Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_D09
         (823 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   1.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    22   2.4  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   3.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.6 bits (46), Expect(2) = 1.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 537 PXPXXPPPPP 566
           P P  PPPPP
Sbjct: 581 PPPAPPPPPP 590



 Score = 21.0 bits (42), Expect(2) = 1.9
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +3

Query: 543 PXXPPPPPXQXRXP 584
           P  PPPPP     P
Sbjct: 582 PPAPPPPPPMGPPP 595


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.8 bits (44), Expect(2) = 2.4
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = +3

Query: 543 PXXPPPPPXQXRXPXXXXXP 602
           P  PPPPP     P     P
Sbjct: 783 PPPPPPPPPSSLSPGGVPRP 802



 Score = 21.4 bits (43), Expect(2) = 2.4
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 516 AXXXGXXPXPXXPPPPP 566
           A   G    P  PPPPP
Sbjct: 775 AFADGIGSPPPPPPPPP 791


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 54   FYNITSQEHGTSIRGRDCSMDPLDC 128
            F NITS+   ++   ++C+ D LDC
Sbjct: 930  FINITSKCTASTTCKKNCASDELDC 954


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,317
Number of Sequences: 2352
Number of extensions: 4576
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)