Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_C08
         (806 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020264-1|AAH20264.1|  406|Homo sapiens HERPUD family member 2 ...    30   8.6  
BC005091-1|AAH05091.1|  406|Homo sapiens HERPUD2 protein protein.      30   8.6  

>BC020264-1|AAH20264.1|  406|Homo sapiens HERPUD family member 2
           protein.
          Length = 406

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +1

Query: 253 SHDHSGSGVRSQVLERLEMRLRSGGGGARRFTLFRLTXXDXXXHDXPHXVXGD 411
           S DHSGS   S   E L + + S   G R+ TL +        H  P+ + G+
Sbjct: 114 SSDHSGSTTPSSGQETLSLAVGSSSEGLRQRTLPQAQTDQAQSHQFPYVMQGN 166


>BC005091-1|AAH05091.1|  406|Homo sapiens HERPUD2 protein protein.
          Length = 406

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +1

Query: 253 SHDHSGSGVRSQVLERLEMRLRSGGGGARRFTLFRLTXXDXXXHDXPHXVXGD 411
           S DHSGS   S   E L + + S   G R+ TL +        H  P+ + G+
Sbjct: 114 SSDHSGSTTPSSGQETLSLAVGSSSEGLRQRTLPQAQTDQAQSHQFPYVMQGN 166


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,218,003
Number of Sequences: 237096
Number of extensions: 603811
Number of successful extensions: 1386
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)