Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_A18
         (811 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   2.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   4.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   7.7  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   7.7  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 646 QDTQHHRLSDPGEIFL*EFQAFDD 575
           +DTQ  RLS+ G I   +F   DD
Sbjct: 244 EDTQERRLSNKGSISKLQFHNKDD 267


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 645 CDENMEDLDDY 677
           CDE +ED DDY
Sbjct: 520 CDEFVEDSDDY 530


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = -2

Query: 309 AGQ-LPALSWCLEPSQLNHSAPQR 241
           AG+ LP + W      LNH  P +
Sbjct: 426 AGEPLPRVQWLKNDEALNHDQPDK 449


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 720 SVSIRTLEVQGTTWCNRQD 664
           S+S+ T+E+ GTT  NR D
Sbjct: 130 SLSLITMELCGTTLQNRLD 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,696
Number of Sequences: 438
Number of extensions: 3755
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)