Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_C06
(845 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 52 8e-07
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 48 9e-06
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 48 1e-05
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 48 1e-05
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 51.6 bits (118), Expect = 8e-07
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = -3
Query: 360 KAKNLRGDYDGRGVLGFSTLTLVPNQRECIDAEILIDFEISYVNAYHRRVLDTLSPILKE 181
K NL + G LGF LT VP Q + +D +L EI+++N YH V + +SP+L
Sbjct: 646 KEVNLPNSFGGVSYLGFEKLTFVPIQSKLVDLSLLSPSEINWINEYHDEVWEKVSPLLSG 705
Query: 180 RDLLKDLEWLEGQCIPI 130
L+WL P+
Sbjct: 706 H----SLDWLRKNTRPL 718
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 551 GHYLXXHEGPSRVXVASAPPTIPGLNLGQILSNEPGFYK 435
G L HEGP + + L G I+SNEPG+Y+
Sbjct: 595 GAALNVHEGPQSISYRYG--NLTALQKGMIVSNEPGYYE 631
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 48.0 bits (109), Expect = 9e-06
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = -3
Query: 351 NLRGDYDGRGVLGFSTLTLVPNQRECIDAEILIDFEISYVNAYHRRVLDTLSPILKERDL 172
N + ++ +G L F +T P Q + IDA +L EI +VN YH L P L E
Sbjct: 573 NTKFNFGDKGYLAFEHITWAPYQTKLIDATLLAPAEIEWVNTYHSDCRRILQPYLNE--- 629
Query: 171 LKDLEWLEGQCIPIT 127
++ EWL PIT
Sbjct: 630 -QEKEWLRKATEPIT 643
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 551 GHYLXXHEGPSRVXVASAPPTIPGLNLGQILSNEPGFYK 435
G YL HEGP ++ + +P L +++EPG+Y+
Sbjct: 518 GSYLTVHEGPHQISFRPSARNVP-LQASMTVTDEPGYYQ 555
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/77 (35%), Positives = 37/77 (48%)
Frame = -3
Query: 360 KAKNLRGDYDGRGVLGFSTLTLVPNQRECIDAEILIDFEISYVNAYHRRVLDTLSPILKE 181
K N + ++ +G L F +T P Q + ID +L EI +VNAYH L P L E
Sbjct: 622 KEANTKYNFGDKGYLAFEHITWAPYQTKLIDTTLLTPAEIEWVNAYHADCRKILQPYLNE 681
Query: 180 RDLLKDLEWLEGQCIPI 130
++ EWL PI
Sbjct: 682 ----QEKEWLRKATEPI 694
Score = 31.5 bits (68), Expect = 0.87
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 551 GHYLXXHEGPSRVXVASAPPTIPGLNLGQILSNEPGFYK 435
G YL HEGP + + IP L +++EPG+Y+
Sbjct: 570 GSYLNVHEGPHLISFRPSARNIP-LQASMTVTDEPGYYE 607
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/77 (35%), Positives = 37/77 (48%)
Frame = -3
Query: 360 KAKNLRGDYDGRGVLGFSTLTLVPNQRECIDAEILIDFEISYVNAYHRRVLDTLSPILKE 181
K N + ++ +G L F +T P Q + ID +L EI +VNAYH L P L E
Sbjct: 544 KEANTKFNFGDKGYLAFEHITWTPYQTKLIDTTLLTPAEIEWVNAYHSDCRKILQPYLNE 603
Query: 180 RDLLKDLEWLEGQCIPI 130
++ EWL PI
Sbjct: 604 ----QEKEWLRKATEPI 616
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 551 GHYLXXHEGPSRVXVASAPPTIPGLNLGQILSNEPGFYK 435
G YL HEGP + + +P L +++EPG+Y+
Sbjct: 492 GSYLNVHEGPHLISFRPSARNVP-LQASMTVTDEPGYYE 529
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,210,664
Number of Sequences: 37544
Number of extensions: 330058
Number of successful extensions: 640
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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