Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_B17
(830 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0481 + 8789890-8789949,8790325-8790441,8790532-8790601,879... 41 0.001
04_04_0656 - 26988766-26988830,26989311-26989371,26989514-269895... 39 0.006
08_01_0404 - 3590296-3590409,3590529-3590819,3592414-3592461,359... 33 0.37
05_04_0142 - 18372751-18373338 33 0.37
03_05_0147 - 21268081-21268596 30 2.6
01_06_1076 + 34359922-34360452 30 2.6
12_01_0337 - 2591689-2593839 29 4.5
11_01_0796 - 7000747-7001193 29 4.5
10_08_0575 + 18885403-18885483,18885591-18885949,18886320-18886617 29 6.0
06_01_0470 + 3336154-3336708 29 6.0
05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382 29 6.0
03_06_0158 + 32052426-32052529,32052645-32052702,32052847-320529... 29 6.0
07_03_0035 - 12677942-12678568 28 7.9
>03_02_0481 +
8789890-8789949,8790325-8790441,8790532-8790601,
8790688-8790836,8791520-8791621,8791692-8791892,
8792589-8792651,8792791-8793009,8793681-8793755,
8794003-8794101,8794521-8794691
Length = 441
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -3
Query: 453 VLFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDNFVQLLPAATAEV 274
V+ + A D EL+++ GD V V+ + AP+ GW GE G+ G FP +V+ A A
Sbjct: 328 VIHPFDAQADGELSISVGDYV-VVRQVAPN-GWSEGECKGKAGWFPSAYVEQRDKAPASK 385
Query: 273 EEK 265
+ K
Sbjct: 386 QSK 388
>04_04_0656 -
26988766-26988830,26989311-26989371,26989514-26989588,
26989694-26989849,26989975-26990061,26990140-26990340,
26990942-26991043,26991223-26991374,26991488-26991557,
26991646-26991765,26992708-26992761
Length = 380
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = -3
Query: 450 LFTYAAVNDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFP 316
L ++ A ++ ELNL+ GDIV V ++ GW GE G+ G FP
Sbjct: 316 LDSFKAESESELNLSAGDIVIV--RKISTNGWAEGECKGKAGWFP 358
>08_01_0404 -
3590296-3590409,3590529-3590819,3592414-3592461,
3592559-3592795,3593668-3593704,3594311-3594627
Length = 347
Score = 32.7 bits (71), Expect = 0.37
Identities = 24/87 (27%), Positives = 41/87 (47%)
Frame = -3
Query: 429 NDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDNFVQLLPAATAEVEEKKPERP 250
+DD +N + G+ + +++E D W +G H + L+PD F++ L E+E +
Sbjct: 216 DDDVVNWSHGNELWKLAREPYDPLWIKGGGHCNLELYPD-FIRHLSKFIREMENITTKTR 274
Query: 249 SKAATNSIYPILNKYTEKTASVKELTT 169
K S+ P K + AS TT
Sbjct: 275 LKKIRQSLQPAPKKVHHR-ASTGTTTT 300
>05_04_0142 - 18372751-18373338
Length = 195
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 380 RRRPPIEAGGGENCTVASGSSPITLYSCCLPPQQKLKRRNPNVHQKPRP 234
RR P + GGGE+ A+ +P + C P ++ NP+ + K P
Sbjct: 115 RRERPGDDGGGEDNAGAAARAPAAAWCCVCPDEECRLEANPSANGKEDP 163
>03_05_0147 - 21268081-21268596
Length = 171
Score = 29.9 bits (64), Expect = 2.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 478 RWERWSEFEGCRLRWVEHHNKVRWK 552
RWE+W + G RW+ H + W+
Sbjct: 30 RWEKWRRWGGVGWRWIRHPHGRIWR 54
>01_06_1076 + 34359922-34360452
Length = 176
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 429 NDDELNLNEGDIVTVISKEAPDRGWWRG 346
NDD+L+ N+ D+ ++ RGWWRG
Sbjct: 148 NDDDLDRNDDDLQMTTARWL--RGWWRG 173
>12_01_0337 - 2591689-2593839
Length = 716
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 145 VFVHAYLRRSQLLDRGGFFCVFIEYGI 225
VF+HAY RR L G+F +E G+
Sbjct: 587 VFIHAYCRRGNLYSAYGWFQKMLEEGV 613
>11_01_0796 - 7000747-7001193
Length = 148
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 64 VVNKFLSFILTCVRDCTMCAGLFAE 138
VV L F TCVR C + GLFAE
Sbjct: 58 VVRAVLPFQCTCVRLCAVHGGLFAE 82
>10_08_0575 + 18885403-18885483,18885591-18885949,18886320-18886617
Length = 245
Score = 28.7 bits (61), Expect = 6.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 445 KQHPTLLLYWLRWERWSEFE 504
K HPT+ + W+ WE F+
Sbjct: 74 KSHPTVAMQWINWEELQSFD 93
>06_01_0470 + 3336154-3336708
Length = 184
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -1
Query: 338 TVASGSSPITLYSCCLPPQQKLKRRNPNVHQKPRP 234
+V ++P+ L PP Q+ + +NP+++++P P
Sbjct: 144 SVVGAAAPVPLQPPQPPPPQRRRTKNPDLNREPTP 178
>05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382
Length = 441
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 140 GLSLCMLILDVVNSLTEAVFSVYL-LSMG*IELVAAFDGRSGFFSSTSAVAAGN 298
G++ C+ +++ ++T AV V L +S G +++A +GR F T +A GN
Sbjct: 180 GVNHCVAHVEMGRAVTGAVDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGN 233
>03_06_0158 +
32052426-32052529,32052645-32052702,32052847-32052983,
32053824-32053899,32053965-32054017,32054415-32054896,
32055097-32055184,32055482-32055665,32056443-32056640,
32057351-32057534,32057982-32058109,32058236-32058317,
32058444-32058496,32058625-32058700,32059253-32059314
Length = 654
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 140 GLSLCMLILDVVNSLTEAVFSVYLLSMG*IELVAAFDGRSGFFSSTSAVAAGNNCTKLSG 319
G S + +++N L + +LS + A SG+ S+++A AAG +C G
Sbjct: 534 GTSYSLTEENILNGLGSGLVQSTILSQNTAVVPGADPRHSGYASTSTADAAGTSCPVTDG 593
Query: 320 KSP 328
P
Sbjct: 594 VGP 596
>07_03_0035 - 12677942-12678568
Length = 208
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = -3
Query: 429 NDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDNFVQLLPAATAEVEEKKPERP 250
+D + L G V EA R WWR G V P F ++ A+ RP
Sbjct: 64 DDGVIFLEPGKTVAATRGEADGRRWWRASCSGGVVASPARFGAVMLASPTAANRWFLLRP 123
Query: 249 SK 244
++
Sbjct: 124 AR 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,522,836
Number of Sequences: 37544
Number of extensions: 443839
Number of successful extensions: 1523
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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