Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_C12
         (946 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   4.0  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    23   4.0  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    23   4.0  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   5.3  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 20/92 (21%), Positives = 23/92 (25%), Gaps = 6/92 (6%)
 Frame = +2

Query: 614 PXXSPPXPLXXRALXPXSXXXH------AFPXNPXPSXLPXXHRXXXPXXXXXXXLPXXX 775
           P   PP P   R   P +   +        P  P P           P       +P   
Sbjct: 190 PQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 249

Query: 776 PXXPXLXXXXARXXXXXXXXPSXXPXPSPPXP 871
           P  P L              P   P P PP P
Sbjct: 250 PPHPRLRREAKPEAKPGNNRPVYIPQPRPPHP 281



 Score = 22.2 bits (45), Expect = 7.0
 Identities = 14/62 (22%), Positives = 15/62 (24%)
 Frame = +2

Query: 686 PXNPXPSXLPXXHRXXXPXXXXXXXLPXXXPXXPXLXXXXARXXXXXXXXPSXXPXPSPP 865
           P  P P           P       +P   P  P L              P   P P PP
Sbjct: 164 PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 223

Query: 866 XP 871
            P
Sbjct: 224 HP 225


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 20/92 (21%), Positives = 23/92 (25%), Gaps = 6/92 (6%)
 Frame = +2

Query: 614 PXXSPPXPLXXRALXPXSXXXH------AFPXNPXPSXLPXXHRXXXPXXXXXXXLPXXX 775
           P   PP P   R   P +   +        P  P P           P       +P   
Sbjct: 51  PQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 110

Query: 776 PXXPXLXXXXARXXXXXXXXPSXXPXPSPPXP 871
           P  P L              P   P P PP P
Sbjct: 111 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 142


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 20/92 (21%), Positives = 23/92 (25%), Gaps = 6/92 (6%)
 Frame = +2

Query: 614 PXXSPPXPLXXRALXPXSXXXH------AFPXNPXPSXLPXXHRXXXPXXXXXXXLPXXX 775
           P   PP P   R   P +   +        P  P P           P       +P   
Sbjct: 22  PQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 81

Query: 776 PXXPXLXXXXARXXXXXXXXPSXXPXPSPPXP 871
           P  P L              P   P P PP P
Sbjct: 82  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 113



 Score = 23.0 bits (47), Expect = 4.0
 Identities = 20/92 (21%), Positives = 23/92 (25%), Gaps = 6/92 (6%)
 Frame = +2

Query: 614 PXXSPPXPLXXRALXPXSXXXH------AFPXNPXPSXLPXXHRXXXPXXXXXXXLPXXX 775
           P   PP P   R   P +   +        P  P P           P       +P   
Sbjct: 50  PQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 109

Query: 776 PXXPXLXXXXARXXXXXXXXPSXXPXPSPPXP 871
           P  P L              P   P P PP P
Sbjct: 110 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 141



 Score = 23.0 bits (47), Expect = 4.0
 Identities = 20/92 (21%), Positives = 23/92 (25%), Gaps = 6/92 (6%)
 Frame = +2

Query: 614 PXXSPPXPLXXRALXPXSXXXH------AFPXNPXPSXLPXXHRXXXPXXXXXXXLPXXX 775
           P   PP P   R   P +   +        P  P P           P       +P   
Sbjct: 78  PQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 137

Query: 776 PXXPXLXXXXARXXXXXXXXPSXXPXPSPPXP 871
           P  P L              P   P P PP P
Sbjct: 138 PPHPRLRREAKPEAEPGNNRPVYIPQPRPPHP 169



 Score = 22.6 bits (46), Expect = 5.3
 Identities = 20/92 (21%), Positives = 23/92 (25%), Gaps = 6/92 (6%)
 Frame = +2

Query: 614 PXXSPPXPLXXRALXPXSXXXH------AFPXNPXPSXLPXXHRXXXPXXXXXXXLPXXX 775
           P   PP P   R   P +   +        P  P P           P       +P   
Sbjct: 106 PQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPGNNRPVYIPQPR 165

Query: 776 PXXPXLXXXXARXXXXXXXXPSXXPXPSPPXP 871
           P  P L              P   P P PP P
Sbjct: 166 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHP 197


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 14/62 (22%), Positives = 15/62 (24%)
 Frame = +2

Query: 686 PXNPXPSXLPXXHRXXXPXXXXXXXLPXXXPXXPXLXXXXARXXXXXXXXPSXXPXPSPP 865
           P  P P           P       +P   P  P L              P   P P PP
Sbjct: 53  PRPPHPRLRREAEPKAEPGNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPP 112

Query: 866 XP 871
            P
Sbjct: 113 HP 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,518
Number of Sequences: 438
Number of extensions: 1250
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30960384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)