Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P23
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synapti... 66 2e-11
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti... 66 2e-11
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti... 66 2e-11
AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform... 66 2e-11
AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform... 66 2e-11
AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein. 66 2e-11
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo... 66 2e-11
U80438-1|AAB37631.1| 400|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL033514-36|CAH19095.1| 222|Caenorhabditis elegans Hypothetical... 30 2.4
AF098995-3|AAC67483.1| 276|Caenorhabditis elegans F-box b prote... 29 3.1
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z82271-5|CAI46599.1| 378|Caenorhabditis elegans Hypothetical pr... 29 4.1
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 29 4.1
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z94800-1|CAB08161.2| 491|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z82288-9|CAB05328.2| 491|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z73104-9|CAA97438.2| 491|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 9.5
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform d protein.
Length = 1058
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 376 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 555
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 65 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 122
Query: 556 LDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRILIGYNRGLAVLWD 732
L L++F +S VI + + +C +V+PG V + P T++LI Y++G+ V W+
Sbjct: 123 LCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKLLIVYDKGIVVQWN 178
>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform c protein.
Length = 1211
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 376 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 555
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 65 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 122
Query: 556 LDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRILIGYNRGLAVLWD 732
L L++F +S VI + + +C +V+PG V + P T++LI Y++G+ V W+
Sbjct: 123 LCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKLLIVYDKGIVVQWN 178
>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform a protein.
Length = 1124
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 376 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 555
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 100 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 157
Query: 556 LDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRILIGYNRGLAVLWD 732
L L++F +S VI + + +C +V+PG V + P T++LI Y++G+ V W+
Sbjct: 158 LCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKLLIVYDKGIVVQWN 213
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 156 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 335
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 336 ESIV 347
E ++
Sbjct: 88 EPVL 91
>AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform E
protein.
Length = 1133
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 376 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 555
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 100 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 157
Query: 556 LDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRILIGYNRGLAVLWD 732
L L++F +S VI + + +C +V+PG V + P T++LI Y++G+ V W+
Sbjct: 158 LCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKLLIVYDKGIVVQWN 213
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 156 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 335
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 336 ESIV 347
E ++
Sbjct: 88 EPVL 91
>AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform D
protein.
Length = 1128
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 376 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 555
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 100 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 157
Query: 556 LDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRILIGYNRGLAVLWD 732
L L++F +S VI + + +C +V+PG V + P T++LI Y++G+ V W+
Sbjct: 158 LCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKLLIVYDKGIVVQWN 213
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 156 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 335
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 336 ESIV 347
E ++
Sbjct: 88 EPVL 91
>AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.
Length = 1058
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 376 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 555
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 65 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 122
Query: 556 LDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRILIGYNRGLAVLWD 732
L L++F +S VI + + +C +V+PG V + P T++LI Y++G+ V W+
Sbjct: 123 LCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKLLIVYDKGIVVQWN 178
>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
A protein.
Length = 1124
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 376 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 555
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 100 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 157
Query: 556 LDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRILIGYNRGLAVLWD 732
L L++F +S VI + + +C +V+PG V + P T++LI Y++G+ V W+
Sbjct: 158 LCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKLLIVYDKGIVVQWN 213
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 156 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 335
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 336 ESIV 347
E ++
Sbjct: 88 EPVL 91
>U80438-1|AAB37631.1| 400|Caenorhabditis elegans Hypothetical
protein T19B4.5 protein.
Length = 400
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +1
Query: 142 PLLRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPPE---HSRYTADQASN 312
P LRG ++ + RQS+ A + +Q S+ IR R + P P+ H+ + N
Sbjct: 48 PQLRGNPMHHHH-YDNRQSAPAYQVPQQQSQSIRRGVGRPMAPRPQSYPHNMDMVQKLQN 106
Query: 313 STANTPITNR*SHRYISSQGTGRLIS 390
P R R IS G R++S
Sbjct: 107 KNVYMPAQQRPQTR-ISPAG-ARIVS 130
>AL033514-36|CAH19095.1| 222|Caenorhabditis elegans Hypothetical
protein Y75B8A.39 protein.
Length = 222
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +1
Query: 472 KNKKISAICVESSAKNALLGTEGGNIYSLDLSAFTISEDVIYQDVVMQNCPED------- 630
KNK SA+C++ +N E + L+++ + + + +C ED
Sbjct: 24 KNKLHSAVCLKKKKQNLTDNQELCDKLQLEINILQSQIHEKEKTLCLGSCQEDLFNFLQY 83
Query: 631 YKVNPGAVESVYEHPKTPTRILIGYNRGLA 720
Y N A+E + EH K+ + LI + LA
Sbjct: 84 YNNNKQAIEKMVEHGKSQDQNLIKRQKALA 113
>AF098995-3|AAC67483.1| 276|Caenorhabditis elegans F-box b protein
protein 17 protein.
Length = 276
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 382 LISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTE 537
L + C + +H +++++L H G N + +ICV S + G E
Sbjct: 204 LTTNCTNLEIHYQSLSDRNLNLFMKHWIRGSNPNLQSICVNFSREMRSFGAE 255
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical protein
T01G1.1c protein.
Length = 1580
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 367 QGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 540
+G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1514 KGKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1568
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical protein
T01G1.1a protein.
Length = 1605
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 367 QGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 540
+G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1539 KGKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1593
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical protein
T01G1.1c protein.
Length = 1580
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 367 QGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 540
+G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1514 KGKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1568
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical protein
T01G1.1a protein.
Length = 1605
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 367 QGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 540
+G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1539 KGKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1593
>Z82271-5|CAI46599.1| 378|Caenorhabditis elegans Hypothetical
protein T01G1.1b protein.
Length = 378
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 367 QGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 540
+G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 312 KGKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 366
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 367 QGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 540
+G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1543 KGKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1597
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 169 MNYLHSERQSSM-ASRTERQHSRGIRSSDSRRLVPPPEHSRYTADQ 303
MN+ H + M A T++QH ++VPPP H Q
Sbjct: 448 MNHPHQQNHPHMNAQMTQQQHPGQYLPQQYMQMVPPPHHQMQQMQQ 493
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 169 MNYLHSERQSSM-ASRTERQHSRGIRSSDSRRLVPPPEHSRYTADQ 303
MN+ H + M A T++QH ++VPPP H Q
Sbjct: 445 MNHPHQQNHPHMNAQMTQQQHPGQYLPQQYMQMVPPPHHQMQQMQQ 490
>Z94800-1|CAB08161.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 656 SLYTNTLRLL---HVF*SDTTEDWPCSGTEXLRLPTHTFVSNXQLESLCWNDDGEP 814
SLY N L +L VF S + + C+G++ + PT+ +SN + W + G P
Sbjct: 2 SLYINLLTILTLCSVFSSLIADPYNCAGSQIINPPTN--ISNPWVYPSTWINKGNP 55
>Z82288-9|CAB05328.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 656 SLYTNTLRLL---HVF*SDTTEDWPCSGTEXLRLPTHTFVSNXQLESLCWNDDGEP 814
SLY N L +L VF S + + C+G++ + PT+ +SN + W + G P
Sbjct: 2 SLYINLLTILTLCSVFSSLIADPYNCAGSQIINPPTN--ISNPWVYPSTWINKGNP 55
>Z73104-9|CAA97438.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 656 SLYTNTLRLL---HVF*SDTTEDWPCSGTEXLRLPTHTFVSNXQLESLCWNDDGEP 814
SLY N L +L VF S + + C+G++ + PT+ +SN + W + G P
Sbjct: 2 SLYINLLTILTLCSVFSSLIADPYNCAGSQIINPPTN--ISNPWVYPSTWINKGNP 55
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 478 KKISAICVESSAKNALLGTEGGNIY 552
K++ CV S++K+ LGT G++Y
Sbjct: 44 KRVKYTCVASTSKSLCLGTSTGSVY 68
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 190 RQSSMASRTERQHSRGIRSSDSRRLVPPPEHSRYTADQASNSTANTP 330
RQS R+ R+ SS SR PPP R ++Q + +P
Sbjct: 491 RQSPQRRRSPRRRRSPSSSSRSRSPPPPPRRPRQDSEQQAPVAVKSP 537
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +1
Query: 133 ASSPLLRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPPEHSRYTADQASN 312
AS RGR+ + S AS R SRG R +++ RL + T+ + S
Sbjct: 61 ASKSATRGRTASKTPKTPSKTPSSASARSRSRSRG-RPTNASRLSASTPSASSTSVKRSR 119
Query: 313 STANTP 330
S TP
Sbjct: 120 SVTKTP 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,702,698
Number of Sequences: 27780
Number of extensions: 431293
Number of successful extensions: 1377
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1363
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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