Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_B03
(792 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 48 8e-08
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 48 8e-08
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 48 1e-07
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 36 3e-04
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 27 0.15
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 48.4 bits (110), Expect = 8e-08
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = -1
Query: 390 WTTSANRVVLPCRVKGHPKPKITWFNGQNVPI--EKNPRMKVLRSGELVISSLLWSDMDE 217
W SA L C G P + W+ GQ I + +++L SGEL++S+L D +
Sbjct: 1327 WRGSAT---LACNAVGDPTRE--WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGD 1381
Query: 216 YTCQAENAFGSEK 178
YTCQ ENA G++K
Sbjct: 1382 YTCQVENAQGNDK 1394
Score = 35.1 bits (77), Expect = 8e-04
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = -1
Query: 369 VVLPCRVKGHPKPKITWF------NGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTC 208
V L C+ +G P P I W +G+ + + K+L +G L++ + Y C
Sbjct: 727 VALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLC 786
Query: 207 QAENAFGS 184
QA N GS
Sbjct: 787 QASNGIGS 794
Score = 33.9 bits (74), Expect = 0.002
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Frame = -1
Query: 363 LPCRVKGHPKPKITWFNGQNVPIEK--NPRMKVLRS-------GELVISSLLWSDMDEYT 211
L C V G +TW G + + N R+ V R +L ISS SD Y
Sbjct: 827 LHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYF 886
Query: 210 CQAENAFGSEK 178
CQA N +G ++
Sbjct: 887 CQASNLYGRDQ 897
Score = 33.1 bits (72), Expect = 0.003
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Frame = -1
Query: 369 VVLPCRVKGHPKPKITW-FNGQNVPIEKNPRM--KVLRSGELV----ISSLLWSDMDEYT 211
V L C G+P P++TW +G +P + V G+++ IS ++ D EY+
Sbjct: 439 VSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYS 498
Query: 210 CQAENAFG 187
C AEN G
Sbjct: 499 CMAENRAG 506
Score = 31.1 bits (67), Expect = 0.012
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 721 PGTTIELTCEAAGXPAPSVHW 659
PG + L C AAG P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 29.1 bits (62), Expect = 0.050
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Frame = -1
Query: 363 LPCRVKGHPKPKITWFNGQNVPIEKNPRM-KVLRSGELVI----SSLLWSDMDE--YTCQ 205
L C G P I W P+ P + +VLR+G LV+ ++ D+ Y C
Sbjct: 50 LDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVLLPFPAAAFRQDVHSAAYRCV 109
Query: 204 AENAFG 187
A N+ G
Sbjct: 110 ASNSVG 115
Score = 25.8 bits (54), Expect = 0.46
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = -3
Query: 742 LPXYAHTPGTTIELTCEAAGXPAPSVHW 659
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 709 IELTCEAAGXPAPSVHWFK 653
+ L C+A G P P++ W K
Sbjct: 727 VALHCQAQGVPTPTIVWKK 745
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 48.4 bits (110), Expect = 8e-08
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = -1
Query: 390 WTTSANRVVLPCRVKGHPKPKITWFNGQNVPI--EKNPRMKVLRSGELVISSLLWSDMDE 217
W SA L C G P + W+ GQ I + +++L SGEL++S+L D +
Sbjct: 1323 WRGSAT---LACNAVGDPTRE--WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGD 1377
Query: 216 YTCQAENAFGSEK 178
YTCQ ENA G++K
Sbjct: 1378 YTCQVENAQGNDK 1390
Score = 35.1 bits (77), Expect = 8e-04
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = -1
Query: 369 VVLPCRVKGHPKPKITWF------NGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTC 208
V L C+ +G P P I W +G+ + + K+L +G L++ + Y C
Sbjct: 723 VALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLC 782
Query: 207 QAENAFGS 184
QA N GS
Sbjct: 783 QASNGIGS 790
Score = 33.9 bits (74), Expect = 0.002
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Frame = -1
Query: 363 LPCRVKGHPKPKITWFNGQNVPIEK--NPRMKVLRS-------GELVISSLLWSDMDEYT 211
L C V G +TW G + + N R+ V R +L ISS SD Y
Sbjct: 823 LHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYF 882
Query: 210 CQAENAFGSEK 178
CQA N +G ++
Sbjct: 883 CQASNLYGRDQ 893
Score = 33.1 bits (72), Expect = 0.003
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Frame = -1
Query: 369 VVLPCRVKGHPKPKITW-FNGQNVPIEKNPRM--KVLRSGELV----ISSLLWSDMDEYT 211
V L C G+P P++TW +G +P + V G+++ IS ++ D EY+
Sbjct: 439 VSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYS 498
Query: 210 CQAENAFG 187
C AEN G
Sbjct: 499 CMAENRAG 506
Score = 31.1 bits (67), Expect = 0.012
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 721 PGTTIELTCEAAGXPAPSVHW 659
PG + L C AAG P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 29.1 bits (62), Expect = 0.050
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Frame = -1
Query: 363 LPCRVKGHPKPKITWFNGQNVPIEKNPRM-KVLRSGELVI----SSLLWSDMDE--YTCQ 205
L C G P I W P+ P + +VLR+G LV+ ++ D+ Y C
Sbjct: 50 LDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVLLPFPAAAFRQDVHSAAYRCV 109
Query: 204 AENAFG 187
A N+ G
Sbjct: 110 ASNSVG 115
Score = 25.8 bits (54), Expect = 0.46
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = -3
Query: 742 LPXYAHTPGTTIELTCEAAGXPAPSVHW 659
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 709 IELTCEAAGXPAPSVHWFK 653
+ L C+A G P P++ W K
Sbjct: 723 VALHCQAQGVPTPTIVWKK 741
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 48.0 bits (109), Expect = 1e-07
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = -1
Query: 369 VVLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAF 190
V LPC G P P++TW + ++ + R++ L G L I + +D EY+C EN F
Sbjct: 1294 VKLPCLAVGVPAPEVTW-KVRGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTF 1352
Query: 189 GSE 181
G +
Sbjct: 1353 GHD 1355
Score = 31.9 bits (69), Expect = 0.007
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = -1
Query: 357 CRVKGHPKPKITWFN------GQNVPIE-KNPRMKVLRSGELVISSLLWSDMDEYTCQAE 199
C+ G PKP++TW G ++ NP + V G L I+++ ++ Y C+A
Sbjct: 700 CKADGFPKPQVTWKKAAGDTPGDYTDLKLSNPDISV-EDGTLSINNIQKTNEGYYLCEAV 758
Query: 198 NAFGS 184
N G+
Sbjct: 759 NGIGA 763
Score = 31.1 bits (67), Expect = 0.012
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Frame = -1
Query: 366 VLPCRVKGHPKPKITWFNGQNVPIEKNPRMK-VLRSGELVISSLLWSDMDE------YTC 208
V+ C+ +G+P+P I W + P ++ VL +G LV D + Y+C
Sbjct: 22 VVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYSC 81
Query: 207 QAENAFGS 184
A + GS
Sbjct: 82 LARSPAGS 89
Score = 28.3 bits (60), Expect = 0.087
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Frame = -1
Query: 366 VLPCRVKGHPKPKITW-FNGQNVPIEKNPRM----KVLRSG---ELVISSLLWSDMDEYT 211
VL C +G I W N + + + + R ++L +G +L I SD +T
Sbjct: 795 VLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEILANGVLSDLSIKRTERSDSALFT 854
Query: 210 CQAENAFGSE 181
C A NAFGS+
Sbjct: 855 CVATNAFGSD 864
Score = 27.1 bits (57), Expect = 0.20
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 721 PGTTIELTCEAAGXPAPSVHW 659
PG ++ L C A+G P P + W
Sbjct: 407 PGPSMFLKCVASGNPTPEITW 427
Score = 26.6 bits (56), Expect = 0.26
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -3
Query: 718 GTTIELTCEAAGXPAPSVHWFKNDSPVYEYDVESNELIGSSPTSIARISSTLIVTRTTSQ 539
G T+ +TC AG P S+ W + D+ V + + + + T I V R + Q
Sbjct: 505 GETLRVTCPVAGYPIESIVW-ERDTRV--LPINRKQKVFPNGTLIIE-----NVERMSDQ 556
Query: 538 DVYTCL 521
YTC+
Sbjct: 557 ATYTCV 562
Score = 26.2 bits (55), Expect = 0.35
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = -1
Query: 363 LPCRVKGHPKPKITW-FNGQNVPIEKNPRM--KVLRSGELV----ISSLLWSDMDEYTCQ 205
L C G+P P+ITW +G+ + + ++ V +G++V ISS +D Y C
Sbjct: 413 LKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCI 472
Query: 204 AENAFGS 184
A + GS
Sbjct: 473 AASKVGS 479
Score = 25.8 bits (54), Expect = 0.46
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 718 GTTIELTCEAAGXPAPSVHWFKND 647
GT + C+A G P P + W + D
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRAD 41
Score = 25.4 bits (53), Expect = 0.61
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -3
Query: 718 GTTIELTCEAAGXPAPSVHWFKNDSPV 638
G TC G P +V W K+ P+
Sbjct: 322 GRPATFTCNVRGNPIKTVSWLKDGKPL 348
Score = 25.4 bits (53), Expect = 0.61
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -3
Query: 730 AHTPGTTIELTCEAAGXPAPSVHWFK--NDSP 641
A G+ + C+A G P P V W K D+P
Sbjct: 689 AFAQGSDARVECKADGFPKPQVTWKKAAGDTP 720
Score = 25.4 bits (53), Expect = 0.61
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 709 IELTCEAAGXPAPSVHW 659
++L C A G PAP V W
Sbjct: 1294 VKLPCLAVGVPAPEVTW 1310
Score = 25.0 bits (52), Expect = 0.81
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -3
Query: 709 IELTCEAAGXPAPSVHWFK-NDSPVYEYDVESNELIGSSPTSIARISSTLIVTRTTSQD- 536
+ L C A G P P W+K + V+ NE + ++S TLI+ +D
Sbjct: 230 LPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNE-------RVRQVSGTLIIREARVEDS 282
Query: 535 -VYTCL 521
Y C+
Sbjct: 283 GKYLCI 288
Score = 25.0 bits (52), Expect = 0.81
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 267 RSGELVISSLLWSDMDEYTCQAENAFGSEKAKT 169
R L+IS + EY C AENA G+ T
Sbjct: 639 RVSMLMISVITARHAGEYVCTAENAAGTASHST 671
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 36.3 bits (80), Expect = 3e-04
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 375 NRVVLPCRVKGHPKPKITWF-NGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQA 202
+ V + C V G P P + W NG ++ P ++V G L ++ + YTC A
Sbjct: 326 DNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHA 384
Score = 34.3 bits (75), Expect = 0.001
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -1
Query: 357 CRVKGHPKPKITWF-NGQNVPIEKNPRMKVLRSG-ELVISSLLWSDMDEYTCQAENAFG 187
C V G P P++ W N + + ++ + ++ +G +L+I ++ ++D Y CQA + G
Sbjct: 423 CHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIKNVDYADTGAYMCQASSIGG 481
Score = 33.9 bits (74), Expect = 0.002
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 703 LTCEAAGXPAPSVHWFKNDSPVYEYDVESNELIGSSPTSIAR 578
+ C AG P P V W KND + + +LIG+ I +
Sbjct: 421 IRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIK 462
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 27.5 bits (58), Expect = 0.15
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 718 GTTIELTCEAAGXPAPSVHWFKNDSPVYEY 629
G I C A G P P + W K+ +Y +
Sbjct: 37 GRKITFFCMATGFPRPEITWLKDGIELYHH 66
Score = 27.5 bits (58), Expect = 0.15
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Frame = -1
Query: 372 RVVLPCRVKGHPKPKITW-------FNGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEY 214
++ C G P+P+ITW ++ + + + P ++ I D Y
Sbjct: 39 KITFFCMATGFPRPEITWLKDGIELYHHKFFQVHEWPVGNDTLKSKMEIDPATQKDAGYY 98
Query: 213 TCQAENAFGSEK 178
CQA+N + ++
Sbjct: 99 ECQADNQYAVDR 110
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,188
Number of Sequences: 438
Number of extensions: 4268
Number of successful extensions: 45
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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