Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P15
(921 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1174 - 26696869-26698191 31 1.7
07_01_0907 - 7636725-7637681 31 1.7
06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489... 30 2.3
06_01_0671 - 4899611-4899829,4900870-4901448 30 2.3
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.3
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 30 3.0
08_01_0059 - 394001-394708 29 3.9
06_01_0553 + 3942907-3943617 29 3.9
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 29 5.2
12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409... 29 6.9
09_04_0031 + 13946692-13946774,13947007-13948012 29 6.9
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 6.9
05_01_0493 + 4113869-4116728,4116859-4117370 29 6.9
04_04_1125 + 31085106-31085714 29 6.9
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 28 9.1
09_04_0028 - 13928542-13929538,13929736-13929818 28 9.1
08_02_0797 + 21307534-21307639,21307907-21308988,21309385-213094... 28 9.1
07_03_1160 - 24430240-24431268 28 9.1
06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849 28 9.1
06_03_0570 - 22363197-22363588,22363755-22366782 28 9.1
02_01_0584 - 4326072-4326094,4326306-4326885 28 9.1
01_06_0317 + 28425408-28426079,28426286-28426351 28 9.1
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 742 PXPKXPXAQPRPXVPXXAXPHXPSPPP 822
P K P QP+P P P P PPP
Sbjct: 168 PSVKPPVVQPKPQPPPSLQPPSPPPPP 194
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 742 PXPKXPXAQPRPXVPXXAXPHXPSPPP 822
P K P QP+P P P P PPP
Sbjct: 199 PSVKPPVVQPKPQPPPTLPPPSPPPPP 225
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +1
Query: 742 PXPKXPXAQPRPXVPXXAXPHXPSPPPR-XCXXXXQXXXTPXRXXXXXXRGPNPPXXTXP 918
P P P QP P +P P P PPPR P P PP T P
Sbjct: 141 PPPVKP--QPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRP 198
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/61 (26%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +1
Query: 742 PXPKXPXAQPRPXV--PXXAXPHXPSPPPRXCXXXXQXXXTPXRXXXXXXRGPNPPXXTX 915
P P+ P PR V P P PPP + +P P PP +
Sbjct: 242 PKPQPPPPPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSP 301
Query: 916 P 918
P
Sbjct: 302 P 302
>07_01_0907 - 7636725-7637681
Length = 318
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 860 GVXXXWXXXXXXRGGGEGXWGXAXXGTXGRGWA 762
G W RGGG+G G A G G GW+
Sbjct: 272 GSLQFWGGGGGHRGGGDGAGGSAAPGGGGGGWS 304
>06_03_1450 +
30246702-30247346,30248603-30248689,30248789-30248920,
30249016-30249162,30250375-30250440,30250519-30250629,
30251551-30251584,30251667-30251743,30251829-30251906
Length = 458
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 739 APXPKXPXAQPRPXVPXXAXPHXPSPPP 822
AP P P QP+P P PH P+P P
Sbjct: 61 APPPAAP--QPQPYYPYEPPPHNPAPSP 86
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 393 CRPRLAVPRQASTSVPRTPAKCCSPIRPAFQLSRLS 286
CRP L +P + +S PR C+P AF+ LS
Sbjct: 9 CRPSLLLPPRQRSSPPRPRPLLCTPSTAAFRRGALS 44
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +1
Query: 742 PXPKXPXAQPRPXVPXXAXPHXPSPPPRXCXXXXQXXXTPXRXXXXXXRGPNPPXXTXP 918
P PK A P P P A P P PPP+ P +GP+PP P
Sbjct: 317 PPPKPAAAAPPPPPPPKAAP--PPPPPKGPPPPPPAKGPP---PPPPPKGPSPPPPPPP 370
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 739 APXPKXPXAQPRPXVPXXAXPHXPSPPP 822
AP P P + P+ P + PH P+PPP
Sbjct: 150 APSPPAPPSPPQDPAP--SLPHAPAPPP 175
>08_01_0059 - 394001-394708
Length = 235
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 742 PXPKXPXAQPRPXV-PXXAXPHXPSPPP 822
P P P A P P + P P PSPPP
Sbjct: 46 PPPSHPLAPPPPHISPPAPVPPPPSPPP 73
>06_01_0553 + 3942907-3943617
Length = 236
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/75 (29%), Positives = 29/75 (38%)
Frame = +2
Query: 239 SESTVRILADLQMNWIDKRLSWNAGRMGLQHLAGVLGTLVEA*RGTAKRGLQPPPGTTLS 418
S S+ LA +++ W RL A R LA L ++ R +PPP L
Sbjct: 67 SSSSSSSLAAVRLPWRATRLLAAAARRAALSLAARLRSVARRDRAAVAVAPRPPPPPQLW 126
Query: 419 APVYLIXAPPPXIKR 463
P PPP R
Sbjct: 127 KPPRARAPPPPSATR 141
>04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -1
Query: 450 GGGAXIRYTGAESVVPGGGCR--PRLAVPRQASTSVPRTPAKCCSP 319
G A + +G S+ GGGCR + +P + + + PA C +P
Sbjct: 1356 GASASLAGSGDRSLFCGGGCRGADEVGIPSEDVSLSEKPPATCTTP 1401
>12_02_0370 +
18139557-18140469,18140561-18140704,18140804-18140956,
18141032-18141147,18141231-18141398,18142110-18142334,
18142458-18142577
Length = 612
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +1
Query: 742 PXPKXPXAQPRPXVPXXAXP--HXPSPPPRXCXXXXQXXXTPXRXXXXXXRGP 894
P P P +P+P P P PSPPP Q P + + P
Sbjct: 70 PPPPQPQPEPQPAAPSQPPPPQEQPSPPPPASSNTTQQPPPPQQRQQSRAKKP 122
>09_04_0031 + 13946692-13946774,13947007-13948012
Length = 362
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 316 NGAAALGWCPRNACGGLTWYC*TRPATTAGDYALR 420
NG AALGW R+ G L+ + TR D ++
Sbjct: 4 NGTAALGWAARDTSGHLSPFSFTRRVQQEDDVTIK 38
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +1
Query: 712 PNXXIXGXXAPXPKXPXAQPRPXVPXXAXPHXPSPPPR 825
P + P P P P P P P PPPR
Sbjct: 97 PPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPR 134
>05_01_0493 + 4113869-4116728,4116859-4117370
Length = 1123
Score = 28.7 bits (61), Expect = 6.9
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 149 SSQRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILAD-LQMNWIDKRLSWNAGRMGL 325
+S R G+LPP NLT H N E R+ D L + ++D LS N G+
Sbjct: 493 ASNRLAGALPPEMSGCRNLTFVDLHDNAISGELPPRLFRDWLSLQYLD--LSDNVIAGGI 550
Query: 326 QHLAGVLGTLVE-A*RGTAKRGLQPP 400
G+L +L + G G PP
Sbjct: 551 PPEIGMLTSLTKLVLGGNRLSGPMPP 576
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 742 PXPKXPXAQPRPXVPXXAXPHXPSPPP 822
P P P P P P A P P+P P
Sbjct: 51 PTPATPTTPPTPWTPPPATPTPPTPTP 77
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = -1
Query: 450 GGGAXIRYTGAESVVPGGGCR-PRLAVPRQASTSV---PRTPA 334
GGG +G PGG PR P A+TSV PR PA
Sbjct: 72 GGGGGGPVSGGGGSAPGGAATAPRQGAPPAAATSVQGAPRAPA 114
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 316 NGAAALGWCPRNACGGLTWYC*TRPATTAGDYALR 420
+G AALGW R+A G L+ + TR D ++
Sbjct: 4 DGTAALGWAARDASGHLSPFSFTRRVQEEDDVTIK 38
>08_02_0797 +
21307534-21307639,21307907-21308988,21309385-21309432,
21309705-21310217
Length = 582
Score = 28.3 bits (60), Expect = 9.1
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = -3
Query: 415 ERSPRRWLQA-AFSSTTSGLHKRSEDTSQVLQPHSPCVPT---QSFVDPIHLKICQYPHG 248
+ S WL SSTTSG H+R + V ++ F + + + PHG
Sbjct: 226 QHSVEYWLTLDILSSTTSGDHRRRRPCTAVRVTNASLADVFLVPFFASLSYNRQSKSPHG 285
Query: 247 GLGLTNVSMSQMQGQV 200
G G S Q+QG++
Sbjct: 286 GHGSGGRSDRQLQGEL 301
>07_03_1160 - 24430240-24431268
Length = 342
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/59 (23%), Positives = 18/59 (30%)
Frame = +1
Query: 742 PXPKXPXAQPRPXVPXXAXPHXPSPPPRXCXXXXQXXXTPXRXXXXXXRGPNPPXXTXP 918
P P P +P P P P PP+ C P + P+ P P
Sbjct: 232 PIPNGPIKPDQPPQPNPDMPPKPDQPPQPCPDGPPKPDQPPQPNPNGPPKPDQPPQPNP 290
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/65 (24%), Positives = 21/65 (32%)
Frame = +1
Query: 709 VPNXXIXGXXAPXPKXPXAQPRPXVPXXAXPHXPSPPPRXCXXXXQXXXTPXRXXXXXXR 888
+PN I P P P P+P P P P P + P +
Sbjct: 233 IPNGPIKPDQPPQPN-PDMPPKPDQPPQPCPDGPPKPDQPPQPNPNGPPKPDQPPQPNPN 291
Query: 889 GPNPP 903
GP+ P
Sbjct: 292 GPSKP 296
>06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849
Length = 489
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 742 PXPKXPXAQPRPXVPXXAXPHXPSPPPR 825
P P+ P P P +P PH PPPR
Sbjct: 116 PFPRPPP--PPPEMPVGMHPHPHEPPPR 141
>06_03_0570 - 22363197-22363588,22363755-22366782
Length = 1139
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 286 RQTTELERRANGAAALGWCPRNACGGLTWYC*TRPATTAGDYALRARVSNXGSA 447
R +T +E + AAAL + N C +C +P+ D A+ ARVS+ G A
Sbjct: 928 RLSTRIEIALDMAAALDYL-HNRCMPPIVHCDLKPSNVLLDNAMGARVSDFGLA 980
>02_01_0584 - 4326072-4326094,4326306-4326885
Length = 200
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/58 (34%), Positives = 22/58 (37%)
Frame = -1
Query: 567 RXXWAS*EPNLNGQVCMXLGPIV*TA*KLECXMSKRFIXGGGAXIRYTGAESVVPGGG 394
R W S P L G + LG I + L C K GGG G E GGG
Sbjct: 40 RSPWQSPVPYLFGGLAAMLGLIALSLLALACSYWKLAAAGGGGGGGQDGGEESRDGGG 97
>01_06_0317 + 28425408-28426079,28426286-28426351
Length = 245
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 742 PXPKXPXAQPRPXVPXXAXPHXPSPPP 822
P PK P P P P P PPP
Sbjct: 106 PQPKPQPRSPEPETPPAPAPLPPPPPP 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,234,161
Number of Sequences: 37544
Number of extensions: 443277
Number of successful extensions: 2265
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2173
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -