Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_D08
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 137 7e-33
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 137 7e-33
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 132 2e-31
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 132 2e-31
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80219-6|CAI70409.1| 734|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80219-4|CAE17938.1| 745|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z80219-1|CAB02301.2| 727|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical p... 29 3.7
Z75546-11|CAI70402.1| 734|Caenorhabditis elegans Hypothetical p... 29 3.7
Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical p... 29 3.7
Z75546-9|CAE17895.1| 745|Caenorhabditis elegans Hypothetical pr... 29 3.7
U13019-10|AAC24442.1| 757|Caenorhabditis elegans Hypothetical p... 29 4.9
AC006748-4|AAF60512.2| 371|Caenorhabditis elegans Hypothetical ... 29 4.9
AF003384-10|AAB54241.3| 351|Caenorhabditis elegans Hypothetical... 28 8.6
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 137 bits (332), Expect = 7e-33
Identities = 68/135 (50%), Positives = 85/135 (62%)
Frame = -1
Query: 781 EKXRXESERTXPTAASITGQSRRQHGVXGFNARQRKSFLNAIMRYGCXXXXXXXXSG**E 602
+K R + E+ P A + GQ + GFN RQRK+F A+MR+G
Sbjct: 1277 KKRRRDEEKMPPLMAKVNGQVE----ILGFNPRQRKAFYGAVMRWGMPPQDSHQSQWLVR 1332
Query: 601 ICAGSLSATFKAYVSLFMRHLCEPGADNAETFADGVPREGLSRQHVLTRIGVMSLIRKKV 422
F+AY SLFMRHLCEPGAD +TF DGVPREGL+RQHVL RIG++SL+R+KV
Sbjct: 1333 DLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLGRIGLLSLVRRKV 1392
Query: 421 QEFEHINGYYSMPEL 377
QEFE NG +SMPE+
Sbjct: 1393 QEFEQYNGQWSMPEI 1407
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 137 bits (332), Expect = 7e-33
Identities = 68/135 (50%), Positives = 85/135 (62%)
Frame = -1
Query: 781 EKXRXESERTXPTAASITGQSRRQHGVXGFNARQRKSFLNAIMRYGCXXXXXXXXSG**E 602
+K R + E+ P A + GQ + GFN RQRK+F A+MR+G
Sbjct: 1277 KKRRRDEEKMPPLMAKVNGQVE----ILGFNPRQRKAFYGAVMRWGMPPQDSHQSQWLVR 1332
Query: 601 ICAGSLSATFKAYVSLFMRHLCEPGADNAETFADGVPREGLSRQHVLTRIGVMSLIRKKV 422
F+AY SLFMRHLCEPGAD +TF DGVPREGL+RQHVL RIG++SL+R+KV
Sbjct: 1333 DLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLGRIGLLSLVRRKV 1392
Query: 421 QEFEHINGYYSMPEL 377
QEFE NG +SMPE+
Sbjct: 1393 QEFEQYNGQWSMPEI 1407
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 132 bits (320), Expect = 2e-31
Identities = 70/132 (53%), Positives = 84/132 (63%)
Frame = -1
Query: 763 SERTXPTAASITGQSRRQHGVXGFNARQRKSFLNAIMRYGCXXXXXXXXSG**EICAGSL 584
SE+ P A + GQ V GFN RQRK+F NA+MR+G S
Sbjct: 1295 SEKLPPLLAKVNGQIE----VLGFNPRQRKAFYNAVMRWGMPPQDLTQSSWQVRDLRNKS 1350
Query: 583 SATFKAYVSLFMRHLCEPGADNAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHI 404
FKAY SLFMRHLCEP DN+++F DGVPREGL+RQ VL+RIG+MS++RKKVQEFE
Sbjct: 1351 EKVFKAYSSLFMRHLCEPVVDNSDSFMDGVPREGLNRQAVLSRIGLMSILRKKVQEFEKF 1410
Query: 403 NGYYSMPELVRK 368
NG +SMPE K
Sbjct: 1411 NGEWSMPETREK 1422
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 132 bits (320), Expect = 2e-31
Identities = 70/132 (53%), Positives = 84/132 (63%)
Frame = -1
Query: 763 SERTXPTAASITGQSRRQHGVXGFNARQRKSFLNAIMRYGCXXXXXXXXSG**EICAGSL 584
SE+ P A + GQ V GFN RQRK+F NA+MR+G S
Sbjct: 1295 SEKLPPLLAKVNGQIE----VLGFNPRQRKAFYNAVMRWGMPPQDLTQSSWQVRDLRNKS 1350
Query: 583 SATFKAYVSLFMRHLCEPGADNAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHI 404
FKAY SLFMRHLCEP DN+++F DGVPREGL+RQ VL+RIG+MS++RKKVQEFE
Sbjct: 1351 EKVFKAYSSLFMRHLCEPVVDNSDSFMDGVPREGLNRQAVLSRIGLMSILRKKVQEFEKF 1410
Query: 403 NGYYSMPELVRK 368
NG +SMPE K
Sbjct: 1411 NGEWSMPETREK 1422
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 132 bits (320), Expect = 2e-31
Identities = 70/132 (53%), Positives = 84/132 (63%)
Frame = -1
Query: 763 SERTXPTAASITGQSRRQHGVXGFNARQRKSFLNAIMRYGCXXXXXXXXSG**EICAGSL 584
SE+ P A + GQ V GFN RQRK+F NA+MR+G S
Sbjct: 1295 SEKLPPLLAKVNGQIE----VLGFNPRQRKAFYNAVMRWGMPPQDLTQSSWQVRDLRNKS 1350
Query: 583 SATFKAYVSLFMRHLCEPGADNAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHI 404
FKAY SLFMRHLCEP DN+++F DGVPREGL+RQ VL+RIG+MS++RKKVQEFE
Sbjct: 1351 EKVFKAYSSLFMRHLCEPVVDNSDSFMDGVPREGLNRQAVLSRIGLMSILRKKVQEFEKF 1410
Query: 403 NGYYSMPELVRK 368
NG +SMPE K
Sbjct: 1411 NGEWSMPETREK 1422
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = -3
Query: 560 VLVHAPSLRTGRRQRGNICGRRSEGRIIPSARFDTNRGNEFDQEKGSGIRTHQRVLQHAG 381
VL AP + G G + G+ F+ EK +G+ L H G
Sbjct: 31 VLASAPQAEVTTLKNGFRVVTEDNGSATATVGVWIETGSRFENEKNNGVAHFLERLIHKG 90
Query: 380 TGEKTS*AGES 348
TG++ S A ES
Sbjct: 91 TGKRASAALES 101
>Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3
Query: 680 EEVIPQCYHAVRMPPQDAFNSQWLVRDLRGKSERNFQGLRVLVHAPSLRTGRRQR 516
E+ P+ + +++ Q +F +LVR +RG+ + ++VL A +L+ RQR
Sbjct: 91 EKADPRQFELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKA-TLKVRDRQR 144
>Z80219-6|CAI70409.1| 734|Caenorhabditis elegans Hypothetical
protein T01H8.1d protein.
Length = 734
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3
Query: 680 EEVIPQCYHAVRMPPQDAFNSQWLVRDLRGKSERNFQGLRVLVHAPSLRTGRRQR 516
E+ P+ + +++ Q +F +LVR +RG+ + ++VL A +L+ RQR
Sbjct: 78 EKADPRQFELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKA-TLKVRDRQR 131
>Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3
Query: 680 EEVIPQCYHAVRMPPQDAFNSQWLVRDLRGKSERNFQGLRVLVHAPSLRTGRRQR 516
E+ P+ + +++ Q +F +LVR +RG+ + ++VL A +L+ RQR
Sbjct: 97 EKADPRQFELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKA-TLKVRDRQR 150
>Z80219-4|CAE17938.1| 745|Caenorhabditis elegans Hypothetical
protein T01H8.1c protein.
Length = 745
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3
Query: 680 EEVIPQCYHAVRMPPQDAFNSQWLVRDLRGKSERNFQGLRVLVHAPSLRTGRRQR 516
E+ P+ + +++ Q +F +LVR +RG+ + ++VL A +L+ RQR
Sbjct: 58 EKADPRQFELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKA-TLKVRDRQR 111
>Z80219-1|CAB02301.2| 727|Caenorhabditis elegans Hypothetical
protein T01H8.1b protein.
Length = 727
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3
Query: 680 EEVIPQCYHAVRMPPQDAFNSQWLVRDLRGKSERNFQGLRVLVHAPSLRTGRRQR 516
E+ P+ + +++ Q +F +LVR +RG+ + ++VL A +L+ RQR
Sbjct: 40 EKADPRQFELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKA-TLKVRDRQR 93
>Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3
Query: 680 EEVIPQCYHAVRMPPQDAFNSQWLVRDLRGKSERNFQGLRVLVHAPSLRTGRRQR 516
E+ P+ + +++ Q +F +LVR +RG+ + ++VL A +L+ RQR
Sbjct: 91 EKADPRQFELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKA-TLKVRDRQR 144
>Z75546-11|CAI70402.1| 734|Caenorhabditis elegans Hypothetical
protein T01H8.1d protein.
Length = 734
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3
Query: 680 EEVIPQCYHAVRMPPQDAFNSQWLVRDLRGKSERNFQGLRVLVHAPSLRTGRRQR 516
E+ P+ + +++ Q +F +LVR +RG+ + ++VL A +L+ RQR
Sbjct: 78 EKADPRQFELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKA-TLKVRDRQR 131
>Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3
Query: 680 EEVIPQCYHAVRMPPQDAFNSQWLVRDLRGKSERNFQGLRVLVHAPSLRTGRRQR 516
E+ P+ + +++ Q +F +LVR +RG+ + ++VL A +L+ RQR
Sbjct: 97 EKADPRQFELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKA-TLKVRDRQR 150
>Z75546-9|CAE17895.1| 745|Caenorhabditis elegans Hypothetical
protein T01H8.1c protein.
Length = 745
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3
Query: 680 EEVIPQCYHAVRMPPQDAFNSQWLVRDLRGKSERNFQGLRVLVHAPSLRTGRRQR 516
E+ P+ + +++ Q +F +LVR +RG+ + ++VL A +L+ RQR
Sbjct: 58 EKADPRQFELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKA-TLKVRDRQR 111
>U13019-10|AAC24442.1| 757|Caenorhabditis elegans Hypothetical
protein T12A2.2 protein.
Length = 757
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 365 WFSHQFRHAVVPVDVFEFLNLFPDQTHYP 451
WF+++ H +V ++FLN F ++ YP
Sbjct: 53 WFNYRATHHMVQHGFYKFLNWFDERAWYP 81
>AC006748-4|AAF60512.2| 371|Caenorhabditis elegans Hypothetical
protein Y39A3B.1 protein.
Length = 371
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 521 QRGNICGRRSEGRIIPSARFDTNRGNEFDQEKGSGI 414
Q+G G ++ +I SA +DT GN+ + GSG+
Sbjct: 87 QKGPYFGTGNDKMMILSANYDTLEGNQGVDDNGSGV 122
>AF003384-10|AAB54241.3| 351|Caenorhabditis elegans Hypothetical
protein K07B1.7a protein.
Length = 351
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = -3
Query: 593 GKSERNFQGLRVLVHAPSLRTGRRQRGNICGRRSEGRIIPSARFDTNRGNEFDQEKGSGI 414
G SE+ + L+ + L + G G+ +GR++P A + G ++ G G
Sbjct: 234 GSSEKASENLQKGIGGSMLAKMGWKPGTGLGKNEQGRVVPVAVYVEEDGQSSKEKTGFGY 293
Query: 413 RTHQ--RVLQHAGTGEKTS*AGESVWGE*EC 327
R + RV+Q + A +SV +C
Sbjct: 294 RGEKLSRVVQKKTIRHVIASAFDSVTDREQC 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,235,856
Number of Sequences: 27780
Number of extensions: 218830
Number of successful extensions: 587
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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