Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_B09
         (800 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.62 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.5  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   4.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   7.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   7.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   7.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 421  NDEAGDLMTVPSGPILVSRTGA 356
            ND+  D +T P  P+ +SR G+
Sbjct: 1387 NDDGSDRLTSPPTPLSISRAGS 1408


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 234 CNDSPAEATSPENGW 190
           C D P E   PE+GW
Sbjct: 642 CRDIPEEFLRPESGW 656


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +3

Query: 405 SPASSFE*AGVLTHLKFENRLRSFRPQCL*SFALPDETVLKFYIDASYPEGN 560
           S A+S E   + TH +  ++LR  R     S  L DE   K +  ++  EGN
Sbjct: 220 STAASDEDISLTTHQQKRHKLRVTRCYSSDSAVLSDEDQTKGWDGSNMVEGN 271


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 693 CLVXSKFRGYPDGG 652
           CL+  KF GY DGG
Sbjct: 65  CLI-KKFNGYDDGG 77


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 597 LSPLYPVPTID 629
           LSP+YP P +D
Sbjct: 71  LSPIYPSPMVD 81


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 35  ICTDGGSKRAHAQTLLRSPSRTSYSLRLNDTKLKI*HH 148
           +C    S+       L SP R   + R+N TKLK  HH
Sbjct: 120 LCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKR-HH 156


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 597 LSPLYPVPTID 629
           LSP+YP P +D
Sbjct: 71  LSPIYPSPMVD 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,357
Number of Sequences: 438
Number of extensions: 4804
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)