Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P20
(850 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC106053-1|AAI06054.1| 841|Homo sapiens MAP7 domain containing ... 37 0.080
BC067256-1|AAH67256.1| 678|Homo sapiens MAP7D1 protein protein. 37 0.080
AF218002-1|AAG17244.1| 554|Homo sapiens unknown protein. 37 0.080
AB033013-1|BAA86501.2| 813|Homo sapiens KIAA1187 protein protein. 37 0.080
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 34 0.75
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 34 0.75
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 34 0.75
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 34 0.75
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 34 0.75
AY188338-1|AAO12060.1| 903|Homo sapiens ataxin-2-like protein p... 33 0.99
AY188337-1|AAO12059.1| 903|Homo sapiens ataxin-2-like protein p... 33 0.99
AY188336-1|AAO12058.1| 903|Homo sapiens ataxin-2-like protein p... 33 0.99
AY188335-1|AAO12057.1| 883|Homo sapiens ataxin-2-like protein p... 33 0.99
AY188334-1|AAO12056.1| 883|Homo sapiens ataxin-2-like protein p... 33 0.99
AF034373-1|AAC69607.1| 1051|Homo sapiens ataxin-2-like protein A... 33 0.99
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 33 1.3
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 33 1.7
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr... 32 2.3
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c... 32 2.3
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c... 32 2.3
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c... 32 2.3
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c... 32 2.3
AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein. 32 2.3
BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein. 31 4.0
BC023545-1|AAH23545.1| 323|Homo sapiens solute carrier family 2... 31 4.0
BC019033-1|AAH19033.1| 323|Homo sapiens solute carrier family 2... 31 4.0
AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence si... 31 4.0
AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence si... 31 4.0
AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein pr... 31 4.0
AK023106-1|BAB14407.1| 323|Homo sapiens protein ( Homo sapiens ... 31 4.0
AJ428202-1|CAD21007.1| 323|Homo sapiens glutamate carrier protein. 31 4.0
BC127948-1|AAI27949.1| 353|Homo sapiens Unknown (protein for MG... 31 5.3
BC127947-1|AAI27948.1| 271|Homo sapiens Unknown (protein for MG... 31 5.3
AK123755-1|BAC85688.1| 258|Homo sapiens rCS1a) mRNA. protein. 31 5.3
AJ537424-1|CAD60934.1| 455|Homo sapiens growth/differentiation ... 31 5.3
AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy ch... 31 5.3
X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting pr... 31 7.0
BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein pr... 31 7.0
BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein. 31 7.0
BC041329-1|AAH41329.1| 268|Homo sapiens ELL associated factor 1... 31 7.0
BC009743-1|AAH09743.1| 531|Homo sapiens coiled-coil domain cont... 31 7.0
BC002787-1|AAH02787.1| 531|Homo sapiens coiled-coil domain cont... 31 7.0
AY545071-1|AAS48631.1| 888|Homo sapiens breast cancer anti-estr... 31 7.0
AK095939-1|BAC04654.1| 377|Homo sapiens protein ( Homo sapiens ... 31 7.0
AF272973-1|AAK58687.1| 268|Homo sapiens EAF1 protein. 31 7.0
AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrom... 31 7.0
AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protei... 31 7.0
AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein. 31 7.0
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 30 9.2
AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive dom... 30 9.2
AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive dom... 30 9.2
AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic co... 30 9.2
AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic co... 30 9.2
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 30 9.2
AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive dom... 30 9.2
AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive dom... 30 9.2
AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coi... 30 9.2
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 30 9.2
AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein pr... 30 9.2
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 30 9.2
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 30 9.2
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 30 9.2
AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein pro... 30 9.2
AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein. 30 9.2
AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein. 30 9.2
>BC106053-1|AAI06054.1| 841|Homo sapiens MAP7 domain containing 1
protein.
Length = 841
Score = 37.1 bits (82), Expect = 0.080
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 244 SGSGASTLTPRKAQRCSSKGVALRTPR*ASPS-RLGASIPPPPPFAQSRCSTSPYRGPRR 420
S S AS L+P+ R SS + P PS G ++PP PP + ++ R R+
Sbjct: 452 SASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRK 511
Query: 421 SNI*ASPSTVG*HSAPTSRRYA 486
SPS G S+R A
Sbjct: 512 EEAKESPSAAGPEDKSQSKRRA 533
>BC067256-1|AAH67256.1| 678|Homo sapiens MAP7D1 protein protein.
Length = 678
Score = 37.1 bits (82), Expect = 0.080
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 244 SGSGASTLTPRKAQRCSSKGVALRTPR*ASPS-RLGASIPPPPPFAQSRCSTSPYRGPRR 420
S S AS L+P+ R SS + P PS G ++PP PP + ++ R R+
Sbjct: 290 SASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRK 349
Query: 421 SNI*ASPSTVG*HSAPTSRRYA 486
SPS G S+R A
Sbjct: 350 EEAKESPSAAGPEDKSQSKRRA 371
>AF218002-1|AAG17244.1| 554|Homo sapiens unknown protein.
Length = 554
Score = 37.1 bits (82), Expect = 0.080
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 244 SGSGASTLTPRKAQRCSSKGVALRTPR*ASPS-RLGASIPPPPPFAQSRCSTSPYRGPRR 420
S S AS L+P+ R SS + P PS G ++PP PP + ++ R R+
Sbjct: 120 SASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRK 179
Query: 421 SNI*ASPSTVG*HSAPTSRRYA 486
SPS G S+R A
Sbjct: 180 EEAKESPSAAGPEDKSQSKRRA 201
>AB033013-1|BAA86501.2| 813|Homo sapiens KIAA1187 protein protein.
Length = 813
Score = 37.1 bits (82), Expect = 0.080
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 244 SGSGASTLTPRKAQRCSSKGVALRTPR*ASPS-RLGASIPPPPPFAQSRCSTSPYRGPRR 420
S S AS L+P+ R SS + P PS G ++PP PP + ++ R R+
Sbjct: 425 SASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRK 484
Query: 421 SNI*ASPSTVG*HSAPTSRRYA 486
SPS G S+R A
Sbjct: 485 EEAKESPSAAGPEDKSQSKRRA 506
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.9 bits (74), Expect = 0.75
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +1
Query: 244 SGSGASTLTPRKAQR-CSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSP--YRGP 414
S S +++ +PRK Q+ S +G R+P P+R S P PP + R T P R P
Sbjct: 524 SPSRSASPSPRKRQKETSPRGRRRRSPS-PPPTRRRRSPSPAPPPRRRRTPTPPPRRRTP 582
Query: 415 RRSNI*ASPSTVG*HSAPTSRRYAIVPP 498
SPS +S P RRY+ PP
Sbjct: 583 SPPPRRRSPSPRR-YSPPIQRRYSPSPP 609
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.9 bits (74), Expect = 0.75
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +1
Query: 244 SGSGASTLTPRKAQR-CSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSP--YRGP 414
S S +++ +PRK Q+ S +G R+P P+R S P PP + R T P R P
Sbjct: 524 SPSRSASPSPRKRQKETSPRGRRRRSPS-PPPTRRRRSPSPAPPPRRRRTPTPPPRRRTP 582
Query: 415 RRSNI*ASPSTVG*HSAPTSRRYAIVPP 498
SPS +S P RRY+ PP
Sbjct: 583 SPPPRRRSPSPRR-YSPPIQRRYSPSPP 609
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.9 bits (74), Expect = 0.75
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +1
Query: 244 SGSGASTLTPRKAQR-CSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSP--YRGP 414
S S +++ +PRK Q+ S +G R+P P+R S P PP + R T P R P
Sbjct: 524 SPSRSASPSPRKRQKETSPRGRRRRSPS-PPPTRRRRSPSPAPPPRRRRTPTPPPRRRTP 582
Query: 415 RRSNI*ASPSTVG*HSAPTSRRYAIVPP 498
SPS +S P RRY+ PP
Sbjct: 583 SPPPRRRSPSPRR-YSPPIQRRYSPSPP 609
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.9 bits (74), Expect = 0.75
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +1
Query: 244 SGSGASTLTPRKAQR-CSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSP--YRGP 414
S S +++ +PRK Q+ S +G R+P P+R S P PP + R T P R P
Sbjct: 522 SPSRSASPSPRKRQKETSPRGRRRRSPS-PPPTRRRRSPSPAPPPRRRRTPTPPPRRRTP 580
Query: 415 RRSNI*ASPSTVG*HSAPTSRRYAIVPP 498
SPS +S P RRY+ PP
Sbjct: 581 SPPPRRRSPSPRR-YSPPIQRRYSPSPP 607
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.9 bits (74), Expect = 0.75
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +1
Query: 244 SGSGASTLTPRKAQR-CSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSP--YRGP 414
S S +++ +PRK Q+ S +G R+P P+R S P PP + R T P R P
Sbjct: 522 SPSRSASPSPRKRQKETSPRGRRRRSPS-PPPTRRRRSPSPAPPPRRRRTPTPPPRRRTP 580
Query: 415 RRSNI*ASPSTVG*HSAPTSRRYAIVPP 498
SPS +S P RRY+ PP
Sbjct: 581 SPPPRRRSPSPRR-YSPPIQRRYSPSPP 607
>AY188338-1|AAO12060.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 33.5 bits (73), Expect = 0.99
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +1
Query: 289 CSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAP 468
CS V+ R+P+ A+P+ + AS P PP S TS P S++ S VG +P
Sbjct: 523 CSGPDVSPRSPKSAAPAPISASCPEPP--IGSAVPTSSASIPVTSSV--SDPGVG-SISP 577
Query: 469 TSRRYAIVPPSF*DVSTR 522
S + ++ P ++ST+
Sbjct: 578 ASPKISLAPTDVKELSTK 595
>AY188337-1|AAO12059.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 33.5 bits (73), Expect = 0.99
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +1
Query: 289 CSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAP 468
CS V+ R+P+ A+P+ + AS P PP S TS P S++ S VG +P
Sbjct: 523 CSGPDVSPRSPKSAAPAPISASCPEPP--IGSAVPTSSASIPVTSSV--SDPGVG-SISP 577
Query: 469 TSRRYAIVPPSF*DVSTR 522
S + ++ P ++ST+
Sbjct: 578 ASPKISLAPTDVKELSTK 595
>AY188336-1|AAO12058.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 33.5 bits (73), Expect = 0.99
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +1
Query: 289 CSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAP 468
CS V+ R+P+ A+P+ + AS P PP S TS P S++ S VG +P
Sbjct: 523 CSGPDVSPRSPKSAAPAPISASCPEPP--IGSAVPTSSASIPVTSSV--SDPGVG-SISP 577
Query: 469 TSRRYAIVPPSF*DVSTR 522
S + ++ P ++ST+
Sbjct: 578 ASPKISLAPTDVKELSTK 595
>AY188335-1|AAO12057.1| 883|Homo sapiens ataxin-2-like protein
protein.
Length = 883
Score = 33.5 bits (73), Expect = 0.99
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +1
Query: 289 CSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAP 468
CS V+ R+P+ A+P+ + AS P PP S TS P S++ S VG +P
Sbjct: 523 CSGPDVSPRSPKSAAPAPISASCPEPP--IGSAVPTSSASIPVTSSV--SDPGVG-SISP 577
Query: 469 TSRRYAIVPPSF*DVSTR 522
S + ++ P ++ST+
Sbjct: 578 ASPKISLAPTDVKELSTK 595
>AY188334-1|AAO12056.1| 883|Homo sapiens ataxin-2-like protein
protein.
Length = 883
Score = 33.5 bits (73), Expect = 0.99
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +1
Query: 289 CSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAP 468
CS V+ R+P+ A+P+ + AS P PP S TS P S++ S VG +P
Sbjct: 523 CSGPDVSPRSPKSAAPAPISASCPEPP--IGSAVPTSSASIPVTSSV--SDPGVG-SISP 577
Query: 469 TSRRYAIVPPSF*DVSTR 522
S + ++ P ++ST+
Sbjct: 578 ASPKISLAPTDVKELSTK 595
>AF034373-1|AAC69607.1| 1051|Homo sapiens ataxin-2-like protein A2LP
protein.
Length = 1051
Score = 33.5 bits (73), Expect = 0.99
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +1
Query: 289 CSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAP 468
CS V+ R+P+ A+P+ + AS P PP S TS P S++ S VG +P
Sbjct: 523 CSGPDVSPRSPKSAAPAPISASCPEPP--IGSAVPTSSASIPVTSSV--SDPGVG-SISP 577
Query: 469 TSRRYAIVPPSF*DVSTR 522
S + ++ P ++ST+
Sbjct: 578 ASPKISLAPTDVKELSTK 595
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 241 GSGSGASTLTPRKAQRCSSKGVALRTPR*AS---PSRLGASIPPPPPFAQSRCSTSPYRG 411
G G G + +PR+ R S+G + R S SR G S P+++SR S SPY
Sbjct: 111 GGGYGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYGRSPYSRSPYSRSRYSRSPYSR 170
Query: 412 PR 417
R
Sbjct: 171 SR 172
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 32.7 bits (71), Expect = 1.7
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +1
Query: 217 PRLPPWDSGSGSGASTLTPRKAQRCSSKGVAL-RTPR*ASPSRLGASIPPP--PPFAQSR 387
PR P + + PR + R + +L R P A P+R+ + PP PP A S
Sbjct: 41 PRASPTRTPPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPPTA-SP 99
Query: 388 CSTSPYRGPRRSNI*ASPSTVG*HSAPT 471
T P P R+ ASP+ ++PT
Sbjct: 100 ARTPPTESPARTPPTASPARTPPRASPT 127
>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
protein.
Length = 1564
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 154 PMTPPSTTR------VGRRRCFIDDFRPRLPPWDSGSGSGASTLTPRKAQRCSSKGVALR 315
P TPP TT+ + ++D + + D+ + P + + ++ A
Sbjct: 1031 PRTPPITTKEELVEMCNGKNGILEDSQKKE---DTAFSDWSDEDVPDRTEVTEAEHTATA 1087
Query: 316 TPR*ASPSRLGASIPPPPPFAQSRCSTSP 402
T ++PS L + +PPPPP A + +T P
Sbjct: 1088 TTPGSTPSPLSSLLPPPPPVATATATTVP 1116
>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 154 PMTPPSTTR------VGRRRCFIDDFRPRLPPWDSGSGSGASTLTPRKAQRCSSKGVALR 315
P TPP TT+ + ++D + + D+ + P + + ++ A
Sbjct: 1031 PRTPPITTKEELVEMCNGKNGILEDSQKKE---DTAFSDWSDEDVPDRTEVTEAEHTATA 1087
Query: 316 TPR*ASPSRLGASIPPPPPFAQSRCSTSP 402
T ++PS L + +PPPPP A + +T P
Sbjct: 1088 TTPGSTPSPLSSLLPPPPPVATATATTVP 1116
>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 154 PMTPPSTTR------VGRRRCFIDDFRPRLPPWDSGSGSGASTLTPRKAQRCSSKGVALR 315
P TPP TT+ + ++D + + D+ + P + + ++ A
Sbjct: 1031 PRTPPITTKEELVEMCNGKNGILEDSQKKE---DTAFSDWSDEDVPDRTEVTEAEHTATA 1087
Query: 316 TPR*ASPSRLGASIPPPPPFAQSRCSTSP 402
T ++PS L + +PPPPP A + +T P
Sbjct: 1088 TTPGSTPSPLSSLLPPPPPVATATATTVP 1116
>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 154 PMTPPSTTR------VGRRRCFIDDFRPRLPPWDSGSGSGASTLTPRKAQRCSSKGVALR 315
P TPP TT+ + ++D + + D+ + P + + ++ A
Sbjct: 1031 PRTPPITTKEELVEMCNGKNGILEDSQKKE---DTAFSDWSDEDVPDRTEVTEAEHTATA 1087
Query: 316 TPR*ASPSRLGASIPPPPPFAQSRCSTSP 402
T ++PS L + +PPPPP A + +T P
Sbjct: 1088 TTPGSTPSPLSSLLPPPPPVATATATTVP 1116
>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 154 PMTPPSTTR------VGRRRCFIDDFRPRLPPWDSGSGSGASTLTPRKAQRCSSKGVALR 315
P TPP TT+ + ++D + + D+ + P + + ++ A
Sbjct: 1031 PRTPPITTKEELVEMCNGKNGILEDSQKKE---DTAFSDWSDEDVPDRTEVTEAEHTATA 1087
Query: 316 TPR*ASPSRLGASIPPPPPFAQSRCSTSP 402
T ++PS L + +PPPPP A + +T P
Sbjct: 1088 TTPGSTPSPLSSLLPPPPPVATATATTVP 1116
>AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein.
Length = 967
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 154 PMTPPSTTR------VGRRRCFIDDFRPRLPPWDSGSGSGASTLTPRKAQRCSSKGVALR 315
P TPP TT+ + ++D + + D+ + P + + ++ A
Sbjct: 330 PRTPPITTKEELVEMCNGKNGILEDSQKKE---DTAFSDWSDEDVPDRTEVTEAEHTATA 386
Query: 316 TPR*ASPSRLGASIPPPPPFAQSRCSTSP 402
T ++PS L + +PPPPP A + +T P
Sbjct: 387 TTPGSTPSPLSSLLPPPPPVATATATTVP 415
>BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein.
Length = 755
Score = 31.5 bits (68), Expect = 4.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 246 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPAV---RPITMFDQPIPWAP 416
R WR+ +P S+ +L GR P L P +R +P+P + +F P P A
Sbjct: 650 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 708
Query: 417 KVKYLG 434
K + G
Sbjct: 709 KTPHPG 714
>BC023545-1|AAH23545.1| 323|Homo sapiens solute carrier family 25
(mitochondrial carrier: glutamate), member 22 protein.
Length = 323
Score = 31.5 bits (68), Expect = 4.0
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = -3
Query: 200 KQRLLPTRVVDGGVIGEEWLSCIYSAYLHSDAMQETCSGSTIYSN 66
KQ LP ++++GG+ G ++C++ L +Q +G +Y++
Sbjct: 4 KQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTS 48
>BC019033-1|AAH19033.1| 323|Homo sapiens solute carrier family 25
(mitochondrial carrier: glutamate), member 22 protein.
Length = 323
Score = 31.5 bits (68), Expect = 4.0
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = -3
Query: 200 KQRLLPTRVVDGGVIGEEWLSCIYSAYLHSDAMQETCSGSTIYSN 66
KQ LP ++++GG+ G ++C++ L +Q +G +Y++
Sbjct: 4 KQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTS 48
>AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence
similarity 22, member F protein.
Length = 655
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 246 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPA 371
R WR+ +P S+ +L GR P L P +R +P+P+
Sbjct: 549 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 590
>AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence
similarity 22, member G protein.
Length = 622
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 246 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPA 371
R WR+ +P S+ +L GR P L P +R +P+P+
Sbjct: 516 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 557
>AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 31.5 bits (68), Expect = 4.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 246 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPAV---RPITMFDQPIPWAP 416
R WR+ +P S+ +L GR P L P +R +P+P + +F P P A
Sbjct: 508 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 566
Query: 417 KVKYLG 434
K + G
Sbjct: 567 KTPHPG 572
>AK023106-1|BAB14407.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ13044 fis, clone NT2RP3001355, weakly similar to
TRICARBOXYLATE TRANSPORT PROTEIN PRECURSOR. ).
Length = 323
Score = 31.5 bits (68), Expect = 4.0
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = -3
Query: 200 KQRLLPTRVVDGGVIGEEWLSCIYSAYLHSDAMQETCSGSTIYSN 66
KQ LP ++++GG+ G ++C++ L +Q +G +Y++
Sbjct: 4 KQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTS 48
>AJ428202-1|CAD21007.1| 323|Homo sapiens glutamate carrier protein.
Length = 323
Score = 31.5 bits (68), Expect = 4.0
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = -3
Query: 200 KQRLLPTRVVDGGVIGEEWLSCIYSAYLHSDAMQETCSGSTIYSN 66
KQ LP ++++GG+ G ++C++ L +Q +G +Y++
Sbjct: 4 KQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTS 48
>BC127948-1|AAI27949.1| 353|Homo sapiens Unknown (protein for
MGC:158101) protein.
Length = 353
Score = 31.1 bits (67), Expect = 5.3
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +1
Query: 172 TTRVGRRRCFIDDFRPRLPPWDSGSGSGAST---LTPRKAQRCSSKGVALRTPR*ASPSR 342
T RV F+ F LP + S S +S+ L K R +G R PR + R
Sbjct: 3 TPRVLLSAVFLISFLWDLPGFQQASISSSSSSAELGSTKGMRSRKEGKMQRAPRDSDAGR 62
Query: 343 LGASIPPPP---PFAQS-RCSTSPYRGPR 417
G P P P AQ R P RGPR
Sbjct: 63 EGQEPQPRPQDEPRAQQPRAQEPPGRGPR 91
>BC127947-1|AAI27948.1| 271|Homo sapiens Unknown (protein for
MGC:158100) protein.
Length = 271
Score = 31.1 bits (67), Expect = 5.3
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +1
Query: 172 TTRVGRRRCFIDDFRPRLPPWDSGSGSGAST---LTPRKAQRCSSKGVALRTPR*ASPSR 342
T RV F+ F LP + S S +S+ L K R +G R PR + R
Sbjct: 3 TPRVLLSAVFLISFLWDLPGFQQASISSSSSSAELGSTKGMRSRKEGKMQRAPRDSDAGR 62
Query: 343 LGASIPPPP---PFAQS-RCSTSPYRGPR 417
G P P P AQ R P RGPR
Sbjct: 63 EGQEPQPRPQDEPRAQQPRAQEPPGRGPR 91
>AK123755-1|BAC85688.1| 258|Homo sapiens rCS1a) mRNA. protein.
Length = 258
Score = 31.1 bits (67), Expect = 5.3
Identities = 34/105 (32%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +1
Query: 178 RVGRRRCFIDDFRPRLPPWDSGSGSGASTLTPRKAQRCSSKG---VALRTPR*ASPSRLG 348
R RR F+ + PP SG PR + +S G + R R +SP+R G
Sbjct: 49 RTQRRPRSCQAFQGQHPPPVRSLSSGPPR-APRLSPAGASPGPQSASSRGQRASSPARSG 107
Query: 349 ASIPPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRY 483
+ P P ST+P R PR S+ S S VG P + RY
Sbjct: 108 RASRPTSPAE----STAPPRSPRTSSRVGSGSRVG-TRGPLAHRY 147
>AJ537424-1|CAD60934.1| 455|Homo sapiens growth/differentiation
factor 6 precursor protein.
Length = 455
Score = 31.1 bits (67), Expect = 5.3
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +1
Query: 172 TTRVGRRRCFIDDFRPRLPPWDSGSGSGAST---LTPRKAQRCSSKGVALRTPR*ASPSR 342
T RV F+ F LP + S S +S+ L K R +G R PR + R
Sbjct: 3 TPRVLLSAVFLISFLWDLPGFQQASISSSSSSAELGSTKGMRSRKEGKMQRAPRDSDAGR 62
Query: 343 LGASIPPPP---PFAQS-RCSTSPYRGPR 417
G P P P AQ R P RGPR
Sbjct: 63 EGQEPQPRPQDEPRAQQPRAQEPPGRGPR 91
>AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 133
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 147 LFADDTAIYYSCRKKALLHRRLQTAATTM-GQWFRKW 254
L +DDTA+YY R + + H + T G WF W
Sbjct: 86 LRSDDTAVYYCARDQGIPHYDFWSGITPEDGDWFDPW 122
>X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting
protein protein.
Length = 494
Score = 30.7 bits (66), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 217 PRLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 372
P PP+ G+ + R++ SS + R P +PSR PPPPP
Sbjct: 217 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPP 268
>BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein
protein.
Length = 510
Score = 30.7 bits (66), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 217 PRLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 372
P PP+ G+ + R++ SS + R P +PSR PPPPP
Sbjct: 217 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPP 268
>BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein.
Length = 403
Score = 30.7 bits (66), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 217 PRLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 372
P PP+ G+ + R++ SS + R P +PSR PPPPP
Sbjct: 217 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPP 268
>BC041329-1|AAH41329.1| 268|Homo sapiens ELL associated factor 1
protein.
Length = 268
Score = 30.7 bits (66), Expect = 7.0
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = +1
Query: 145 HSSPMTPPSTTRVGRRRCFIDDFRPRLPPWDSGS---GSGASTLTPRKAQRCSSKGVALR 315
H TPP T G +R + D + D+G +S++ +K + S + R
Sbjct: 64 HIPGSTPPMTVFKGNKRPYQKDC-VLIINHDTGEFVLEKLSSSIQVKKTRAEGSSKIQAR 122
Query: 316 TPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPRRSNI*ASPS 444
+ + + PPPPP R T P GP+ S + +PS
Sbjct: 123 MEQQPTRPPQTSQPPPPPPPMPFRAPTKPPVGPKTSPLKDNPS 165
>BC009743-1|AAH09743.1| 531|Homo sapiens coiled-coil domain
containing 9 protein.
Length = 531
Score = 30.7 bits (66), Expect = 7.0
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +1
Query: 253 GASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPRRSNI* 432
G + PRK + + VA+ + + PSR P PP A T P +G R
Sbjct: 49 GVAVTAPRKGRSVEKENVAVESEKNLGPSRRSPGTPRPPG-ASKGGRTPPQQGGRAGMGR 107
Query: 433 ASPSTVG 453
AS S G
Sbjct: 108 ASRSWEG 114
>BC002787-1|AAH02787.1| 531|Homo sapiens coiled-coil domain
containing 9 protein.
Length = 531
Score = 30.7 bits (66), Expect = 7.0
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +1
Query: 253 GASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPRRSNI* 432
G + PRK + + VA+ + + PSR P PP A T P +G R
Sbjct: 49 GVAVTAPRKGRSVEKENVAVESEKNLGPSRRSPGTPRPPG-ASKGGRTPPQQGGRAGMGR 107
Query: 433 ASPSTVG 453
AS S G
Sbjct: 108 ASRSWEG 114
>AY545071-1|AAS48631.1| 888|Homo sapiens breast cancer
anti-estrogen resistance 1 protein.
Length = 888
Score = 30.7 bits (66), Expect = 7.0
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = -3
Query: 251 LPEPLSHGGSRGLKSSMKQRLLPTRVVDGGVIGEEWLSCIYSAYLHSDAMQETCSGSTIY 72
+P L G L ++R+LP V DGGV+ + A + A + S S+
Sbjct: 392 VPPGLRRPGPGALYDVPRERVLPPEVADGGVVDSGVYAVPPPAEREAPAEGKRLSASSTG 451
Query: 71 SNNEMKSHRSLLVTG 27
S +S SL V G
Sbjct: 452 STRSSQSASSLEVAG 466
>AK095939-1|BAC04654.1| 377|Homo sapiens protein ( Homo sapiens
cDNA FLJ38620 fis, clone HEART2007767, weakly similar to
Mus musculus mRNA for E-MAP-115 protein. ).
Length = 377
Score = 30.7 bits (66), Expect = 7.0
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 265 LTPRKAQRCSSKGVALRTPR*ASPSR-LGASIPPPPPFAQSRCSTSPYRGPRRSNI*ASP 441
++P+ R SS + P PS G ++PP PP + ++ R R+ SP
Sbjct: 5 VSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRKEEAKESP 64
Query: 442 STVG*HSAPTSRRYA 486
S G S+R A
Sbjct: 65 SAAGPEDKSQSKRRA 79
>AF272973-1|AAK58687.1| 268|Homo sapiens EAF1 protein.
Length = 268
Score = 30.7 bits (66), Expect = 7.0
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = +1
Query: 145 HSSPMTPPSTTRVGRRRCFIDDFRPRLPPWDSGS---GSGASTLTPRKAQRCSSKGVALR 315
H TPP T G +R + D + D+G +S++ +K + S + R
Sbjct: 64 HIPGSTPPMTVFKGNKRPYQKDC-VLIINHDTGEYVLEKLSSSIQVKKTRAEGSSKIQAR 122
Query: 316 TPR*ASPSRLGASIPPPPPFAQSRCSTSPYRGPRRSNI*ASPS 444
+ + + PPPPP R T P GP+ S + +PS
Sbjct: 123 MEQQPTRPPQTSQPPPPPPPMPFRAPTKPPVGPKTSPLKDNPS 165
>AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrome
protein interacting protein protein.
Length = 312
Score = 30.7 bits (66), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 217 PRLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 372
P PP+ G+ + R++ SS + R P +PSR PPPPP
Sbjct: 26 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPP 77
>AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protein
protein.
Length = 503
Score = 30.7 bits (66), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 217 PRLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 372
P PP+ G+ + R++ SS + R P +PSR PPPPP
Sbjct: 217 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPP 268
>AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 30.7 bits (66), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 217 PRLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPP 372
P PP+ G+ + R++ SS + R P +PSR PPPPP
Sbjct: 217 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPP 268
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 1127 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 1182
>AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 744 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 799
>AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 744 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 799
>AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2948
Score = 30.3 bits (65), Expect = 9.2
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = +1
Query: 217 PRLPPWDSGSGSGASTLTPRK-AQRCSSKGVALRTPR*ASPSRLGASIPPPPP--FAQSR 387
P P D S S P K R S A TP +P + + PPPPP +
Sbjct: 1921 PSAPAGDRVEASTPSCPDPAKDLSRSSDSEEAFETPESTTPVKAPPAPPPPPPEVIPEPE 1980
Query: 388 CSTSP 402
ST P
Sbjct: 1981 VSTQP 1985
>AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2675
Score = 30.3 bits (65), Expect = 9.2
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = +1
Query: 217 PRLPPWDSGSGSGASTLTPRK-AQRCSSKGVALRTPR*ASPSRLGASIPPPPP--FAQSR 387
P P D S S P K R S A TP +P + + PPPPP +
Sbjct: 1648 PSAPAGDRVEASTPSCPDPAKDLSRSSDSEEAFETPESTTPVKAPPAPPPPPPEVIPEPE 1707
Query: 388 CSTSP 402
ST P
Sbjct: 1708 VSTQP 1712
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 1127 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 1182
>AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 744 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 799
>AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 744 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 799
>AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coiled
coil 2, long isoform protein.
Length = 2948
Score = 30.3 bits (65), Expect = 9.2
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = +1
Query: 217 PRLPPWDSGSGSGASTLTPRK-AQRCSSKGVALRTPR*ASPSRLGASIPPPPP--FAQSR 387
P P D S S P K R S A TP +P + + PPPPP +
Sbjct: 1921 PSAPAGDRVEASTPSCPDPAKDLSRSSDSEEAFETPESTTPVKAPPAPPPPPPEVIPEPE 1980
Query: 388 CSTSP 402
ST P
Sbjct: 1981 VSTQP 1985
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA1 protein.
Length = 1999
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 841 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 896
>AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 744 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 799
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein
p270 protein.
Length = 1927
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 769 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 824
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor 250a
protein.
Length = 2285
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 1127 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 1182
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling
factor p250 protein.
Length = 1939
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 781 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 836
>AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein
protein.
Length = 1208
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 744 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 799
>AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein.
Length = 1119
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 745 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 800
>AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein.
Length = 1142
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 214 RPRL-PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASPSRLGASIPPPPPFAQS 384
+P++ PP +GSGS TP+ ++G L+ P AS + IPP P ++S
Sbjct: 744 QPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPH--SQIPPLPGMSRS 799
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,002,553
Number of Sequences: 237096
Number of extensions: 3166052
Number of successful extensions: 16941
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 15239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16848
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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