Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P17
(847 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 67 2e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 64 1e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 64 1e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 8e-12
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 62 8e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 61 1e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 60 3e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 56 4e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 53 3e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 8e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 1e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 37 2e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 5e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.013
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.018
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.12
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 8.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.2
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 66.9 bits (156), Expect = 2e-13
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 388
N+ E ++ L+ W D +L W+ ++G + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNAD---G 121
Query: 389 DYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 556
+Y +R + + NG V W+ + ++ + +P D QTC KFGS N D++
Sbjct: 122 NYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSL 181
Query: 557 VIDXR-----IYSMFESGAWDVTDL 616
+ + ++SG WD+ ++
Sbjct: 182 ALYNNKNFVDLSDYWKSGTWDIINV 206
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.5 bits (150), Expect = 1e-12
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Frame = +2
Query: 125 STRSSQRTIGSLPPXSKIVVSLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 304
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 305 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 478
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 479 DNWPNDMQTCTFKFGSRMHNSDEMDFVI 562
+P D Q C KFGS ++ +++D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.5 bits (150), Expect = 1e-12
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Frame = +2
Query: 125 STRSSQRTIGSLPPXSKIVVSLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 304
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 305 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 478
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 479 DNWPNDMQTCTFKFGSRMHNSDEMDFVI 562
+P D Q C KFGS ++ +++D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 63.7 bits (148), Expect = 2e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 562
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 562
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 562
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 61.7 bits (143), Expect = 8e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 562
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.7 bits (143), Expect = 8e-12
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 427
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 428 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 553
V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 61.7 bits (143), Expect = 8e-12
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Frame = +2
Query: 140 QRTIGSLPPXSKIVVSLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTW 319
+R +G+ + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 320 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 493
L + RLW+PDV++ N+A G Y V NNG+ ++ + + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 494 DMQTCTFKFGSRMHNSDEMDFVIDXR----IYSMFESGAWDV 607
D Q C KFGS ++ ++D + I S +G WD+
Sbjct: 158 DDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 562
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 562
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Frame = +2
Query: 173 KIVVSLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 346
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 347 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 523
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 524 SRMHNSDEMD 553
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 61.3 bits (142), Expect = 1e-11
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 418
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 419 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 553
G VSW + + ++ +P D Q+C KFGS +N ++D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 60.1 bits (139), Expect = 3e-11
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Frame = +2
Query: 176 IVVSLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 343
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 344 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKF 520
PD+VL N A G + +A + G V W + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 521 GSRMHNSDEMD 553
GS ++ ++D
Sbjct: 164 GSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Frame = +2
Query: 173 KIVVSLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 346
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 347 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 514
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 515 KFGSRMHNSDEMD 553
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 58.4 bits (135), Expect = 8e-11
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Frame = +2
Query: 230 STVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYA 397
S + + + + + W D LSW ++ G + V S+ +W PD+ + N+ T G
Sbjct: 87 SVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPP 146
Query: 398 LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDXRIY 577
V ++GSVS + + + +WP D C FGS +H+ +E++ +D + +
Sbjct: 147 TTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGF 206
Query: 578 SM 583
M
Sbjct: 207 HM 208
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 56.0 bits (129), Expect = 4e-10
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Frame = +2
Query: 143 RTIGSLPPXSKIVVSLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 316
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 317 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDN 484
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 485 WPNDMQTCTFKFGSRMHNSDEMD 553
+P D QTC KFGS ++ +D
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +2
Query: 176 IVVSLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 352
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 353 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 526
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 527 RMHNSDEMD 553
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 53.2 bits (122), Expect = 3e-09
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +2
Query: 215 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 385
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 526
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 49.2 bits (112), Expect = 5e-08
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Frame = +2
Query: 182 VSLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 358
+ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 359 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMQTCTFKFGS 526
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 527 RMHNSDEM 550
H S+E+
Sbjct: 180 WSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.4 bits (110), Expect = 8e-08
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +2
Query: 257 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGS 427
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 428 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 526
+ + RL I M+L N+P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.4 bits (100), Expect = 1e-06
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +2
Query: 179 VVSLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 349
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 350 DVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKF 520
D+ N + + R+ NGSV + R+ ++ M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 521 GSRMHNSDEMDFV 559
S +D++ F+
Sbjct: 179 ASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +2
Query: 266 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 430
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 431 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 559
+ R+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 215 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 394
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 395 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 526
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 266 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 418
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 419 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 526
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 266 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 418
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 419 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 526
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 266 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 418
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 419 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 526
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 37.1 bits (82), Expect = 2e-04
Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Frame = +2
Query: 224 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 391
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 392 YALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 559
++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + ++ F+
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 502
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 503 TCTFKFGSRMHNSDEMDFVID 565
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.001
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Frame = +2
Query: 125 STRSSQRTIGSLPPXSKIVVSLTLHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGE 301
STR +R + + + VS+ L L A+ ES + LQ W D RL + N +
Sbjct: 71 STRYDKRLLPPVQGTLTVNVSVLL-LSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 302 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 475
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 476 LDNWPNDMQTCTFKFGSRMHNSDEMDFV 559
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 34.7 bits (76), Expect = 0.001
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Frame = +2
Query: 125 STRSSQRTIGSLPPXSKIVVSLTLHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGE 301
STR +R + + + VS+ L L A+ ES + LQ W D RL + N +
Sbjct: 71 STRYDKRLLPPVQGTLTVNVSVLL-LSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 302 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 475
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 476 LDNWPNDMQTCTFKFGSRMHNSDEMDFV 559
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 34.7 bits (76), Expect = 0.001
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Frame = +2
Query: 125 STRSSQRTIGSLPPXSKIVVSLTLHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGE 301
STR +R + + + VS+ L L A+ ES + LQ W D RL + N +
Sbjct: 71 STRYDKRLLPPVQGTLTVNVSVLL-LSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 302 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 475
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 476 LDNWPNDMQTCTFKFGSRMHNSDEMDFV 559
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.013
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 338 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 508
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 509 TFKFGSRMHNSDEM 550
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.7 bits (66), Expect = 0.018
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Frame = +2
Query: 254 LQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNG 424
LQ W D RL + N ++ + + +W PD ++ R+ NG
Sbjct: 164 LQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNG 223
Query: 425 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 559
+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 224 TVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.12
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 496
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 497 MQTCTFKFGSRMHNSDEM 550
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 568 KNIQYVRVRSVGCDGSCPXRC 630
KN+ +RS G +G P RC
Sbjct: 74 KNLYQSHLRSHGKEGEDPYRC 94
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 319 PSAAAPFPCVPTQS 278
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,405
Number of Sequences: 438
Number of extensions: 4473
Number of successful extensions: 91
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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