Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_B03
(792 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0309 + 16666047-16666543,16666626-16666836,16666925-166670... 31 0.79
01_01_1169 + 9313135-9313332,9313496-9314229,9314933-9317036 31 1.0
01_06_0258 + 27950196-27950749,27953670-27954570 31 1.4
04_04_0437 + 25193263-25194627 30 2.4
02_02_0061 + 6468190-6471046,6471318-6471736 30 2.4
04_04_1694 - 35419278-35419565,35419744-35419861,35420404-354204... 29 3.2
01_01_0735 + 5730783-5733320 24 4.8
11_01_0798 + 7026509-7029272,7031573-7031994 29 5.6
04_04_1029 + 30243218-30244163,30246090-30246254,30246775-30247985 29 5.6
02_03_0411 - 18739279-18739902,18741471-18741671 29 5.6
02_01_0404 - 2945611-2948802 29 5.6
01_06_0698 - 31311529-31312055,31312160-31312346 29 5.6
01_01_1168 - 9305084-9307172,9307751-9308460,9308624-9308821 29 5.6
07_01_0956 + 8029297-8030285,8033204-8033330,8033350-8033640 28 7.4
01_06_1740 - 39575614-39576981 28 7.4
01_06_0957 - 33352904-33353212,33353316-33353465,33353544-333536... 28 7.4
12_02_1069 + 25801309-25801433,25802429-25802620,25803130-258031... 28 9.8
08_01_0821 + 7966587-7966832 28 9.8
06_03_0416 + 20568087-20568702,20568767-20570313 28 9.8
05_01_0062 + 440239-440325,441107-441183,441416-441643,441953-44... 28 9.8
01_03_0264 - 14419381-14419431,14419807-14419875,14420771-144208... 28 9.8
>10_08_0309 +
16666047-16666543,16666626-16666836,16666925-16667035,
16667130-16667918
Length = 535
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 478 YNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGKQGGAPVPR 350
YN D EL E A+ LK + V+S+ N+G P+PR
Sbjct: 129 YNFDGYVELMEMARKTGLKVQAVMSFHQCGGNVGDSVNIPLPR 171
>01_01_1169 + 9313135-9313332,9313496-9314229,9314933-9317036
Length = 1011
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 478 YNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGKQGGAP 359
Y + EL R KLFP +++V +D + QGGAP
Sbjct: 900 YQSYMGRELHFREKLFPRLKQLIVDNMPNLDELSFQGGAP 939
>01_06_0258 + 27950196-27950749,27953670-27954570
Length = 484
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = -2
Query: 365 CSRAASRDTPSPRSPGSTDRMCPLKRTRA*RCFARASWSYPPSSGATWTSTLAKPKTLSA 186
C RAA+ + SPR+ S P R R +W+ P S AT +L P +L+A
Sbjct: 115 CHRAAAAASASPRNASSLPAPAPASPRRTFRPDKSRTWAPIPCSSATCRESL--PFSLAA 172
Query: 185 RRRLKHSSTPLNP 147
+TP NP
Sbjct: 173 ------CATPANP 179
>04_04_0437 + 25193263-25194627
Length = 454
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 649 DSPVYEYDVESNELIGSSPTSIARISSTLIVTRTTSQDVYTCL 521
DSPV + +N G P SIAR+++TL + + CL
Sbjct: 252 DSPVNYLSLANNNFTGEIPKSIARMANTLFEVLFLNNKLSGCL 294
>02_02_0061 + 6468190-6471046,6471318-6471736
Length = 1091
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 715 TTIELTCEAAGXPAPSVHWFKNDSPVYEYDVESNELIGSSPTSIARISS 569
T+++L+ P P N + ++ VE+NEL GS P+SI +SS
Sbjct: 259 TSLDLSSNNLVGPVPDT--IGNLYSIKQFHVENNELEGSLPSSIFNLSS 305
>04_04_1694 -
35419278-35419565,35419744-35419861,35420404-35420490,
35420909-35420931,35421647-35421843,35421964-35422159,
35422382-35422481,35423288-35423374,35424053-35424282,
35424678-35424763,35425148-35425271,35425415-35428573,
35430014-35430019
Length = 1566
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +3
Query: 75 YLTGTSILSIHDAFGSSSFFLSSTRV*RGRRMF*PSPSRKRFRLGKCTRPCRSRGGRI*P 254
+L G +L++H + +SSF S V R +F PSP P + P
Sbjct: 53 FLFGEDLLAMHHSAAASSFDRSQPEVQVFRDVFSPSPPLLHVAETSSLLPTAAAAAPAPP 112
Query: 255 ARPSEAPS 278
P+ APS
Sbjct: 113 PPPAPAPS 120
>01_01_0735 + 5730783-5733320
Length = 845
Score = 24.2 bits (50), Expect(2) = 4.8
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -1
Query: 402 IAPTWTTSANRVVLPCRVKGHPKPKITWFNG 310
++ W+++ +R VL C V G+ K+++ G
Sbjct: 34 VSRVWSSNTSRDVLLCSVPGNGNEKLSFAAG 64
Score = 23.0 bits (47), Expect(2) = 4.8
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = -1
Query: 333 PKITWFNGQNVPIEKNPRMKVLRSGELVIS----SLLWS 229
P + W +++ +N + SG+LV++ S++WS
Sbjct: 88 PVVVWSANRDLAAHQNATLSFTASGDLVLANADGSVVWS 126
>11_01_0798 + 7026509-7029272,7031573-7031994
Length = 1061
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = -3
Query: 703 LTCEAAGXPAPSVHWFKNDSPVYEYDVESNELIGSSPTSIARISS--TLIVT 554
L+ + P+P++ S + + ++ SN+L G P+SIA +++ TL+V+
Sbjct: 454 LSGDVPANPSPAMAAASQSSQLAQLNLSSNQLSGPLPSSIANLTALQTLLVS 505
>04_04_1029 + 30243218-30244163,30246090-30246254,30246775-30247985
Length = 773
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 603 PINSLDSTSYSXTGESFLNQCTDG-AGXPAASQVNSIVVPGVCAYXGRGPCVIDKY 767
P S+ + + G S++ +C +G G P + N VCA+ R PC+ +Y
Sbjct: 280 PCGSMSTCNDVYNGTSYICRCNEGYEGNPY--EQNGCSGLDVCAHPERNPCMYPEY 333
>02_03_0411 - 18739279-18739902,18741471-18741671
Length = 274
Score = 28.7 bits (61), Expect = 5.6
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -2
Query: 359 RAASRDTPSP--RSPGSTDRMCPLKRTRA*RCFARASWSYPPSSGATWTSTLAKPKTLSA 186
R++S +PSP RS S+ R C R R A A+ S SSG T S++ +A
Sbjct: 87 RSSSAYSPSPASRSASSSSRRCSRARGRGGGGGAAAAASTTTSSGYTSVSSVGAVTAAAA 146
Query: 185 RRRLKHSS 162
R SS
Sbjct: 147 AWRSHDSS 154
>02_01_0404 - 2945611-2948802
Length = 1063
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -3
Query: 661 WFKNDSPVYEYDVESNELIGSSPTSIARISSTLIVTRTTSQD 536
W K ++ D+ +N LIG P S+ + + TT D
Sbjct: 500 WIKRLESLFHLDLSNNSLIGGIPASLMEMPMLITKKNTTRLD 541
>01_06_0698 - 31311529-31312055,31312160-31312346
Length = 237
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 252 PARPSEAPSCAGSFQWAHSVR*TR*SWAW-GVP*RGTGAPPCLP 380
P +PSEAP AG+ S SW+W P G PP LP
Sbjct: 137 PTKPSEAPEPAGAAGPVSSK-----SWSWQAFPPAGATTPPPLP 175
>01_01_1168 - 9305084-9307172,9307751-9308460,9308624-9308821
Length = 998
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 457 ELSERAKLFPLKPRIVVSYSTYVDNIGKQGGAP 359
EL R KLFP +++V ++ + QGGAP
Sbjct: 894 ELRFREKLFPRLKQLIVDNLPNIEELSFQGGAP 926
>07_01_0956 + 8029297-8030285,8033204-8033330,8033350-8033640
Length = 468
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = -2
Query: 347 RDTPSPRSPGSTDRMCPLKRTRA*RCFARASWSYPPSSGATWTSTLAKPKTLSARRRLKH 168
R T S R +D+ C R +R + +S + T+++A P + SAR R H
Sbjct: 216 RRTHSSRVVPGSDKPCVTSRP------SRFDYIGSSASSISMTASIASPSSSSARPRAPH 269
Query: 167 SSTP 156
S+ P
Sbjct: 270 STAP 273
>01_06_1740 - 39575614-39576981
Length = 455
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 300 PIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFG 187
P+ + PR VLRS LV+S + + D Y Q + G
Sbjct: 369 PLHEGPRGSVLRSVHLVVSEVTMTQEDVYEWQNATSKG 406
>01_06_0957 -
33352904-33353212,33353316-33353465,33353544-33353684,
33354116-33354709
Length = 397
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 278 MRGFFSMGTFCPLNQVILGLGCPLTRHGSTTLF 376
M G F +G LN V+L +G P STT+F
Sbjct: 271 MSGLFGIGGGLLLNPVLLQIGVPPKTASSTTMF 303
>12_02_1069 +
25801309-25801433,25802429-25802620,25803130-25803159,
25803426-25803500,25803599-25804373,25804549-25804614,
25804746-25804811,25804898-25805140,25805407-25805502
Length = 555
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = -2
Query: 371 GWCSRAASRD-----TPSPRSPGSTDRMCPLKRTRA*RCFARASWSYPPSSGATWTSTLA 207
GW R S+ TPS S ++ CP+K+T+ FA A+ S S+ +T L+
Sbjct: 32 GWMIRCFSKRVGIQFTPSAASAAASASSCPVKKTQCPCSFAVAT-SISSSTCTHFTPQLS 90
Query: 206 KPKTLSARRRLK 171
LS++ + K
Sbjct: 91 SAHLLSSQLKEK 102
>08_01_0821 + 7966587-7966832
Length = 81
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 380 RQTGWCSRAASRDTPSPRSPGSTDR 306
R GWC R+T S ++PG+ R
Sbjct: 9 RAMGWCGAEEERETASRKAPGACPR 33
>06_03_0416 + 20568087-20568702,20568767-20570313
Length = 720
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = -1
Query: 333 PKITWFNGQNVPIEKNPRMKVLRSGELVI----SSLLWS 229
P+I WF ++ P+ +N ++ G+LV+ +L+WS
Sbjct: 90 PEIVWFANRDHPVGENATVQFTELGDLVLYDADGTLVWS 128
>05_01_0062 +
440239-440325,441107-441183,441416-441643,441953-442176,
442250-442398,443102-443279,443348-443428,443523-443669,
443759-444483
Length = 631
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 286 VLFNGHILSVEPGDLGLGVSLDAAREHHPV 375
+ NG+ V+ GDLGL LD AR H +
Sbjct: 175 IFVNGNQGEVKIGDLGLATILDNARSAHSI 204
>01_03_0264 -
14419381-14419431,14419807-14419875,14420771-14420817,
14421340-14422474
Length = 433
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 652 NDSPVYEYDVESNELIGSSPTSIARI 575
N + +YE DV +N L+G+ P ++ R+
Sbjct: 160 NMTRLYELDVSNNRLVGAFPGAVLRV 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,218,538
Number of Sequences: 37544
Number of extensions: 427349
Number of successful extensions: 1452
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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