Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_B08
         (785 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1832|AAF55042.1|  588|Drosophila melanogaster CG3259-PA...    32   1.0  
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA...    29   7.2  
AL133503-6|CAB72241.1| 1009|Drosophila melanogaster EG:BACH48C10...    29   9.5  
AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB...    29   9.5  
AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA...    29   9.5  

>AE014297-1832|AAF55042.1|  588|Drosophila melanogaster CG3259-PA
           protein.
          Length = 588

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 182 PLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRR 292
           PL  +N  EV   PR++L+P  +A P  A+P  P RR
Sbjct: 352 PLTRENSKEVNQRPRTSLRPP-SARPASARPGAPRRR 387


>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
           protein.
          Length = 1976

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 412 RVPTRQAGSGPAGYSGTPAAPSGRPDGLP 326
           R PTR  G+G +G S  P+ P  +P   P
Sbjct: 329 RKPTRTPGTGSSGGSSKPSKPKRKPTSKP 357


>AL133503-6|CAB72241.1| 1009|Drosophila melanogaster EG:BACH48C10.4
           protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +2

Query: 242 DGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHR 421
           +G A P ++    P    EGSE    S     G  RR   CP  PRW R      +A   
Sbjct: 707 NGKADPPESTHPAPVAA-EGSELPGCSASTIDGCARRTH-CPNAPRWMRPKPKAGNAAGP 764

Query: 422 RP 427
           +P
Sbjct: 765 QP 766


>AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB,
            isoform B protein.
          Length = 1535

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +2

Query: 242  DGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHR 421
            +G A P ++    P    EGSE    S     G  RR   CP  PRW R      +A   
Sbjct: 1162 NGKADPPESTHPAPVAA-EGSELPGCSASTIDGCARRTH-CPNAPRWMRPKPKAGNAAGP 1219

Query: 422  RP 427
            +P
Sbjct: 1220 QP 1221


>AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA,
            isoform A protein.
          Length = 1395

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +2

Query: 242  DGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHR 421
            +G A P ++    P    EGSE    S     G  RR   CP  PRW R      +A   
Sbjct: 1022 NGKADPPESTHPAPVAA-EGSELPGCSASTIDGCARRTH-CPNAPRWMRPKPKAGNAAGP 1079

Query: 422  RP 427
            +P
Sbjct: 1080 QP 1081


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,966,552
Number of Sequences: 53049
Number of extensions: 718922
Number of successful extensions: 3432
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3427
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)