Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_B17
(830 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 66 8e-12
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 51 2e-07
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 51 2e-07
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 49 7e-07
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 48 1e-06
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 48 2e-06
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 45 2e-05
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 41 2e-04
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 40 6e-04
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 38 0.002
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 35 0.016
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 35 0.016
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 33 0.050
SPAC16E8.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.4
SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr 1|||... 28 1.4
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.5
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 27 3.3
SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70 |Schi... 27 4.3
SPAC5H10.06c |adh4||alcohol dehydrogenase Adh4|Schizosaccharomyc... 26 7.5
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 25 10.0
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 25 10.0
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 65.7 bits (153), Expect = 8e-12
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Frame = -3
Query: 648 DELNXASATCFEVLGEVEEGWWQGRR-QXRVGVFPSNFVVMLDXXXXXXXXXXXXXXXXP 472
+E+ ++L V++GWW G + + G+FPSN+V + P
Sbjct: 742 NEIELVENEQIQILEFVDDGWWLGENSKGQQGLFPSNYVEITGPNETANNPPAEPQAGGP 801
Query: 471 VKEQCRVLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDNFVQ 301
K + ++ Y A D+EL+ E +I+ + + D WW GE HG GLFP N+V+
Sbjct: 802 GKS-VKAIYDYQAQEDNELSFFEDEIIANV--DCVDPNWWEGECHGHRGLFPSNYVE 855
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = -3
Query: 453 VLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGE-LHGRVGLFPDNFVQLL-PAATA 280
V++ Y+ ++E+ L E + + ++ E D GWW GE G+ GLFP N+V++ P TA
Sbjct: 732 VIYDYSPEEENEIELVENEQIQIL--EFVDDGWWLGENSKGQQGLFPSNYVEITGPNETA 789
Query: 279 EVEEKKPE 256
+P+
Sbjct: 790 NNPPAEPQ 797
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = -3
Query: 456 RVLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDNFVQLLPAATAE 277
R L+ +AA EL+ +GDI+ V+ E+ + WW+G VG+FP N+VQ + T E
Sbjct: 221 RALYDFAATEQGELSFKKGDIILVL--ESVYKDWWKGSCKNAVGIFPVNYVQRVVEPTIE 278
Query: 276 VEEK 265
+ +
Sbjct: 279 QQRQ 282
Score = 33.1 bits (72), Expect = 0.050
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 645 ELNXASATCFEVLGEVEEGWWQGRRQXRVGVFPSNFV 535
EL+ VL V + WW+G + VG+FP N+V
Sbjct: 233 ELSFKKGDIILVLESVYKDWWKGSCKNAVGIFPVNYV 269
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 50.8 bits (116), Expect = 2e-07
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = -3
Query: 465 EQCRVLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDNFVQLLPAA 286
E+ ++ + + +L + G+++ V+ E + WWRGEL+G+ G+FP N+V+LL +
Sbjct: 143 ERVLAMYDFPGPDAGDLGFHAGEVIIVL--EHVNNDWWRGELNGKEGIFPSNYVRLLEDS 200
Query: 285 TAEVEEKKP---ERPSKAATNSIYPILNKYT 202
+ + P + AA++S P+ + T
Sbjct: 201 AVKAQPPPPPPQQNYPPAASSSAPPMQYQQT 231
Score = 35.9 bits (79), Expect = 0.007
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 612 VLGEVEEGWWQGRRQXRVGVFPSNFVVMLD 523
VL V WW+G + G+FPSN+V +L+
Sbjct: 169 VLEHVNNDWWRGELNGKEGIFPSNYVRLLE 198
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 49.2 bits (112), Expect = 7e-07
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = -3
Query: 462 QCRVLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDNFVQL 298
Q R ++++A +L+ +GDI+ ++ + WW G + R G+FP N+V+L
Sbjct: 375 QARAMYSFAGEQPGDLSFQKGDIIDIVERSGSHDDWWTGRIGYREGIFPANYVKL 429
Score = 30.7 bits (66), Expect = 0.26
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 594 EGWWQGRRQXRVGVFPSNFV 535
+ WW GR R G+FP+N+V
Sbjct: 408 DDWWTGRIGYREGIFPANYV 427
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 48.4 bits (110), Expect = 1e-06
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = -3
Query: 465 EQCRVLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDNFVQL 298
E L+ YAA +L+ + GD + V+S+ WW G L+G G FP N+VQL
Sbjct: 410 EHVVALYDYAAQAAGDLSFHAGDRIEVVSRTDNQNEWWIGRLNGAQGQFPGNYVQL 465
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 588 WWQGRRQXRVGVFPSNFV 535
WW GR G FP N+V
Sbjct: 446 WWIGRLNGAQGQFPGNYV 463
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 47.6 bits (108), Expect = 2e-06
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = -3
Query: 456 RVLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDNFV 304
+ L+ Y A +D EL++ EGDI+ V ++ A + GW G L+G G FP N+V
Sbjct: 590 KALYAYTAQSDMELSIQEGDIIQVTNRNAGN-GWSEGILNGVTGQFPANYV 639
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Frame = -3
Query: 456 RVLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGELH----GRVGLFPDNFVQLL 295
R L+ Y A E++LN D + V++++ GWW+G + GR+GLFP N+++ L
Sbjct: 358 RALYAYKATLPSEIDLNVDDTLVVLNRQKD--GWWKGLVVSPTVGRIGLFPSNYIEEL 413
Score = 33.9 bits (74), Expect = 0.028
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = -3
Query: 657 SIPDELNXASATCFEVLGEVEEGWWQG----RRQXRVGVFPSNFVVMLD 523
++P E++ VL ++GWW+G R+G+FPSN++ L+
Sbjct: 366 TLPSEIDLNVDDTLVVLNRQKDGWWKGLVVSPTVGRIGLFPSNYIEELE 414
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = -3
Query: 450 LFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGEL----HGRVGLFPDNFVQ 301
L+ Y A +E++ +GD + V+ + + GWW GE+ + + GLFP NFVQ
Sbjct: 874 LYDYQAQIPEEISFQKGDTLMVLRTQ--EDGWWDGEIINVPNSKRGLFPSNFVQ 925
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -3
Query: 654 IPDELNXASATCFEVLGEVEEGWWQGR----RQXRVGVFPSNFV 535
IP+E++ VL E+GWW G + G+FPSNFV
Sbjct: 881 IPEEISFQKGDTLMVLRTQEDGWWDGEIINVPNSKRGLFPSNFV 924
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 39.5 bits (88), Expect = 6e-04
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = -3
Query: 456 RVLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDN 310
R+ +++ ++EL L +GD++ V+ KE D GWW GE G G+F N
Sbjct: 427 RMKYSFEPETENELKLKKGDLLLVL-KEI-DEGWWVGEKLGEDGVFTGN 473
Score = 33.5 bits (73), Expect = 0.038
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 648 DELNXASATCFEVLGEVEEGWWQGRRQXRVGVFPSN 541
+EL VL E++EGWW G + GVF N
Sbjct: 438 NELKLKKGDLLLVLKEIDEGWWVGEKLGEDGVFTGN 473
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 37.9 bits (84), Expect = 0.002
Identities = 29/108 (26%), Positives = 47/108 (43%)
Frame = -3
Query: 453 VLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDNFVQLLPAATAEV 274
VL+ + A DEL + + ++ VI + WW+ + G+ G+ P NF++ E
Sbjct: 515 VLYDFIAEAADELTV-KANMRVVIVNDTASSDWWKCSVDGKEGVVPSNFIK----PDTEG 569
Query: 273 EEKKPERPSKAATNSIYPILNKYTEKTASVKELTTSKISMHKDNPLSK 130
+ K P SK+ S + AS E + S H+ P SK
Sbjct: 570 DAKSPPSSSKSGQGS-------SLSRRASKHESKHKRDSKHEARPESK 610
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 34.7 bits (76), Expect = 0.016
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3
Query: 657 SIPDELNXASATCFEVLGEVEEGWWQ----GRRQXRVGVFPSNFV 535
+IP+E++ VL E+GWW+ G G FPSNFV
Sbjct: 621 AIPEEISFRKGDTIAVLKLYEDGWWEGFVVGEDDHNRGQFPSNFV 665
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 34.7 bits (76), Expect = 0.016
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -3
Query: 456 RVLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGEL--HGRVGLFPDNFVQLLPAAT 283
R L+ + + +L EGD++ +S D WW G G+FP NFV L T
Sbjct: 12 RALYAWPGEREGDLKFTEGDLIECLS--IGDGKWWIGRHINTNTQGIFPSNFVHCLDIPT 69
Score = 29.5 bits (63), Expect = 0.61
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -3
Query: 645 ELNXASATCFEVLGEVEEGWWQGRR--QXRVGVFPSNFVVMLD 523
+L E L + WW GR G+FPSNFV LD
Sbjct: 24 DLKFTEGDLIECLSIGDGKWWIGRHINTNTQGIFPSNFVHCLD 66
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 33.1 bits (72), Expect = 0.050
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Frame = -3
Query: 456 RVLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRG-------ELHGRVGLFPDNF 307
+ ++++ N+ EL+L+ GD++ V + PD W+ G E G G+FP N+
Sbjct: 285 KAIYSFTGRNEKELDLHTGDVIQVSEQLGPD--WYMGEKVNSKAEKLGNSGMFPVNY 339
>SPAC16E8.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 269
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = -3
Query: 258 ERPSKAATNSIYPILN--KYTEKTASVKELTTSKI----SMHKDNPLSK 130
E+PS+++ +SIY IL K+T + KEL+ +I S H +P+ +
Sbjct: 156 EKPSESSESSIYSILASLKHTNDSLQKKELSPHEIAESPSSHSTSPMGR 204
>SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = -3
Query: 588 WWQGR-RQXRVGVFPSNF 538
WWQGR R G FPSN+
Sbjct: 265 WWQGRKRSGETGWFPSNY 282
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 374 RPPIEAGGGENCTVASGSSPIT 309
RPPI G + T AS S+P+T
Sbjct: 1089 RPPIATSAGRSSTAASTSAPLT 1110
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 322 EPDATVQFSPPPASIGGLLRYNSNDV 399
EP ++ FS PP S+ L + NDV
Sbjct: 183 EPSSSSSFSVPPESLNPTLSFQHNDV 208
>SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 615
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 471 VKEQCRVLFTYA-AVNDDELNLNEGDIVTVISKE 373
+K +C V +A ++ DE+ LNEG + V KE
Sbjct: 213 IKGECVVKLLHAVSMRTDEIKLNEGSVNFVTGKE 246
>SPAC5H10.06c |adh4||alcohol dehydrogenase Adh4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 570 GVDLATSPPLPLLKLQSTSPTXSSI 644
GVD ++ P LPL+ + +T+ T S +
Sbjct: 165 GVDKSSKPQLPLIAINTTAGTASEM 189
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -3
Query: 663 NQSIPDELNXASATCFEVLGEVEEGWWQGRRQXRVGVFPSNFV 535
N S P L ++ V+ +E+GW G + G FP++ +
Sbjct: 13 NSSNPSFLKFSAGDTIIVIEVLEDGWCDGICSEKRGWFPTSCI 55
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.4 bits (53), Expect = 10.0
Identities = 9/39 (23%), Positives = 17/39 (43%)
Frame = -3
Query: 651 PDELNXASATCFEVLGEVEEGWWQGRRQXRVGVFPSNFV 535
P+E+ E++ + GWW + G P+ +V
Sbjct: 1122 PNEMTIKKDEIIEIVQKEPSGWWLALKNGAEGWVPATYV 1160
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,937,294
Number of Sequences: 5004
Number of extensions: 55161
Number of successful extensions: 188
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 408446760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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