Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_B08
(785 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens ... 36 0.13
BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.22
BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.22
AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein pr... 36 0.22
AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein pr... 36 0.22
AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens ... 36 0.22
BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein. 35 0.38
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 33 0.88
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 33 0.88
AL162741-4|CAI23246.1| 255|Homo sapiens tumor necrosis factor r... 32 2.0
AF241229-1|AAF63506.1| 255|Homo sapiens GITR-D protein. 32 2.0
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 32 2.7
U34051-1|AAC50278.1| 367|Homo sapiens cyclin-dependent kinase 5... 31 4.7
DQ307839-1|ABB96255.1| 367|Homo sapiens cyclin-dependent kinase... 31 4.7
BC041771-1|AAH41771.1| 367|Homo sapiens cyclin-dependent kinase... 31 4.7
AC097468-1|AAX88916.1| 367|Homo sapiens unknown protein. 31 4.7
X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein. 31 6.2
BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein. 31 6.2
BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adap... 31 6.2
AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1 prot... 31 6.2
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 27 7.0
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 27 7.8
BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein. 30 8.2
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 30 8.2
BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein. 30 8.2
BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein. 30 8.2
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 8.2
AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein. 30 8.2
AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein. 30 8.2
AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein p... 30 8.2
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 8.2
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 30 8.2
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 30 8.2
AB014519-1|BAA31594.2| 1428|Homo sapiens KIAA0619 protein protein. 30 8.2
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 8.2
>AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ39402 fis, clone PLACE6011975. ).
Length = 180
Score = 36.3 bits (80), Expect = 0.13
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 188 RGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSV-RQPVGPPRRCRWC 364
RG+ + GG P L G HP +P EP R E + + SV P GP R R C
Sbjct: 83 RGRRQGQGGGAPALLLPRPGCRHPHPPRP-EPRLRAEPGKVTGASVPAPPSGPLPRLRPC 141
Query: 365 PG 370
G
Sbjct: 142 CG 143
>BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein
protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein
protein.
Length = 165
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 78 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 110
>AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ25530 fis, clone CBR07652. ).
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 305
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein.
Length = 276
Score = 34.7 bits (76), Expect = 0.38
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Frame = +2
Query: 200 PDEVGGLPRSTLQPDGAAHPKDA-----QPTEPSRRIEGSETSAVSVRQPVGPPRRCRWC 364
P++ G L S L P K QP P R + G E +R +GP + C+
Sbjct: 138 PEQPGPLTPSLLGPGRPRQQKQPLMGPEQPCPPKRPLMGPEQPCQPLRPLMGPNKPCKPQ 197
Query: 365 PGIPRWTRTSLPGRDAIHRRPV--ALITPRQRARVLVAHR 478
P +P R SL G+ RP+ L PR+ LV R
Sbjct: 198 PLLPIPDRPSLLGQPGPPCRPLLGLLCQPRRSLLDLVPAR 237
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.88
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -2
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLP 326
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.88
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -2
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLP 326
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AL162741-4|CAI23246.1| 255|Homo sapiens tumor necrosis factor
receptor superfamily, member 18 protein.
Length = 255
Score = 32.3 bits (70), Expect = 2.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 239 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 379
P+ A+ P+ + ++ RR G ET +P GPP PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191
>AF241229-1|AAF63506.1| 255|Homo sapiens GITR-D protein.
Length = 255
Score = 32.3 bits (70), Expect = 2.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 239 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 379
P+ A+ P+ + ++ RR G ET +P GPP PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 2.7
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 308 TSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 424
T V + Q PP RW P W RT LP R+ RR
Sbjct: 2103 TQRVDLYQQASPPDALRWIP--KPWERTGLPPREGPSRR 2139
>U34051-1|AAC50278.1| 367|Homo sapiens cyclin-dependent kinase 5
activator isoform p39i protein.
Length = 367
Score = 31.1 bits (67), Expect = 4.7
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = -3
Query: 594 SVAVEPGAGGGNTPVRPGPCRWRSPPXXXXXXXXXXXXARCATSTLARCRGVIRATGRRC 415
+ A PG+GGG P P P +PP + +T L RC G RRC
Sbjct: 143 AAAQPPGSGGGKPPPPPPPAPQVAPP--VPGGSPRRVIVQASTGELLRCLGDF--VCRRC 198
Query: 414 IASR---PGRLVLVQRGI 370
+ PG LV RG+
Sbjct: 199 YRLKELSPGELVGWFRGV 216
>DQ307839-1|ABB96255.1| 367|Homo sapiens cyclin-dependent kinase 5,
regulatory subunit 2 (p39) protein.
Length = 367
Score = 31.1 bits (67), Expect = 4.7
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = -3
Query: 594 SVAVEPGAGGGNTPVRPGPCRWRSPPXXXXXXXXXXXXARCATSTLARCRGVIRATGRRC 415
+ A PG+GGG P P P +PP + +T L RC G RRC
Sbjct: 143 AAAQPPGSGGGKPPPPPPPAPQVAPP--VPGGSPRRVIVQASTGELLRCLGDF--VCRRC 198
Query: 414 IASR---PGRLVLVQRGI 370
+ PG LV RG+
Sbjct: 199 YRLKELSPGELVGWFRGV 216
>BC041771-1|AAH41771.1| 367|Homo sapiens cyclin-dependent kinase 5,
regulatory subunit 2 (p39) protein.
Length = 367
Score = 31.1 bits (67), Expect = 4.7
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = -3
Query: 594 SVAVEPGAGGGNTPVRPGPCRWRSPPXXXXXXXXXXXXARCATSTLARCRGVIRATGRRC 415
+ A PG+GGG P P P +PP + +T L RC G RRC
Sbjct: 143 AAAQPPGSGGGKPPPPPPPAPQVAPP--VPGGSPRRVIVQASTGELLRCLGDF--VCRRC 198
Query: 414 IASR---PGRLVLVQRGI 370
+ PG LV RG+
Sbjct: 199 YRLKELSPGELVGWFRGV 216
>AC097468-1|AAX88916.1| 367|Homo sapiens unknown protein.
Length = 367
Score = 31.1 bits (67), Expect = 4.7
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = -3
Query: 594 SVAVEPGAGGGNTPVRPGPCRWRSPPXXXXXXXXXXXXARCATSTLARCRGVIRATGRRC 415
+ A PG+GGG P P P +PP + +T L RC G RRC
Sbjct: 143 AAAQPPGSGGGKPPPPPPPAPQVAPP--VPGGSPRRVIVQASTGELLRCLGDF--VCRRC 198
Query: 414 IASR---PGRLVLVQRGI 370
+ PG LV RG+
Sbjct: 199 YRLKELSPGELVGWFRGV 216
>X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein.
Length = 223
Score = 30.7 bits (66), Expect = 6.2
Identities = 36/127 (28%), Positives = 45/127 (35%), Gaps = 7/127 (5%)
Frame = +2
Query: 230 TLQPDGAAHPKDAQPTEPSR---RIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLP 400
T P G P +Q P R R+ R P PR R P PR + P
Sbjct: 15 TRAPSGPRPPSRSQAQTPPRSVPRLRPRHRHPQDPRSPGPAPRHRR--P--PRPDPRAPP 70
Query: 401 GRDAIHR-RPVALITPRQRARVLVAHRXXXXXXXXXXXXXG---GDRHLQGPGRTGVFPP 568
R + R R T +R R+ HR G GDR +GP R+ PP
Sbjct: 71 ARASYRRFRTWPSATSWERRRLSPGHRALARGPPARLGGEGPGAGDRRREGPDRSPRQPP 130
Query: 569 PAPGSTA 589
P + A
Sbjct: 131 VLPAAAA 137
>BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein.
Length = 134
Score = 30.7 bits (66), Expect = 6.2
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 287 RRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSL 397
R +EG + S VRQPV P R R PG PR + +L
Sbjct: 96 RALEGPQGSEGQVRQPVLPGVRERRVPGQPRRRKAAL 132
>BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adaptor
molecule 1 protein.
Length = 670
Score = 30.7 bits (66), Expect = 6.2
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 206 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 334
E+GGLPR++ +P+ + P K QP P R+ E SAV R P
Sbjct: 325 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 370
>AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1
protein.
Length = 718
Score = 30.7 bits (66), Expect = 6.2
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 206 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 334
E+GGLPR++ +P+ + P K QP P R+ E SAV R P
Sbjct: 373 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 418
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 26.6 bits (56), Expect(2) = 7.0
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 421 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 335
+V + PT Q AG GP+G A SG PD
Sbjct: 1829 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 1858
Score = 22.2 bits (45), Expect(2) = 7.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 352 PSGRPDGLPYRDG 314
PSG P G PY G
Sbjct: 1879 PSGEPPGTPYFSG 1891
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 26.6 bits (56), Expect(2) = 7.8
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 421 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 335
+V + PT Q AG GP+G A SG PD
Sbjct: 52 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 81
Score = 22.2 bits (45), Expect(2) = 7.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 352 PSGRPDGLPYRDG 314
PSG P G PY G
Sbjct: 102 PSGEPPGTPYFSG 114
>BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein.
Length = 132
Score = 30.3 bits (65), Expect = 8.2
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +2
Query: 344 PRRCRWCPGIPRWT--RTSLPGR 406
P RC W PG P T RT+ PGR
Sbjct: 106 PSRCAWSPGFPITTPSRTAFPGR 128
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 30.3 bits (65), Expect = 8.2
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 132 SPPTKRLPRHSYTRRPIPSEVRTRMR*GGYRGQHYNQTARLTPRTPSRRSLRGESK 299
SP +R S RR S RT R G R + + R RTP+RRS R S+
Sbjct: 629 SPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSR 684
>BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 239 PDGAAHPKDAQP--TEPSRRIEGSETSAVSVRQPVGPPRR 352
P A P+ +P + PS R++ S +A P GPPRR
Sbjct: 29 PRQAGRPRHPRPRASSPSPRVQRSRPAASPYAGPAGPPRR 68
>BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 239 PDGAAHPKDAQP--TEPSRRIEGSETSAVSVRQPVGPPRR 352
P A P+ +P + PS R++ S +A P GPPRR
Sbjct: 29 PRQAGRPRHPRPRASSPSPRVQRSRPAASPYAGPAGPPRR 68
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 30.3 bits (65), Expect = 8.2
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 132 SPPTKRLPRHSYTRRPIPSEVRTRMR*GGYRGQHYNQTARLTPRTPSRRSLRGESK 299
SP +R S RR S RT R G R + + R RTP+RRS R S+
Sbjct: 629 SPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSR 684
>AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein.
Length = 1321
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 466 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 344
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AC003110-2|AAB86655.1| 990|Homo sapiens PGCN_HUMAN protein.
Length = 990
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 466 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 344
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 720 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 759
>AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein
protein.
Length = 1335
Score = 30.3 bits (65), Expect = 8.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 466 QHSSALPWSD*SDRSTVYRVPTRQAGSGPAGYSGTPAAPSG 344
+HSS+ PW + V VPT A + P G G P + SG
Sbjct: 734 EHSSSSPWPSVNRNVAVGFVPTETA-TEPTGLRGIPGSESG 773
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 30.3 bits (65), Expect = 8.2
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 132 SPPTKRLPRHSYTRRPIPSEVRTRMR*GGYRGQHYNQTARLTPRTPSRRSLRGESK 299
SP +R S RR S RT R G R + + R RTP+RRS R S+
Sbjct: 629 SPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSR 684
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 30.3 bits (65), Expect = 8.2
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 132 SPPTKRLPRHSYTRRPIPSEVRTRMR*GGYRGQHYNQTARLTPRTPSRRSLRGESK 299
SP +R S RR S RT R G R + + R RTP+RRS R S+
Sbjct: 594 SPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSR 649
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 30.3 bits (65), Expect = 8.2
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 132 SPPTKRLPRHSYTRRPIPSEVRTRMR*GGYRGQHYNQTARLTPRTPSRRSLRGESK 299
SP +R S RR S RT R G R + + R RTP+RRS R S+
Sbjct: 419 SPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSR 474
>AB014519-1|BAA31594.2| 1428|Homo sapiens KIAA0619 protein protein.
Length = 1428
Score = 30.3 bits (65), Expect = 8.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 151 SPATLTPDVRSPPRSEP---G*GRGATAVNTTTRRRGSPQGRPADGAFEANRR 300
S A L P+ P R EP G G + T + G+P+ P DGA + +R
Sbjct: 16 SGAVLGPEAAGPEREEPECGSSGGGMSRPPPTGKMPGAPETAPGDGAGASRQR 68
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.3 bits (65), Expect = 8.2
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 132 SPPTKRLPRHSYTRRPIPSEVRTRMR*GGYRGQHYNQTARLTPRTPSRRSLRGESK 299
SP +R S RR S RT R G R + + R RTP+RRS R S+
Sbjct: 677 SPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSR 732
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,761,482
Number of Sequences: 237096
Number of extensions: 2531696
Number of successful extensions: 10212
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 8328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10153
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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