Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_C03
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 37 0.020
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 36 0.047
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.25
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.77
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 1.8
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 1.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 1.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 25 3.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 7.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 23 7.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 23 7.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 23 7.6
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 9.4
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 9.4
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 9.4
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 28 9.4
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 9.4
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 9.4
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 9.4
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 28 9.4
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 36.7 bits (81), Expect = 0.020
Identities = 39/157 (24%), Positives = 39/157 (24%), Gaps = 3/157 (1%)
Frame = -3
Query: 827 GGGEGXGGXXXRXXXXXXXXXRXXXXXXXXXXGXGGXGXXXXAXGGGXXXGRGGKXXLXX 648
GGG G GG G GG G GGG G GG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGG------ 96
Query: 647 XXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXXR 468
G GG G G GG GG G
Sbjct: 97 ----GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGG 152
Query: 467 XGXXXXGXXXXPAGGXGXXGXGG---GXXXGXXCXGG 366
G G GG G G GG G G C GG
Sbjct: 153 GGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGG 189
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = -3
Query: 587 GXXXXXGGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXG 408
G G G G GG P G G G GG G G
Sbjct: 35 GCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGG 94
Query: 407 XGGGXXXGXXCXGG 366
GGG G C GG
Sbjct: 95 GGGGCGGGGGCGGG 108
Score = 31.5 bits (68), Expect = 0.77
Identities = 23/75 (30%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = -3
Query: 587 GXXXXXGGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXG 408
G GG G G GG GG G G G GG G G
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGG--GCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCG 80
Query: 407 XGGG-XXXGXXCXGG 366
GGG G C GG
Sbjct: 81 GGGGCGGGGGGCGGG 95
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 35.5 bits (78), Expect = 0.047
Identities = 32/122 (26%), Positives = 32/122 (26%)
Frame = -3
Query: 731 GXGGXGXXXXAXGGGXXXGRGGKXXLXXXXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQ 552
G GG G GGG G GG G G G G
Sbjct: 98 GYGGGGDFGGGMGGGGYGG-GGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGG 156
Query: 551 GXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXGXGGGXXXGXXCX 372
G GG GG G G G GG G G GGG G
Sbjct: 157 GGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYG 216
Query: 371 GG 366
GG
Sbjct: 217 GG 218
Score = 32.7 bits (71), Expect = 0.33
Identities = 36/145 (24%), Positives = 36/145 (24%)
Frame = -3
Query: 830 GGGGEGXGGXXXRXXXXXXXXXRXXXXXXXXXXGXGGXGXXXXAXGGGXXXGRGGKXXLX 651
GGGG G GG G GG G GGG GG
Sbjct: 110 GGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGG 169
Query: 650 XXXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXX 471
G G GG G G GG GG G
Sbjct: 170 MGGGGYGGGGDGGYGGGGFGGGGMGGYGG--GMGGGGYGGGGMGGGGYGGGGDGGYGPSG 227
Query: 470 RXGXXXXGXXXXPAGGXGXXGXGGG 396
G P GG G G GGG
Sbjct: 228 -----GYGGGYGPGGGYGMGGGGGG 247
Score = 32.7 bits (71), Expect = 0.33
Identities = 31/122 (25%), Positives = 32/122 (26%)
Frame = -3
Query: 731 GXGGXGXXXXAXGGGXXXGRGGKXXLXXXXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQ 552
G G G GGG G GG + G G GG G
Sbjct: 121 GGGDGGGGYGGYGGGGYGGMGGGPG--GYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGG 178
Query: 551 GXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXGXGGGXXXGXXCX 372
G GG GG G G G GG G G GG G
Sbjct: 179 GDGGYGGGGFGG--GGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPG 236
Query: 371 GG 366
GG
Sbjct: 237 GG 238
Score = 30.7 bits (66), Expect = 1.3
Identities = 32/122 (26%), Positives = 32/122 (26%)
Frame = -3
Query: 731 GXGGXGXXXXAXGGGXXXGRGGKXXLXXXXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQ 552
G GG G GGG G GG G G GG G
Sbjct: 113 GYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGG----GGGGDFGGYGGG 168
Query: 551 GXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXGXGGGXXXGXXCX 372
G GG G G G G GG G G GGG G
Sbjct: 169 GMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYG--GGGMGGGGYGGGGDGGYGPS 226
Query: 371 GG 366
GG
Sbjct: 227 GG 228
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/120 (23%), Positives = 28/120 (23%)
Frame = -3
Query: 725 GGXGXXXXAXGGGXXXGRGGKXXLXXXXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQGX 546
GG G GGG GRGG G G GG G
Sbjct: 58 GGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGGSQGGSS 117
Query: 545 GGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXGXGGGXXXGXXCXGG 366
GG G G GG G G GG G GG
Sbjct: 118 GGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGG 177
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -3
Query: 569 GGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXGXGGGXX 390
GG G G GG GG G G G GG G G GGG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 389 XGXXCXGG 366
G C GG
Sbjct: 145 GG--CGGG 150
Score = 30.7 bits (66), Expect = 1.3
Identities = 35/154 (22%), Positives = 36/154 (23%)
Frame = -3
Query: 830 GGGGEGXGGXXXRXXXXXXXXXRXXXXXXXXXXGXGGXGXXXXAXGGGXXXGRGGKXXLX 651
GGGG G GG G GG G GG G G
Sbjct: 99 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158
Query: 650 XXXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXX 471
G G G G G GG GG A
Sbjct: 159 GGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSS----GGGGYAVAPSGGGGCGG 214
Query: 470 RXGXXXXGXXXXPAGGXGXXGXGGGXXXGXXCXG 369
G P+GG G GGG G G
Sbjct: 215 GGSSGGGGYASAPSGGGGYATSGGGGSGGYATGG 248
Score = 28.7 bits (61), Expect = 5.4
Identities = 31/122 (25%), Positives = 31/122 (25%)
Frame = -3
Query: 731 GXGGXGXXXXAXGGGXXXGRGGKXXLXXXXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQ 552
G GG GGG G GG G G GG G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGG--------CGGGGGGCGGGGGCGGGGGGCGGGGGGCG- 118
Query: 551 GXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXGXGGGXXXGXXCX 372
G GG GG G G G GG G GGG G
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG 178
Query: 371 GG 366
GG
Sbjct: 179 GG 180
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -3
Query: 569 GGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXGXGGGXX 390
GG G G GG GG G G G GG G G GGG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 389 XGXXCXGG 366
G C GG
Sbjct: 145 GG--CGGG 150
Score = 30.7 bits (66), Expect = 1.3
Identities = 35/154 (22%), Positives = 36/154 (23%)
Frame = -3
Query: 830 GGGGEGXGGXXXRXXXXXXXXXRXXXXXXXXXXGXGGXGXXXXAXGGGXXXGRGGKXXLX 651
GGGG G GG G GG G GG G G
Sbjct: 99 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158
Query: 650 XXXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXX 471
G G G G G GG GG A
Sbjct: 159 GGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSS----GGGGYAVAPSGGGGCGG 214
Query: 470 RXGXXXXGXXXXPAGGXGXXGXGGGXXXGXXCXG 369
G P+GG G GGG G G
Sbjct: 215 GGSSGGGGYASAPSGGGGYATSGGGGSGGYATGG 248
Score = 28.7 bits (61), Expect = 5.4
Identities = 31/122 (25%), Positives = 31/122 (25%)
Frame = -3
Query: 731 GXGGXGXXXXAXGGGXXXGRGGKXXLXXXXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQ 552
G GG GGG G GG G G GG G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGG--------CGGGGGGCGGGGGCGGGGGGCGGGGGGCG- 118
Query: 551 GXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXGXGGGXXXGXXCX 372
G GG GG G G G GG G GGG G
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG 178
Query: 371 GG 366
GG
Sbjct: 179 GG 180
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.77
Identities = 23/75 (30%), Positives = 24/75 (32%)
Frame = +1
Query: 397 PPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPPIP*PXXPPXX 576
PPP P P PP P P L P PP PP P P PP
Sbjct: 27 PPPCP--PPPP------PMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
Query: 577 XXXPXCSXXXXXAPS 621
P S AP+
Sbjct: 79 PPMPSYSPCQSYAPA 93
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/56 (26%), Positives = 16/56 (28%)
Frame = +1
Query: 385 PXXXPPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPPIP 552
P PPP P PP P P P PP PP+P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = -3
Query: 587 GXXXXXGGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXG 408
G GG G G GG GG G G G GG G G
Sbjct: 44 GRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGG 103
Query: 407 XGGGXXXGXXCXGG 366
GGG GG
Sbjct: 104 RGGGGGGRGGGGGG 117
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = -3
Query: 569 GGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXGXGGGXX 390
GG G GG GG G G G GG G G GGG
Sbjct: 70 GGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRG 129
Query: 389 XG 384
G
Sbjct: 130 GG 131
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = +1
Query: 367 PPXHXXPXXXPPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPP 546
PP P PPP P P PP P P PP PP
Sbjct: 92 PPPPPKPTIRPPPIPASP-PPRPPASEPVGIPLYSEKQHQQQLRPTTAVSPPKPPSFAPP 150
Query: 547 IP 552
+P
Sbjct: 151 VP 152
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = +1
Query: 367 PPXHXXPXXXPPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPP 546
PP P PPP P P PP P P PP PP
Sbjct: 314 PPPPPKPTIRPPPIPASP-PPRPPASEPVGIPLYSEKQHQQQLRPTTAVSPPKPPSFAPP 372
Query: 547 IP 552
+P
Sbjct: 373 VP 374
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 655 SXXXPPRPXXXPPPXAXXLXPXPPXP 732
S PP P PPP + L P PP P
Sbjct: 1334 SSPSPPPPPPPPPPPSDDLTPVPPPP 1359
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/110 (22%), Positives = 27/110 (24%)
Frame = +1
Query: 397 PPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPPIP*PXXPPXX 576
P P P PP G P P A PP PP P PP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSP---------PPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Query: 577 XXXPXCSXXXXXAPSXXXXXXTXXXXSXXXPPRPXXXPPPXAXXLXPXPP 726
+P PP+ PPP P PP
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +1
Query: 367 PPXHXXPXXXPPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPP 546
PP PPP P PPAG P P PP PP
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Query: 547 IP*PXXPP 570
PP
Sbjct: 324 AGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/110 (22%), Positives = 27/110 (24%)
Frame = +1
Query: 397 PPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPPIP*PXXPPXX 576
P P P PP G P P A PP PP P PP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSP---------PPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Query: 577 XXXPXCSXXXXXAPSXXXXXXTXXXXSXXXPPRPXXXPPPXAXXLXPXPP 726
+P PP+ PPP P PP
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +1
Query: 367 PPXHXXPXXXPPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPP 546
PP PPP P PPAG P P PP PP
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Query: 547 IP*PXXPP 570
PP
Sbjct: 345 AGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/110 (22%), Positives = 27/110 (24%)
Frame = +1
Query: 397 PPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPPIP*PXXPPXX 576
P P P PP G P P A PP PP P PP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSP---------PPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Query: 577 XXXPXCSXXXXXAPSXXXXXXTXXXXSXXXPPRPXXXPPPXAXXLXPXPP 726
+P PP+ PPP P PP
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +1
Query: 367 PPXHXXPXXXPPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPP 546
PP PPP P PPAG P P PP PP
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Query: 547 IP*PXXPP 570
PP
Sbjct: 330 AGTGSPPP 337
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.1
Identities = 30/127 (23%), Positives = 32/127 (25%), Gaps = 5/127 (3%)
Frame = +1
Query: 367 PPXHXXPXXXP-PPXPXX---PXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXX 534
PP P P PP P P PP P P P PP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 325
Query: 535 XXPPIP*PXXPPXXXXXPXCSXXXXXAPSXXXXXXTXXXXSXXXPPRPXXXP-PPXAXXL 711
P + PP P P PP P P PP +
Sbjct: 326 GPPGMGGMPPPP-----PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGM 380
Query: 712 XPXPPXP 732
P PP P
Sbjct: 381 IPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.1
Identities = 30/127 (23%), Positives = 32/127 (25%), Gaps = 5/127 (3%)
Frame = +1
Query: 367 PPXHXXPXXXP-PPXPXX---PXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXX 534
PP P P PP P P PP P P P PP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 335
Query: 535 XXPPIP*PXXPPXXXXXPXCSXXXXXAPSXXXXXXTXXXXSXXXPPRPXXXP-PPXAXXL 711
P + PP P P PP P P PP +
Sbjct: 336 GPPGMGGMPPPP-----PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGM 390
Query: 712 XPXPPXP 732
P PP P
Sbjct: 391 IPPPPPP 397
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 24.6 bits (51), Expect(2) = 3.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 667 PPRPXXXPPPXAXXLXPXPPXP 732
PPR PP A P PP P
Sbjct: 128 PPRTCCPPPTPAAPPPPPPPPP 149
Score = 23.0 bits (47), Expect(2) = 3.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 805 PPXPSPPPP 831
PP P PPPP
Sbjct: 142 PPPPPPPPP 150
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/74 (29%), Positives = 22/74 (29%)
Frame = -3
Query: 587 GXXXXXGGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXG 408
G GG G G GG GG A G PAGG G
Sbjct: 352 GGAGGAGGYSGGGGGGGGGAAAGGGYNAGGGG-GGAPQAAPAPQAAPAPAAPAGGGYNAG 410
Query: 407 XGGGXXXGXXCXGG 366
GGG G GG
Sbjct: 411 GGGGAGGGGGYAGG 424
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = +1
Query: 490 TXXPXAXXGPPXXXXXXPPIP*PXXPPXXXXXPXCSXXXXXAPSXXXXXXTXXXXSXXXP 669
T P G P PP P P P P P P
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 670 PRPXXXPPPXAXXLXPXPPXP 732
P P PPP P PP P
Sbjct: 770 P-PPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = +1
Query: 490 TXXPXAXXGPPXXXXXXPPIP*PXXPPXXXXXPXCSXXXXXAPSXXXXXXTXXXXSXXXP 669
T P G P PP P P P P P P
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 670 PRPXXXPPPXAXXLXPXPPXP 732
P P PPP P PP P
Sbjct: 770 P-PPPPPPPGGFKGGPPPPPP 789
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/60 (28%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +1
Query: 655 SXXXPPRPXXXPPPXAXXLXPXP-PXPXXXXXXXXXXRXXXXXXXXXLXXXPPXPSPPPP 831
S P P PPP + P P P P PP P PPPP
Sbjct: 463 STTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = +1
Query: 490 TXXPXAXXGPPXXXXXXPPIP*PXXPPXXXXXPXCSXXXXXAPSXXXXXXTXXXXSXXXP 669
T P G P PP P P P P P P
Sbjct: 293 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Query: 670 PRPXXXPPPXAXXLXPXPPXP 732
P P PPP P PP P
Sbjct: 353 P-PPPPPPPGGFKGGPPPPPP 372
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 7.1
Identities = 30/120 (25%), Positives = 30/120 (25%)
Frame = -3
Query: 725 GGXGXXXXAXGGGXXXGRGGKXXLXXXXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQGX 546
GG G GG GRGG G G GG G G
Sbjct: 42 GGGGPGGWGNNGGGGWGRGG-----GRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGR 96
Query: 545 GGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXGXGGGXXXGXXCXGG 366
GG GG G G G GG G G GG GG
Sbjct: 97 GGGGRGDWGGNNNGGGGNWGGGGNNDGG--WGGNNGGGGGGRGGGGRGGDGRGPPGSNGG 154
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 23.4 bits (48), Expect(2) = 7.5
Identities = 21/78 (26%), Positives = 24/78 (30%)
Frame = +1
Query: 499 PXAXXGPPXXXXXXPPIP*PXXPPXXXXXPXCSXXXXXAPSXXXXXXTXXXXSXXXPPRP 678
P + P IP P PP P C P+ T S PP P
Sbjct: 748 PRSASTPQPIQQQQSSIPPPPPPPPP---PHCE------PTMVHVEFTPPSTSSVPPPPP 798
Query: 679 XXXPPPXAXXLXPXPPXP 732
PP + P PP P
Sbjct: 799 PL--PPISSGAPPPPPPP 814
Score = 23.0 bits (47), Expect(2) = 7.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 805 PPXPSPPPP 831
PP P PPPP
Sbjct: 808 PPPPPPPPP 816
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 23.4 bits (48), Expect(2) = 7.5
Identities = 21/78 (26%), Positives = 24/78 (30%)
Frame = +1
Query: 499 PXAXXGPPXXXXXXPPIP*PXXPPXXXXXPXCSXXXXXAPSXXXXXXTXXXXSXXXPPRP 678
P + P IP P PP P C P+ T S PP P
Sbjct: 748 PRSASTPQPIQQQQSSIPPPPPPPPP---PHCE------PTMVHVEFTPPSTSSVPPPPP 798
Query: 679 XXXPPPXAXXLXPXPPXP 732
PP + P PP P
Sbjct: 799 PL--PPISSGAPPPPPPP 814
Score = 23.0 bits (47), Expect(2) = 7.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 805 PPXPSPPPP 831
PP P PPPP
Sbjct: 808 PPPPPPPPP 816
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 23.4 bits (48), Expect(2) = 7.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 793 LXXXPPXPSPPPP 831
L PP P PPPP
Sbjct: 80 LQQAPPPPPPPPP 92
Score = 23.0 bits (47), Expect(2) = 7.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 670 PRPXXXPPPXAXXLXPXPPXP 732
P P PPP L PP P
Sbjct: 67 PPPPPPPPPLISILQQAPPPP 87
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 367 PPXHXXPXXXPPPXPXXPXPP 429
PP P PPP P P PP
Sbjct: 778 PPFFALPVPPPPPVPPPPPPP 798
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 428 GGXGXXGXGGGXXXGXXCXGG 366
GG G G GGG G C GG
Sbjct: 91 GGGGCGGGGGGCGGGGGCGGG 111
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = -3
Query: 569 GGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXGXGGGXX 390
GG G GG GG G G G GG G G GGG
Sbjct: 36 GGAGGDILGGLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGG 95
Query: 389 XGXXCXGGXXXS 354
GG S
Sbjct: 96 FNFNDIGGLINS 107
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/78 (26%), Positives = 22/78 (28%)
Frame = -3
Query: 587 GXXXXXGGXXGQGXGGXXXXXXGGPXXAXGXXVXXXXXXRXGXXXXGXXXXPAGGXGXXG 408
G GG G G GG G G + G G GG G G
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNY--GGGGGNQG 114
Query: 407 XGGGXXXGXXCXGGXXXS 354
GGG GG S
Sbjct: 115 GGGGGGFNFNDIGGLINS 132
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/78 (25%), Positives = 20/78 (25%)
Frame = -3
Query: 731 GXGGXGXXXXAXGGGXXXGRGGKXXLXXXXVXXXXXXXGAXXXXXEQXGXXXXXGGXXGQ 552
G G G GG G GG G GG GQ
Sbjct: 225 GSGPSGSANSGPSGGGGGGGGGGQSNNNSSFSSVPAFNGGGGGGGGMNVGAAGFGGGGGQ 284
Query: 551 GXGGXXXXXXGGPXXAXG 498
G GG GGP G
Sbjct: 285 GYGGPQFGGQGGPQFGNG 302
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/64 (25%), Positives = 18/64 (28%)
Frame = +1
Query: 367 PPXHXXPXXXPPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPP 546
PP P PPP P P G P P + PP P
Sbjct: 90 PPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPI 149
Query: 547 IP*P 558
+P P
Sbjct: 150 VPPP 153
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/64 (25%), Positives = 18/64 (28%)
Frame = +1
Query: 367 PPXHXXPXXXPPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPP 546
PP P PPP P P G P P + PP P
Sbjct: 113 PPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPI 172
Query: 547 IP*P 558
+P P
Sbjct: 173 VPPP 176
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/64 (25%), Positives = 18/64 (28%)
Frame = +1
Query: 367 PPXHXXPXXXPPPXPXXPXPPAGXXXXPXXXXPXLXXXXXXTXXPXAXXGPPXXXXXXPP 546
PP P PPP P P G P P + PP P
Sbjct: 363 PPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPI 422
Query: 547 IP*P 558
+P P
Sbjct: 423 VPPP 426
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 428 GGXGXXGXGGGXXXGXXCXGG 366
GG G G GGG G C GG
Sbjct: 26 GGAGGCGGGGGCGGGGGCGGG 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,365,268
Number of Sequences: 27780
Number of extensions: 162630
Number of successful extensions: 1498
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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