Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_D03
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0252 - 16191136-16191279,16191639-16191750,16191833-161919... 93 3e-19
01_06_0515 - 29959149-29959253,29959510-29959633,29959702-299597... 69 3e-12
03_02_0994 - 13067254-13067379,13067483-13067521,13067824-130678... 66 2e-11
12_02_0648 + 21490202-21490296,21490547-21490634,21491216-214912... 49 4e-06
05_07_0028 + 27153663-27153932,27154966-27155175,27156220-271564... 42 5e-04
01_06_0319 - 28441082-28441102,28441630-28441701,28442568-284426... 42 7e-04
03_01_0325 + 2529875-2529922,2530181-2530279,2530958-2531055,253... 38 0.009
01_01_0795 - 6187518-6188219 33 0.34
06_01_0063 - 534138-534605 32 0.59
06_01_0611 + 4420873-4422207 30 1.8
07_01_0422 + 3220988-3221536 30 2.4
06_03_0341 + 19716846-19717349 30 2.4
03_06_0231 + 32522898-32523524 30 2.4
02_02_0262 - 8396755-8397244,8398659-8398705 29 4.1
08_02_0022 + 11320299-11320637 28 7.2
12_01_0652 - 5512187-5512273,5512844-5513950 28 9.6
09_04_0192 + 15478270-15480257,15480358-15480640,15480727-15481116 28 9.6
08_02_1103 - 24329120-24329623 28 9.6
07_01_0766 - 5885207-5885791,5885874-5886224,5886252-5886269,588... 28 9.6
03_06_0389 - 33567385-33567969,33568052-33568402,33568646-335688... 28 9.6
02_05_0076 + 25637752-25639062,25639221-25639297,25640962-256410... 28 9.6
>10_08_0252 -
16191136-16191279,16191639-16191750,16191833-16191924,
16192564-16192641,16192764-16192796,16193712-16193771,
16193912-16193999,16194155-16194180
Length = 210
Score = 92.7 bits (220), Expect = 3e-19
Identities = 42/91 (46%), Positives = 47/91 (51%)
Frame = -1
Query: 587 CGHLXHRPXXEQXXHSGXYACPTCQTSMIDMSNLWNYLDSEVAATPMPSEYADYKATILC 408
CGH H +ACP C S DMS+ W LD EVAATPMP Y ILC
Sbjct: 109 CGHTIHLECLNVMRAHHHFACPVCSRSACDMSDAWKKLDEEVAATPMPEFYQKKMIWILC 168
Query: 407 KDCHKLSTVKFHVVGLKCQHCGAYNTCQTNG 315
DC S V FHV+ KC C +YNT +T G
Sbjct: 169 NDCGATSNVNFHVLAQKCPGCSSYNTRETRG 199
>01_06_0515 -
29959149-29959253,29959510-29959633,29959702-29959793,
29959921-29960003,29960573-29960654,29960707-29960784,
29960875-29960967,29961647-29961734,29961822-29961991
Length = 304
Score = 69.3 bits (162), Expect = 3e-12
Identities = 39/95 (41%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Frame = -1
Query: 587 CGHLXH-RPXXEQXXHSGX-----YACPTCQTSMIDMSNLWNYLDSEVAATPMPSEYADY 426
CGH H + E H +ACP C S+ DMS W LD E+A S+ D
Sbjct: 212 CGHTIHVKCLREMEEHCHLKLMLRFACPLCSKSVCDMSKAWERLDEELATI---SDTCDN 268
Query: 425 KAT-ILCKDCHKLSTVKFHVVGLKCQHCGAYNTCQ 324
K ILC DC S V+FH++ KCQ C +YNT Q
Sbjct: 269 KMVRILCNDCGATSEVQFHLIAHKCQKCKSYNTRQ 303
>03_02_0994 -
13067254-13067379,13067483-13067521,13067824-13067893,
13068025-13068116,13068237-13068319,13068590-13068633,
13068682-13068800,13068883-13068915,13069152-13069239,
13069364-13069413
Length = 247
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/88 (32%), Positives = 42/88 (47%)
Frame = -1
Query: 587 CGHLXHRPXXEQXXHSGXYACPTCQTSMIDMSNLWNYLDSEVAATPMPSEYADYKATILC 408
CGH H + ++CP C + DM LD+E+ A + +Y K I+C
Sbjct: 153 CGHTMHLQCFHEMLKHDKFSCPICSMPIFDMDKFLRALDAEIEANMLHIDYMG-KGWIVC 211
Query: 407 KDCHKLSTVKFHVVGLKCQHCGAYNTCQ 324
DC + V V G KC HC ++NTC+
Sbjct: 212 NDCRDTTQVYARVAGHKCCHCQSHNTCR 239
>12_02_0648 +
21490202-21490296,21490547-21490634,21491216-21491260,
21491355-21491387,21491480-21491557,21491647-21491690,
21491765-21491805,21492102-21492184,21492261-21492352,
21492468-21492537,21492838-21492876,21493670-21493687,
21494586-21494713,21495235-21495358,21495585-21495716,
21496092-21496223,21496582-21496665
Length = 441
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -1
Query: 587 CGHLXHRPXXEQXXHSGXYACPTCQTSMIDMSNLWNYLDSEVAATPMPSEY 435
CGH H + Y CP C + +DM++ W LD E+ AT MP Y
Sbjct: 183 CGHTMHMECFSEMVEHNKYTCPICSKTALDMTHHWALLDQEIEATIMPPVY 233
>05_07_0028 + 27153663-27153932,27154966-27155175,27156220-27156414,
27156491-27156840,27157198-27157423,27157524-27157692,
27158145-27158990,27159647-27159818,27159934-27160052,
27160117-27160155,27161033-27161157,27161250-27161309,
27161471-27161542,27161980-27162114
Length = 995
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -1
Query: 587 CGHLXHRPXXEQXXHSGXYACPTCQTSMIDMSNLWNYLDSEVAATPMPSEYAD 429
CGH H + S Y CP C S+ DM+ + LD +AA +P EY D
Sbjct: 897 CGHFMHSACFQAYTCS-HYTCPICSKSLGDMTVYFGMLDGLLAAEELPEEYRD 948
>01_06_0319 - 28441082-28441102,28441630-28441701,28442568-28442627,
28442918-28443105,28444300-28444327,28444880-28444907,
28444942-28445163,28445238-28445409,28446224-28447468,
28447573-28447741,28447820-28448045,28449096-28449451,
28449530-28449724,28450655-28450864,28451729-28452004
Length = 1155
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = -1
Query: 623 IHTSRIPCHIPXCGHLXHRPXXEQXXHSGXYACPTCQTSMIDMSNLWNYLDSEVAATPMP 444
+ TS CGH H + S Y CP C S+ DM+ + LD+ +AA +P
Sbjct: 1083 LFTSSAAVRALPCGHFMHSACFQAYTCS-HYTCPICCKSLGDMAVYFGMLDALLAAEELP 1141
Query: 443 SEYAD 429
EY D
Sbjct: 1142 EEYRD 1146
>03_01_0325 +
2529875-2529922,2530181-2530279,2530958-2531055,
2531945-2532031,2532652-2532684,2532813-2532890,
2533059-2533183,2533267-2533349,2533436-2533527,
2533611-2533680,2533760-2533829,2533919-2534073
Length = 345
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 587 CGHLXHRPXXEQXXHSGXYACPTCQTSMIDMSNLWNYLDSE 465
CGH H + ++CP C S DMS+ W LD E
Sbjct: 231 CGHTIHLECLYEMRSHQQFSCPVCLRSACDMSHAWQKLDQE 271
>01_01_0795 - 6187518-6188219
Length = 233
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -1
Query: 596 IPXCGHLXHRPXXEQXXHSGXYACPTCQTSMIDMSNLWNYLDSEVAATP 450
+P CGH+ HR + S +CP C+ L + + + +A TP
Sbjct: 133 LPACGHVFHRECIDMWL-SSRASCPVCRGKAAPADELADAIVARIAVTP 180
>06_01_0063 - 534138-534605
Length = 155
Score = 31.9 bits (69), Expect = 0.59
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 626 DIHTSRIPCHIPXCGHLXHRPXXEQXXHSGXYACPTCQTSMIDMS 492
D H S C H+ HR + H G CP C++ ++ S
Sbjct: 98 DFHKSAQVRRAHRCRHVFHRACLDAWAHHGHRTCPLCRSPLLPSS 142
>06_01_0611 + 4420873-4422207
Length = 444
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -1
Query: 596 IPXCGHLXHRPXXEQXXHSGXYACPTCQTSMIDMSNLWNYLDSEVAATPMPSEYAD 429
+P CGH H P + S CP C+ S++ + + D A+TP+ D
Sbjct: 139 LPTCGHAFHVPCIDAWLLS-HSTCPICRGSVLAAAAAADDDDDSSASTPVARRVLD 193
>07_01_0422 + 3220988-3221536
Length = 182
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 596 IPXCGHLXHRPXXEQXXHSGXYACPTCQTS 507
+P CGHL HR + CP C+TS
Sbjct: 132 LPDCGHLFHRECVDPWLRQRP-TCPVCRTS 160
>06_03_0341 + 19716846-19717349
Length = 167
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = -1
Query: 629 GDIHTSRIPCHIPXCGHLXHRPXXEQXXHSGXYACPTCQT 510
G++ ++ +P C HL H ++ + CP C+T
Sbjct: 109 GEVRRGQVVKQLPACTHLFHARCIDKWLITSQGTCPVCRT 148
>03_06_0231 + 32522898-32523524
Length = 208
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 596 IPXCGHLXHRPXXEQXXHSGXYACPTCQTS 507
+P CGHL HR + CP C+TS
Sbjct: 158 LPECGHLFHRECVDPWLRQHP-TCPVCRTS 186
>02_02_0262 - 8396755-8397244,8398659-8398705
Length = 178
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 626 DIHTSRIPCHIPXCGHLXHRPXXEQXXHSGXYACPTCQTSM 504
++H I +P C HL H + HS CP C+ +
Sbjct: 111 ELHAGEIVREMPACKHLFHVECIDMWLHS-HRTCPMCRCDL 150
>08_02_0022 + 11320299-11320637
Length = 112
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 88 KNADEHRLGAACGLGRIVLAVARAGQAWGGSSSG 189
+ AD H G A +G ++ AVAR G GG G
Sbjct: 20 RGADVHVAGGAGIVGNMMPAVARGGGGGGGGGGG 53
>12_01_0652 - 5512187-5512273,5512844-5513950
Length = 397
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1
Query: 497 MSNLWNYLDSEVAATPMPSEYADYKATIL 411
+ +LWNY+D E P+P + + +L
Sbjct: 288 LDDLWNYIDLEAVGIPLPLGRGNQRKVVL 316
>09_04_0192 + 15478270-15480257,15480358-15480640,15480727-15481116
Length = 886
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 212 HHDLPTANP-LDEPPQA*PALATARTIRPKPQAAPRR 105
H + T NP L PP ALA+ P P+ +PRR
Sbjct: 13 HEEHETPNPSLTPPPMQLAALASDEPPPPPPEQSPRR 49
>08_02_1103 - 24329120-24329623
Length = 167
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 587 CGHLXHRPXXEQXXHSGXYACPTCQTSMI 501
CGHL HR E+ CP C+ ++
Sbjct: 118 CGHLFHRACLEKWLDYDHATCPLCRHRLL 146
>07_01_0766 -
5885207-5885791,5885874-5886224,5886252-5886269,
5886339-5886541,5886632-5886890,5887052-5887264,
5887357-5887482,5887590-5887727,5887817-5888162,
5888254-5888520,5888983-5889172,5889264-5889363,
5889444-5889694,5889990-5890182,5890313-5890336
Length = 1087
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -1
Query: 629 GDIHTSRIPCHIPXCGHLXHRPXXEQXXHSGXYACPTCQT 510
GD+ + C P C RP E G ACP C+T
Sbjct: 32 GDVFAACDVCGFPVC-----RPCYEYERKDGTQACPQCKT 66
>03_06_0389 -
33567385-33567969,33568052-33568402,33568646-33568848,
33569044-33569299,33569459-33569671,33569757-33569882,
33569965-33570102,33570191-33570536,33570630-33570896,
33571192-33571378,33571457-33571556,33571659-33571909,
33572242-33572428,33572562-33572573
Length = 1073
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 629 GDIHTSRIPCHIPXCGHLXHRPXXEQXXHSGXYACPTCQT 510
G++ T+ C P C RP E G ACP C+T
Sbjct: 26 GELFTACDVCGFPVC-----RPCYEYERKDGSQACPQCKT 60
>02_05_0076 +
25637752-25639062,25639221-25639297,25640962-25641095,
25641178-25641242,25641431-25641482,25641912-25641994,
25642128-25642221,25642332-25642861
Length = 781
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 413 VSWPCSRRTRTASVWP 460
VSWPC+ T T+ WP
Sbjct: 670 VSWPCASSTMTSREWP 685
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,387,807
Number of Sequences: 37544
Number of extensions: 261056
Number of successful extensions: 926
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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