Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_D01
         (768 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D83175-1|BAA82509.1|  349|Homo sapiens WNT7a protein.                  31   6.0  
AF037351-1|AAC09251.1|  388|Homo sapiens macrophage scavenger re...    30   7.9  

>D83175-1|BAA82509.1|  349|Homo sapiens WNT7a protein.
          Length = 349

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 224 SRRSMLSVFFLTRASRLRRSGYNSVRCSGLGIVCRRLPFLA 102
           +RR +  +FF      LR  G++SV   G  I+C ++P LA
Sbjct: 5   ARRCLGHLFFSLGMVYLRIGGFSSVVALGASIICNKIPGLA 45


>AF037351-1|AAC09251.1|  388|Homo sapiens macrophage scavenger
           receptor type III protein.
          Length = 388

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 17/62 (27%), Positives = 23/62 (37%)
 Frame = -1

Query: 387 GXXXPPPXPGNSGXREXVSLLGAPENSGRXLNNGTLXSRVSHSKRXTRRRSPIWIAEIDA 208
           G   PP   G+ G        G P  +GR  N+G    +       T    PIW+ E+  
Sbjct: 297 GPIGPPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLSTGPIWLNEVFC 356

Query: 207 IG 202
            G
Sbjct: 357 FG 358


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,336,684
Number of Sequences: 237096
Number of extensions: 1671759
Number of successful extensions: 3813
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3806
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)