Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_B23
         (871 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   4.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   8.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 106 TRADTLRTSRVRLEIVETVYRHVVLRDEGRHLELVARHD 222
           T A T  T+   L   ET+ RH  L++   HL+  A  D
Sbjct: 120 TAAATATTTATGLIKQETLQRHHHLQNHHHHLQSTAVQD 158


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 352 ILLVFVRQHRVHLLEXTRRADGSPTRP 432
           +  ++ R  R HLLE   +  G P  P
Sbjct: 25  LYFIYFRISRRHLLELAEKIPGPPALP 51


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +2

Query: 536 GNHSPXXTTTGRPISXTPLXXKTSNP 613
           G H P     GRP   T     TS P
Sbjct: 211 GRHLPGHAQMGRPSYTTATMATTSTP 236


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,554
Number of Sequences: 438
Number of extensions: 3227
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)