Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_B02
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 185 3e-47
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 185 3e-47
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 185 3e-47
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 185 3e-47
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 185 3e-47
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 185 3e-47
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 185 3e-47
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 185 3e-47
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 31 0.70
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc... 29 2.8
Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical pr... 29 4.9
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 185 bits (451), Expect = 3e-47
Identities = 82/116 (70%), Positives = 98/116 (84%)
Frame = -3
Query: 628 RAKGYKGVTSRWHTKKLPRKTHQGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 449
R G+KGVTSRWHTKKLPRKTH+GLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 448 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 281
IYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 284 IYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 297 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 118
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 117 KDRIRE 100
+D + E
Sbjct: 391 RDFLAE 396
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -2
Query: 746 ISGGTIEDKVKWPREHXENLSLSILCXPQDEMIDCIGVTKG 624
++GGTIE KV W REH E QDEMID IGVT+G
Sbjct: 185 VNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 185 bits (451), Expect = 3e-47
Identities = 82/116 (70%), Positives = 98/116 (84%)
Frame = -3
Query: 628 RAKGYKGVTSRWHTKKLPRKTHQGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 449
R G+KGVTSRWHTKKLPRKTH+GLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 448 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 281
IYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 284 IYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 297 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 118
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 117 KDRIRE 100
+D + E
Sbjct: 391 RDFLAE 396
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -2
Query: 746 ISGGTIEDKVKWPREHXENLSLSILCXPQDEMIDCIGVTKG 624
++GGTIE KV W REH E QDEMID IGVT+G
Sbjct: 185 VNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 185 bits (451), Expect = 3e-47
Identities = 82/116 (70%), Positives = 98/116 (84%)
Frame = -3
Query: 628 RAKGYKGVTSRWHTKKLPRKTHQGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 449
R G+KGVTSRWHTKKLPRKTH+GLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 126 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 185
Query: 448 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 281
IYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 186 IYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 297 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 118
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 117 KDRIRE 100
+D + E
Sbjct: 293 RDFLAE 298
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -2
Query: 746 ISGGTIEDKVKWPREHXENLSLSILCXPQDEMIDCIGVTKG 624
++GGTIE KV W REH E QDEMID IGVT+G
Sbjct: 87 VNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 127
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 185 bits (451), Expect = 3e-47
Identities = 82/116 (70%), Positives = 98/116 (84%)
Frame = -3
Query: 628 RAKGYKGVTSRWHTKKLPRKTHQGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 449
R G+KGVTSRWHTKKLPRKTH+GLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 448 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 281
IYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 236 IYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 297 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 118
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 117 KDRIRE 100
+D + E
Sbjct: 343 RDFLAE 348
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 185 bits (451), Expect = 3e-47
Identities = 82/116 (70%), Positives = 98/116 (84%)
Frame = -3
Query: 628 RAKGYKGVTSRWHTKKLPRKTHQGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 449
R G+KGVTSRWHTKKLPRKTH+GLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 448 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 281
IYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 284 IYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 297 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 118
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 117 KDRIRE 100
+D + E
Sbjct: 391 RDFLAE 396
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -2
Query: 746 ISGGTIEDKVKWPREHXENLSLSILCXPQDEMIDCIGVTKG 624
++GGTIE KV W REH E QDEMID IGVT+G
Sbjct: 185 VNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 185 bits (451), Expect = 3e-47
Identities = 82/116 (70%), Positives = 98/116 (84%)
Frame = -3
Query: 628 RAKGYKGVTSRWHTKKLPRKTHQGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 449
R G+KGVTSRWHTKKLPRKTH+GLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 126 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 185
Query: 448 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 281
IYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 186 IYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 297 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 118
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 117 KDRIRE 100
+D + E
Sbjct: 293 RDFLAE 298
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -2
Query: 746 ISGGTIEDKVKWPREHXENLSLSILCXPQDEMIDCIGVTKG 624
++GGTIE KV W REH E QDEMID IGVT+G
Sbjct: 87 VNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 127
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 185 bits (451), Expect = 3e-47
Identities = 82/116 (70%), Positives = 98/116 (84%)
Frame = -3
Query: 628 RAKGYKGVTSRWHTKKLPRKTHQGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 449
R G+KGVTSRWHTKKLPRKTH+GLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 448 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 281
IYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 236 IYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 297 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 118
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 117 KDRIRE 100
+D + E
Sbjct: 343 RDFLAE 348
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 185 bits (451), Expect = 3e-47
Identities = 82/116 (70%), Positives = 98/116 (84%)
Frame = -3
Query: 628 RAKGYKGVTSRWHTKKLPRKTHQGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 449
R G+KGVTSRWHTKKLPRKTH+GLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 448 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 281
IYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 284 IYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 297 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 118
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 117 KDRIRE 100
+D + E
Sbjct: 391 RDFLAE 396
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -2
Query: 746 ISGGTIEDKVKWPREHXENLSLSILCXPQDEMIDCIGVTKG 624
++GGTIE KV W REH E QDEMID IGVT+G
Sbjct: 185 VNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 619 GYKGVTSRWHTKKLP-RKTHQGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIY 443
G++G RW + P R+T + R++ +G+ +R+ G GY RT +I
Sbjct: 234 GFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIV 293
Query: 442 RI 437
RI
Sbjct: 294 RI 295
>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyclase
protein 21 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 212 FSSAALFVCTRRDFLRVMIRFLGPMQQPLXHHKVVVYFTIM 334
FS LF+ + FL+++IR+L + P+ +H VV T M
Sbjct: 1049 FSLNKLFIV--KSFLKLLIRYLQMRRHPISNHNVVTVKTCM 1087
>Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical
protein C05B5.6 protein.
Length = 408
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 160 ESTMTELGRGV-NEF--EVDLF*CSPLCMHTQRLSKSNDTLFRSHAATLXSSQSRCLLHH 330
++T LG G+ +EF +D F C +RLSK++ LFR + + C H
Sbjct: 288 QATSLSLGSGMFSEFFKHIDHFKSLKFCFFGKRLSKNHIELFRDNVIAKSVNLESCTFEH 347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,804,916
Number of Sequences: 27780
Number of extensions: 388320
Number of successful extensions: 977
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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