Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_C24
(875 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008368-1|AAH08368.1| 706|Homo sapiens chromosome 12 open read... 76 2e-13
BC003081-1|AAH03081.1| 706|Homo sapiens chromosome 12 open read... 76 2e-13
AK001499-1|BAA91725.1| 706|Homo sapiens protein ( Homo sapiens ... 76 2e-13
AK001492-1|BAA91721.1| 706|Homo sapiens protein ( Homo sapiens ... 76 2e-13
AY211927-1|AAO65180.1| 151|Homo sapiens sarcoma antigen NY-SAR-... 74 6e-13
AK001222-1|BAA91565.1| 294|Homo sapiens protein ( Homo sapiens ... 41 0.005
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 31 5.5
AK128829-1|BAC87629.1| 385|Homo sapiens protein ( Homo sapiens ... 31 5.5
>BC008368-1|AAH08368.1| 706|Homo sapiens chromosome 12 open reading
frame 11 protein.
Length = 706
Score = 75.8 bits (178), Expect = 2e-13
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Frame = -2
Query: 448 WRVTPXXVASRPSACLVNFXLNGRSVTLEVPRKGGGRSASHVLAAQGGELWIGXPGGSDH 269
+R++P V SRPS+CL NF LNGRSV LE PRK G + SH+L++ GGE+++ S
Sbjct: 335 YRISPVDVNSRPSSCLTNFLLNGRSVLLEQPRKSGSKVISHMLSSHGGEIFLHVLSSSRS 394
Query: 268 VRRSPRALR---GGRWTRHRLQNKRVWCTDAAK*AAPTPRGGVQRTREVSAAKAHDIL 104
+ P ++ GGR T +R+ + + + PR + + EV +A D L
Sbjct: 395 ILEDPPSISEGCGGRVTDYRITDFGEFMRENRLTPFLDPRYKIDGSLEVPLERAKDQL 452
Score = 72.5 bits (170), Expect = 2e-12
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Frame = -3
Query: 276 RTTYDDPPALSEGAGGRVTDYRIKEFGALMQQNKLHPLXXXXXXXXXXXR---------L 124
R+ +DPP++SEG GGRVTDYRI +FG M++N+L P L
Sbjct: 393 RSILEDPPSISEGCGGRVTDYRITDFGEFMRENRLTPFLDPRYKIDGSLEVPLERAKDQL 452
Query: 123 QRHTTYWPLTISSTLIFNLGSVM 55
++HT YWP+ IS T IFN+ +V+
Sbjct: 453 EKHTRYWPMIISQTTIFNMQAVV 475
>BC003081-1|AAH03081.1| 706|Homo sapiens chromosome 12 open reading
frame 11 protein.
Length = 706
Score = 75.8 bits (178), Expect = 2e-13
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Frame = -2
Query: 448 WRVTPXXVASRPSACLVNFXLNGRSVTLEVPRKGGGRSASHVLAAQGGELWIGXPGGSDH 269
+R++P V SRPS+CL NF LNGRSV LE PRK G + SH+L++ GGE+++ S
Sbjct: 335 YRISPVDVNSRPSSCLTNFLLNGRSVLLEQPRKSGSKVISHMLSSHGGEIFLHVLSSSRS 394
Query: 268 VRRSPRALR---GGRWTRHRLQNKRVWCTDAAK*AAPTPRGGVQRTREVSAAKAHDIL 104
+ P ++ GGR T +R+ + + + PR + + EV +A D L
Sbjct: 395 ILEDPPSISEGCGGRVTDYRITDFGEFMRENRLTPFLDPRYKIDGSLEVPLERAKDQL 452
Score = 72.5 bits (170), Expect = 2e-12
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Frame = -3
Query: 276 RTTYDDPPALSEGAGGRVTDYRIKEFGALMQQNKLHPLXXXXXXXXXXXR---------L 124
R+ +DPP++SEG GGRVTDYRI +FG M++N+L P L
Sbjct: 393 RSILEDPPSISEGCGGRVTDYRITDFGEFMRENRLTPFLDPRYKIDGSLEVPLERAKDQL 452
Query: 123 QRHTTYWPLTISSTLIFNLGSVM 55
++HT YWP+ IS T IFN+ +V+
Sbjct: 453 EKHTRYWPMIISQTTIFNMQAVV 475
>AK001499-1|BAA91725.1| 706|Homo sapiens protein ( Homo sapiens
cDNA FLJ10637 fis, clone NT2RP2005683. ).
Length = 706
Score = 75.8 bits (178), Expect = 2e-13
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Frame = -2
Query: 448 WRVTPXXVASRPSACLVNFXLNGRSVTLEVPRKGGGRSASHVLAAQGGELWIGXPGGSDH 269
+R++P V SRPS+CL NF LNGRSV LE PRK G + SH+L++ GGE+++ S
Sbjct: 335 YRISPVDVNSRPSSCLTNFLLNGRSVLLEQPRKSGSKVISHMLSSHGGEIFLHVLSSSRS 394
Query: 268 VRRSPRALR---GGRWTRHRLQNKRVWCTDAAK*AAPTPRGGVQRTREVSAAKAHDIL 104
+ P ++ GGR T +R+ + + + PR + + EV +A D L
Sbjct: 395 ILEDPPSISEGCGGRVTDYRITDFGEFMRENRLTPFLDPRYKIDGSLEVPLERAKDQL 452
Score = 66.9 bits (156), Expect = 9e-11
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Frame = -3
Query: 276 RTTYDDPPALSEGAGGRVTDYRIKEFGALMQQNKLHPLXXXXXXXXXXXR---------L 124
R+ +DPP++SEG GGRVTDYRI +FG M++N+L P L
Sbjct: 393 RSILEDPPSISEGCGGRVTDYRITDFGEFMRENRLTPFLDPRYKIDGSLEVPLERAKDQL 452
Query: 123 QRHTTYWPLTISSTLIFNLGSVM 55
++HT Y P+ IS T IFN+ +V+
Sbjct: 453 EKHTRYRPMIISQTTIFNMQAVV 475
>AK001492-1|BAA91721.1| 706|Homo sapiens protein ( Homo sapiens
cDNA FLJ10630 fis, clone NT2RP2005622. ).
Length = 706
Score = 75.8 bits (178), Expect = 2e-13
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Frame = -2
Query: 448 WRVTPXXVASRPSACLVNFXLNGRSVTLEVPRKGGGRSASHVLAAQGGELWIGXPGGSDH 269
+R++P V SRPS+CL NF LNGRSV LE PRK G + SH+L++ GGE+++ S
Sbjct: 335 YRISPVDVNSRPSSCLTNFLLNGRSVLLEQPRKSGSKVISHMLSSHGGEIFLHVLSSSRS 394
Query: 268 VRRSPRALR---GGRWTRHRLQNKRVWCTDAAK*AAPTPRGGVQRTREVSAAKAHDIL 104
+ P ++ GGR T +R+ + + + PR + + EV +A D L
Sbjct: 395 ILEDPPSISEGCGGRVTDYRITDFGEFMRENRLTPFLDPRYKIDGSLEVPLERAKDQL 452
Score = 73.7 bits (173), Expect = 8e-13
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Frame = -3
Query: 276 RTTYDDPPALSEGAGGRVTDYRIKEFGALMQQNKLHPLXXXXXXXXXXXR---------L 124
R+ +DPP++SEG GGRVTDYRI +FG M++N+L P L
Sbjct: 393 RSILEDPPSISEGCGGRVTDYRITDFGEFMRENRLTPFLDPRYKIDGSLEVPLERAKDQL 452
Query: 123 QRHTTYWPLTISSTLIFNLGSVM 55
+RHT YWP+ IS T IFN+ +V+
Sbjct: 453 ERHTPYWPMIISQTTIFNMQAVV 475
>AY211927-1|AAO65180.1| 151|Homo sapiens sarcoma antigen NY-SAR-95
protein.
Length = 151
Score = 74.1 bits (174), Expect = 6e-13
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = -2
Query: 448 WRVTPXXVASRPSACLVNFXLNGRSVTLEVPRKGGGRSASHVLAAQGGELWIGXPGGSDH 269
+R++P V SRPS+CL NF LNGRSV LE PRK G + SH+L++ GGE+++ S
Sbjct: 67 YRISPVDVNSRPSSCLTNFLLNGRSVLLEQPRKSGSKVISHMLSSHGGEIFLHVLSSSRS 126
Query: 268 VRRSPRALR---GGRWTRHRLQNKRVW 197
+ P ++ GGR T +R + R W
Sbjct: 127 ILEDPPSISEGCGGRVTDYR--DYRFW 151
>AK001222-1|BAA91565.1| 294|Homo sapiens protein ( Homo sapiens
cDNA FLJ10360 fis, clone NT2RM2001247. ).
Length = 294
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -3
Query: 276 RTTYDDPPALSEGAGGRVTDYRI 208
R+ +DPP++SEG GGRVTDYRI
Sbjct: 38 RSILEDPPSISEGCGGRVTDYRI 60
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = -2
Query: 346 GGRSASHVLAAQGGELWIGXPGGSDHVRRSPRALRGGRWTRHRLQN 209
GGR SH AQ G D +R P RGGR H+ Q+
Sbjct: 2112 GGRQGSHYDQAQDSSRHSASQEGQDTIRGHPGPSRGGRQGSHQEQS 2157
>AK128829-1|BAC87629.1| 385|Homo sapiens protein ( Homo sapiens
cDNA FLJ46309 fis, clone TESTI4039744. ).
Length = 385
Score = 31.1 bits (67), Expect = 5.5
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = -2
Query: 382 GRSVTLEVPRKGGGRSASHVLAAQGGELWIGXPGGSDHVRRSPRALRGGRWT--RHRLQN 209
GR+ L + GGR A +L +Q G+L G P D R+ RW + R +
Sbjct: 217 GRAEALLTSQTMGGR-AEALLTSQTGQLGRGAPHFPDGAAGQRRSSHPRRWAARQRRSSH 275
Query: 208 KRVWCTDAAK*AAPTPRGG 152
R W + ++P RGG
Sbjct: 276 PRRWAAGQRR-SSPPRRGG 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,086,118
Number of Sequences: 237096
Number of extensions: 2064709
Number of successful extensions: 5979
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5974
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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