Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P15
(921 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 32 3.4
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 32 3.4
L20969-1|AAC00042.1| 809|Homo sapiens cyclic AMP phosphodiester... 31 5.9
BC030201-1|AAH30201.2| 370|Homo sapiens calcium binding protein... 31 5.9
D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein. 31 7.8
AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coacti... 31 7.8
AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coacti... 31 7.8
AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactiv... 31 7.8
AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified transc... 31 7.8
AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone recepto... 31 7.8
AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coacti... 31 7.8
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 31.9 bits (69), Expect = 3.4
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 739 APXPKXPXAQPRPXVPXXAXPHXPSPPP 822
AP P P P P P A P P PPP
Sbjct: 126 APTPSSPPPPPLPPPPPPAMPSPPPPPP 153
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 31.9 bits (69), Expect = 3.4
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 739 APXPKXPXAQPRPXVPXXAXPHXPSPPP 822
AP P P P P P A P P PPP
Sbjct: 671 APTPSSPPPPPLPPPPPPAMPSPPPPPP 698
>L20969-1|AAC00042.1| 809|Homo sapiens cyclic AMP phosphodiesterase
protein.
Length = 809
Score = 31.1 bits (67), Expect = 5.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 742 PXPKXPXAQPRPXVPXXAXPHXPSPPP 822
P P P QP+P P P P PPP
Sbjct: 58 PPPPPPSPQPQPQCPLQPPPPPPLPPP 84
>BC030201-1|AAH30201.2| 370|Homo sapiens calcium binding protein 1
protein.
Length = 370
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 423 GAESVVPGGGCRPRLAVPRQASTSVPRTP 337
G++ V+P CRPR A+P AS P +P
Sbjct: 133 GSQRVLPRAHCRPREALPAAASRPSPSSP 161
>D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein.
Length = 2079
Score = 30.7 bits (66), Expect = 7.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 739 APXPKXPXAQPRPXVPXXAXPHXPSPP 819
AP P+ P QP+P +P P PS P
Sbjct: 1011 APPPQPPQQQPQPQLPQQQQPPPPSQP 1037
>AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coactivator
6 protein.
Length = 2063
Score = 30.7 bits (66), Expect = 7.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 739 APXPKXPXAQPRPXVPXXAXPHXPSPP 819
AP P+ P QP+P +P P PS P
Sbjct: 995 APPPQPPQQQPQPQLPQQQQPPPPSQP 1021
>AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coactivator
protein.
Length = 2063
Score = 30.7 bits (66), Expect = 7.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 739 APXPKXPXAQPRPXVPXXAXPHXPSPP 819
AP P+ P QP+P +P P PS P
Sbjct: 995 APPPQPPQQQPQPQLPQQQQPPPPSQP 1021
>AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactivator
AIB3 protein.
Length = 2001
Score = 30.7 bits (66), Expect = 7.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 739 APXPKXPXAQPRPXVPXXAXPHXPSPP 819
AP P+ P QP+P +P P PS P
Sbjct: 933 APPPQPPQQQPQPQLPQQQQPPPPSQP 959
>AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified
transcriptional coactivator ASC-2 protein.
Length = 2063
Score = 30.7 bits (66), Expect = 7.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 739 APXPKXPXAQPRPXVPXXAXPHXPSPP 819
AP P+ P QP+P +P P PS P
Sbjct: 995 APPPQPPQQQPQPQLPQQQQPPPPSQP 1021
>AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone receptor
binding protein protein.
Length = 2063
Score = 30.7 bits (66), Expect = 7.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 739 APXPKXPXAQPRPXVPXXAXPHXPSPP 819
AP P+ P QP+P +P P PS P
Sbjct: 995 APPPQPPQQQPQPQLPQQQQPPPPSQP 1021
>AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coactivator
RAP250 protein.
Length = 2063
Score = 30.7 bits (66), Expect = 7.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 739 APXPKXPXAQPRPXVPXXAXPHXPSPP 819
AP P+ P QP+P +P P PS P
Sbjct: 995 APPPQPPQQQPQPQLPQQQQPPPPSQP 1021
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,015,688
Number of Sequences: 237096
Number of extensions: 2195602
Number of successful extensions: 8389
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8143
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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