BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_B23
(871 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122088-1|AAM52600.1| 540|Drosophila melanogaster GH03014p pro... 134 1e-31
AE013599-491|AAG22307.1| 217|Drosophila melanogaster CG18812-PA... 134 1e-31
AE013599-490|AAG22306.1| 244|Drosophila melanogaster CG18812-PB... 134 1e-31
AE013599-489|AAG22308.2| 540|Drosophila melanogaster CG18812-PC... 134 1e-31
AY069311-1|AAL39456.1| 476|Drosophila melanogaster LD02491p pro... 32 0.89
AE014296-2101|AAF49953.1| 476|Drosophila melanogaster CG6811-PA... 32 0.89
AE013599-3171|AAF46706.1| 1283|Drosophila melanogaster CG10505-P... 31 2.7
AY051860-1|AAK93284.1| 594|Drosophila melanogaster LD35730p pro... 29 8.3
AE014134-1223|AAN10614.1| 594|Drosophila melanogaster CG11266-P... 29 8.3
AE014134-1222|AAF52478.1| 594|Drosophila melanogaster CG11266-P... 29 8.3
>AY122088-1|AAM52600.1| 540|Drosophila melanogaster GH03014p
protein.
Length = 540
Score = 134 bits (325), Expect = 1e-31
Identities = 75/155 (48%), Positives = 89/155 (57%)
Frame = -2
Query: 588 GVIEMGRPVVVXIGEWFPXGEHRLGKGTPCNLIQXPGSDRARRLX*SXXXXXXXXXXXXX 409
GV +GRPV+V G+WFP L K LI+ S
Sbjct: 388 GVDRLGRPVIVFCGKWFPAQNIDLEKAL-LYLIKLLDPIVKGDYVISYFHTLTSTNNYPS 446
Query: 408 XXRGFKEVYTVLPYKYKKNLKAFYIVHPXXXXXXXXXXXXXXMAPAIKAKVHSLPGVEYL 229
+EVY+VLPYKYKKNLKAFYIVHP MAPAIKAKVHSLPGVE+L
Sbjct: 447 LHW-LREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPAIKAKVHSLPGVEHL 505
Query: 228 YSVMPRDQLEVPAFVTEYDMTINGLHYFQPDTTST 124
YS + +DQLE+PA++TEYDM NGLHYF P T++
Sbjct: 506 YSAITKDQLEIPAYITEYDMATNGLHYFNPVPTAS 540
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3
Query: 548 GNGSPXGNIDLEKALPVT*SKXLDPIVRGD 459
G P NIDLEKAL + K LDPIV+GD
Sbjct: 401 GKWFPAQNIDLEKAL-LYLIKLLDPIVKGD 429
>AE013599-491|AAG22307.1| 217|Drosophila melanogaster CG18812-PA,
isoform A protein.
Length = 217
Score = 134 bits (325), Expect = 1e-31
Identities = 75/155 (48%), Positives = 89/155 (57%)
Frame = -2
Query: 588 GVIEMGRPVVVXIGEWFPXGEHRLGKGTPCNLIQXPGSDRARRLX*SXXXXXXXXXXXXX 409
GV +GRPV+V G+WFP L K LI+ S
Sbjct: 65 GVDRLGRPVIVFCGKWFPAQNIDLEKAL-LYLIKLLDPIVKGDYVISYFHTLTSTNNYPS 123
Query: 408 XXRGFKEVYTVLPYKYKKNLKAFYIVHPXXXXXXXXXXXXXXMAPAIKAKVHSLPGVEYL 229
+EVY+VLPYKYKKNLKAFYIVHP MAPAIKAKVHSLPGVE+L
Sbjct: 124 LHW-LREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPAIKAKVHSLPGVEHL 182
Query: 228 YSVMPRDQLEVPAFVTEYDMTINGLHYFQPDTTST 124
YS + +DQLE+PA++TEYDM NGLHYF P T++
Sbjct: 183 YSAITKDQLEIPAYITEYDMATNGLHYFNPVPTAS 217
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3
Query: 548 GNGSPXGNIDLEKALPVT*SKXLDPIVRGD 459
G P NIDLEKAL + K LDPIV+GD
Sbjct: 78 GKWFPAQNIDLEKAL-LYLIKLLDPIVKGD 106
>AE013599-490|AAG22306.1| 244|Drosophila melanogaster CG18812-PB,
isoform B protein.
Length = 244
Score = 134 bits (325), Expect = 1e-31
Identities = 75/155 (48%), Positives = 89/155 (57%)
Frame = -2
Query: 588 GVIEMGRPVVVXIGEWFPXGEHRLGKGTPCNLIQXPGSDRARRLX*SXXXXXXXXXXXXX 409
GV +GRPV+V G+WFP L K LI+ S
Sbjct: 92 GVDRLGRPVIVFCGKWFPAQNIDLEKAL-LYLIKLLDPIVKGDYVISYFHTLTSTNNYPS 150
Query: 408 XXRGFKEVYTVLPYKYKKNLKAFYIVHPXXXXXXXXXXXXXXMAPAIKAKVHSLPGVEYL 229
+EVY+VLPYKYKKNLKAFYIVHP MAPAIKAKVHSLPGVE+L
Sbjct: 151 LHW-LREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPAIKAKVHSLPGVEHL 209
Query: 228 YSVMPRDQLEVPAFVTEYDMTINGLHYFQPDTTST 124
YS + +DQLE+PA++TEYDM NGLHYF P T++
Sbjct: 210 YSAITKDQLEIPAYITEYDMATNGLHYFNPVPTAS 244
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3
Query: 548 GNGSPXGNIDLEKALPVT*SKXLDPIVRGD 459
G P NIDLEKAL + K LDPIV+GD
Sbjct: 105 GKWFPAQNIDLEKAL-LYLIKLLDPIVKGD 133
>AE013599-489|AAG22308.2| 540|Drosophila melanogaster CG18812-PC,
isoform C protein.
Length = 540
Score = 134 bits (325), Expect = 1e-31
Identities = 75/155 (48%), Positives = 89/155 (57%)
Frame = -2
Query: 588 GVIEMGRPVVVXIGEWFPXGEHRLGKGTPCNLIQXPGSDRARRLX*SXXXXXXXXXXXXX 409
GV +GRPV+V G+WFP L K LI+ S
Sbjct: 388 GVDRLGRPVIVFCGKWFPAQNIDLEKAL-LYLIKLLDPIVKGDYVISYFHTLTSTNNYPS 446
Query: 408 XXRGFKEVYTVLPYKYKKNLKAFYIVHPXXXXXXXXXXXXXXMAPAIKAKVHSLPGVEYL 229
+EVY+VLPYKYKKNLKAFYIVHP MAPAIKAKVHSLPGVE+L
Sbjct: 447 LHW-LREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPAIKAKVHSLPGVEHL 505
Query: 228 YSVMPRDQLEVPAFVTEYDMTINGLHYFQPDTTST 124
YS + +DQLE+PA++TEYDM NGLHYF P T++
Sbjct: 506 YSAITKDQLEIPAYITEYDMATNGLHYFNPVPTAS 540
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3
Query: 548 GNGSPXGNIDLEKALPVT*SKXLDPIVRGD 459
G P NIDLEKAL + K LDPIV+GD
Sbjct: 401 GKWFPAQNIDLEKAL-LYLIKLLDPIVKGD 429
>AY069311-1|AAL39456.1| 476|Drosophila melanogaster LD02491p
protein.
Length = 476
Score = 32.3 bits (70), Expect = 0.89
Identities = 16/75 (21%), Positives = 34/75 (45%)
Frame = -2
Query: 384 YTVLPYKYKKNLKAFYIVHPXXXXXXXXXXXXXXMAPAIKAKVHSLPGVEYLYSVMPRDQ 205
Y L ++KNLK Y+VHP ++ + K+ + ++ L + ++
Sbjct: 170 YKELDRNFRKNLKTLYVVHPTWFIRVIWNFFSPFISDKFRKKLVYISSLDELRQALGLNK 229
Query: 204 LEVPAFVTEYDMTIN 160
L++P + + D +N
Sbjct: 230 LKLPDNICDLDDKLN 244
>AE014296-2101|AAF49953.1| 476|Drosophila melanogaster CG6811-PA
protein.
Length = 476
Score = 32.3 bits (70), Expect = 0.89
Identities = 16/75 (21%), Positives = 34/75 (45%)
Frame = -2
Query: 384 YTVLPYKYKKNLKAFYIVHPXXXXXXXXXXXXXXMAPAIKAKVHSLPGVEYLYSVMPRDQ 205
Y L ++KNLK Y+VHP ++ + K+ + ++ L + ++
Sbjct: 170 YKELDRNFRKNLKTLYVVHPTWFIRVIWNFFSPFISDKFRKKLVYISSLDELRQALGLNK 229
Query: 204 LEVPAFVTEYDMTIN 160
L++P + + D +N
Sbjct: 230 LKLPDNICDLDDKLN 244
>AE013599-3171|AAF46706.1| 1283|Drosophila melanogaster CG10505-PA
protein.
Length = 1283
Score = 30.7 bits (66), Expect = 2.7
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 94 DEGGTRADTLRTSRVRLEIVETVYRHVVLRDEGRHLELVARHDGVQVLDAGQTVDLG 264
DE DT T + E ++T + + L V +D V V+DAGQ V+ G
Sbjct: 1178 DEATANVDT-ETDILIQETIQTKFAECTVLTIAHRLHTVMDNDSVLVMDAGQIVEFG 1233
>AY051860-1|AAK93284.1| 594|Drosophila melanogaster LD35730p
protein.
Length = 594
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 274 GDKSQGPQSARRRVPVLRHAARPARGAGLRHGVRHDDKRS 155
GD+ + + R R R +R RG G R+G R D+RS
Sbjct: 115 GDRDRERERERERDRSRRSRSRDERGGGGRYGDRDKDRRS 154
>AE014134-1223|AAN10614.1| 594|Drosophila melanogaster CG11266-PB,
isoform B protein.
Length = 594
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 274 GDKSQGPQSARRRVPVLRHAARPARGAGLRHGVRHDDKRS 155
GD+ + + R R R +R RG G R+G R D+RS
Sbjct: 115 GDRDRERERERERDRSRRSRSRDERGGGGRYGDRDKDRRS 154
>AE014134-1222|AAF52478.1| 594|Drosophila melanogaster CG11266-PA,
isoform A protein.
Length = 594
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 274 GDKSQGPQSARRRVPVLRHAARPARGAGLRHGVRHDDKRS 155
GD+ + + R R R +R RG G R+G R D+RS
Sbjct: 115 GDRDRERERERERDRSRRSRSRDERGGGGRYGDRDKDRRS 154
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,553,456
Number of Sequences: 53049
Number of extensions: 525649
Number of successful extensions: 1287
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -