Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_B12
(816 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 229 2e-60
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 229 2e-60
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 229 2e-60
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 229 2e-60
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 229 2e-60
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 229 2e-60
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 229 2e-60
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 229 2e-60
AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical ... 28 9.2
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 229 bits (559), Expect = 2e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKSCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++ +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/78 (48%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -1
Query: 783 LLNRDKEGSHYGIQLNXVPXRTK*MD--QRHXEKPIPVDSVFAQDEMIDCIXXXXXXXXX 610
L R K+ IQ+N K +D + H EK + VD+VFAQDEMID I
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQK-VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 229
Query: 609 XXTSRWHTKKLPRKTHQG 556
TSRWHTKKLPRKTH+G
Sbjct: 230 GVTSRWHTKKLPRKTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 229 bits (559), Expect = 2e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKSCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++ +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/78 (48%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -1
Query: 783 LLNRDKEGSHYGIQLNXVPXRTK*MD--QRHXEKPIPVDSVFAQDEMIDCIXXXXXXXXX 610
L R K+ IQ+N K +D + H EK + VD+VFAQDEMID I
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQK-VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 229
Query: 609 XXTSRWHTKKLPRKTHQG 556
TSRWHTKKLPRKTH+G
Sbjct: 230 GVTSRWHTKKLPRKTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 229 bits (559), Expect = 2e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKSCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++ +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/78 (48%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -1
Query: 783 LLNRDKEGSHYGIQLNXVPXRTK*MD--QRHXEKPIPVDSVFAQDEMIDCIXXXXXXXXX 610
L R K+ IQ+N K +D + H EK + VD+VFAQDEMID I
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQK-VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 131
Query: 609 XXTSRWHTKKLPRKTHQG 556
TSRWHTKKLPRKTH+G
Sbjct: 132 GVTSRWHTKKLPRKTHKG 149
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 229 bits (559), Expect = 2e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKSCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++ +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -1
Query: 669 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 556
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 229 bits (559), Expect = 2e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKSCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++ +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/78 (48%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -1
Query: 783 LLNRDKEGSHYGIQLNXVPXRTK*MD--QRHXEKPIPVDSVFAQDEMIDCIXXXXXXXXX 610
L R K+ IQ+N K +D + H EK + VD+VFAQDEMID I
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQK-VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 229
Query: 609 XXTSRWHTKKLPRKTHQG 556
TSRWHTKKLPRKTH+G
Sbjct: 230 GVTSRWHTKKLPRKTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 229 bits (559), Expect = 2e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKSCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++ +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/78 (48%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -1
Query: 783 LLNRDKEGSHYGIQLNXVPXRTK*MD--QRHXEKPIPVDSVFAQDEMIDCIXXXXXXXXX 610
L R K+ IQ+N K +D + H EK + VD+VFAQDEMID I
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQK-VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 131
Query: 609 XXTSRWHTKKLPRKTHQG 556
TSRWHTKKLPRKTH+G
Sbjct: 132 GVTSRWHTKKLPRKTHKG 149
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 229 bits (559), Expect = 2e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKSCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++ +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -1
Query: 669 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 556
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 229 bits (559), Expect = 2e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = -2
Query: 584 RSYPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKSCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++ +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/78 (48%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -1
Query: 783 LLNRDKEGSHYGIQLNXVPXRTK*MD--QRHXEKPIPVDSVFAQDEMIDCIXXXXXXXXX 610
L R K+ IQ+N K +D + H EK + VD+VFAQDEMID I
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQK-VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFK 229
Query: 609 XXTSRWHTKKLPRKTHQG 556
TSRWHTKKLPRKTH+G
Sbjct: 230 GVTSRWHTKKLPRKTHKG 247
>AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical
protein R02D3.7 protein.
Length = 479
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = -3
Query: 154 RRLTRLHSWVHS--RRIVFA----KKLRLPQPQRGCCAALSVVRENKHLTMQKK 11
R +T++H+W + ++ A KK R CC + R KHL KK
Sbjct: 32 RHMTQIHNWTTEDCQELIAAIKSEKKSRASSTSFVCCHCRMIFRSVKHLVQHKK 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,170,127
Number of Sequences: 27780
Number of extensions: 413384
Number of successful extensions: 1021
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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