGPDGEAGAPGPDGQPGQDGPAGIDGAPGEAGPQGDAGAAGQDGEAGAPGPAG 197
Query: 711 FXXPRGXXXPPPXPPXGGXG 770
RG P P P G G
Sbjct: 198 KNGQRGQGAPGPQGPEGPAG 217
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/77 (27%), Positives = 21/77 (27%), Gaps = 4/77 (5%)
Frame = -1
Query: 739 GXXXPRGXXKPPXCXEXPXPP----RXGXEXPXFXXXXPGTPXXXKXXXXPGXXXPPGGX 572
G P G PP P P G P PG P PG PG
Sbjct: 172 GPAGPAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAV 231
Query: 571 XXGXXSGGILXPPGXXG 521
G PPG G
Sbjct: 232 TEVPGQQGPPGPPGPAG 248
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 27.9 bits (59), Expect = 9.9
Identities = 28/102 (27%), Positives = 30/102 (29%)
Frame = +3
Query: 498 AKTPXXPXPXXPGGXKIPPDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXR 677
A P P P P G P PPG G G PG R
Sbjct: 144 AGVPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGR 203
Query: 678 GGXGFSXHXGGFXXPRGXXXPPPXPPXGGXGXSXLXXAXPPP 803
G G S G P+G PP P G G + P P
Sbjct: 204 GLPGPS----GAPGPQG---PPGAPGQPGSGNAPGPAGPPGP 238
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 27.9 bits (59), Expect = 9.9
Identities = 25/90 (27%), Positives = 25/90 (27%), Gaps = 5/90 (5%)
Frame = +3
Query: 516 PXPXXPGGXKIP-----PDXXPXXXPPGGXXXPGXQXXFXFXGVPGXXXXKXGXSXPXRG 680
P P P G P PD P PG PG G G G P R
Sbjct: 151 PGPAGPAGSAGPAGPKGPDGRPGQ--PGSAGHPGAPGQPGSKGNNGAPGAAGGPGQPGRP 208
Query: 681 GXGFSXHXGGFXXPRGXXXPPPXPPXGGXG 770
G G P P P GG G
Sbjct: 209 GKDGQRGKGSAGAPGAPGKAGPAGPAGGPG 238
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +3
Query: 627 GVPGXXXXKXGXSXPXRGGXGFSXHXGGFXXPRGXXXPPPXPPXGGXG 770
G+P G GG G S GG PPP PP GG G
Sbjct: 179 GLPPSNDFGPGGGGGGMGGGGGSGGSGG----GSGRFPPPPPPYGGGG 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,263,293
Number of Sequences: 27780
Number of extensions: 340078
Number of successful extensions: 1934
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -