Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P14
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical p... 118 7e-27
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 116 3e-26
Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z74040-2|CAA98513.1| 287|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical pr... 30 1.8
U12965-8|AAA20606.1| 345|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 29 3.2
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 29 5.5
Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical pr... 28 9.7
AJ561210-1|CAD99212.1| 151|Caenorhabditis elegans NAS-20 protei... 28 9.7
>U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical
protein C44B7.2b protein.
Length = 339
Score = 118 bits (283), Expect = 7e-27
Identities = 54/108 (50%), Positives = 77/108 (71%), Gaps = 1/108 (0%)
Frame = +1
Query: 220 ARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKK-NGVQAMVEFESVESATRA 396
A PN +L+ T++N YPI DVI+ IS G+V R+ V K VQA+VEFES+E A A
Sbjct: 117 ATPNKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAA 176
Query: 397 KEALHGCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQ 540
K A++G DIYSGCCTLK+EFAKP+++ V + D++ D+TL ++ +P +
Sbjct: 177 KHAMNGADIYSGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDNRRPYE 224
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 116 bits (278), Expect = 3e-26
Identities = 59/126 (46%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
Frame = +1
Query: 220 ARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKK-NGVQAMVEFESVESATRA 396
A PN +L+ T++N YPI DVI+ IS G+V R+ V K VQA+VEFES+E A A
Sbjct: 117 ATPNKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAA 176
Query: 397 KEALHGCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYTL--SEDLQPVQRSAPLLQSPQ 570
K A++G DIYSGCCTLK+EFAKP+++ V + D++ D+TL +E Q R + P
Sbjct: 177 KHAMNGADIYSGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDNESFQDTGRKTLIPAKPD 236
Query: 571 YTGGRP 588
RP
Sbjct: 237 DHYRRP 242
>Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical
protein D2089.4b protein.
Length = 453
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/98 (40%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +1
Query: 223 RPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKNGV-QAMVEFESVESATRAK 399
+PN +L I N +P+++DV++ + T +G+V RI+ F KN QA+V+ SA AK
Sbjct: 65 QPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAK 124
Query: 400 EALHGCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYT 513
+ L ++Y+GCCTL+I+++K LNV N+ +S DYT
Sbjct: 125 QGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYT 162
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/98 (40%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +1
Query: 223 RPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKNGV-QAMVEFESVESATRAK 399
+PN +L I N +P+++DV++ + T +G+V RI+ F KN QA+V+ SA AK
Sbjct: 227 QPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAK 286
Query: 400 EALHGCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYT 513
+ L ++Y+GCCTL+I+++K LNV N+ +S DYT
Sbjct: 287 QGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYT 324
>Z74040-2|CAA98513.1| 287|Caenorhabditis elegans Hypothetical
protein K10D6.2b protein.
Length = 287
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 469 KLNVFKNDQESWDYTLSEDLQPVQRSAPLLQ----SPQYTGGRPQPYNPNSTPS 618
K N+F Q++ TLS + P +R PLL S Q G RP P P T S
Sbjct: 225 KENLFTWQQQTQPVTLSVNELPYRREEPLLHDKFVSSQQAGYRPNPQVPYRTTS 278
>Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical
protein R03D7.2 protein.
Length = 542
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +3
Query: 201 PQTKATGAA----EPHTALHHHQSGISHHCGRNTHNKHPARTSAKDRRLQEEWR 350
P +K GAA PH HH S++ + H++ R ++ +R Q +W+
Sbjct: 8 PSSKIDGAAPRSRSPHRRQPHHSRSSSNNISSSLHSRLRRRRRSRSQRKQLQWQ 61
>U12965-8|AAA20606.1| 345|Caenorhabditis elegans Hypothetical
protein F23F12.4 protein.
Length = 345
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 515 NV*SQLSWSF-LNTFNFSGFANSILSVQHPEYMSQPCSASFALVADSTLSNSTI 357
NV ++W F NFS F L+++H +++ S A TL+NS +
Sbjct: 205 NVAPHVNWGFEYPVSNFSNFCQKFLTIEHAHWVTVHHLKSLRNCASVTLNNSKL 258
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 165 EQRQQLHGRRAMPQTKATGAAEPHTALHHH 254
+Q+Q L MP +TGAA P T HHH
Sbjct: 577 QQQQTLTNSMYMPIVTSTGAAVPLTNGHHH 606
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 165 EQRQQLHGRRAMPQTKATGAAEPHTALHHHQSGISHHCGRNTHNKHPA-RTSAKDR 329
++R + G+ P +A + H HHH +H+ RN H H R +DR
Sbjct: 48 DRRHRSPGKHIAP-ARAHNRGQHHNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDR 102
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 165 EQRQQLHGRRAMPQTKATGAAEPHTALHHHQSGISHHCGRNTHNKHPA-RTSAKDR 329
++R + G+ P +A + H HHH +H+ RN H H R +DR
Sbjct: 892 DRRHRSPGKHIAP-ARAHNRGQHHNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDR 946
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 532 PVQRSAPLLQSPQYTGGRPQPYNPNSTP 615
P S P + +P TG PY P+STP
Sbjct: 170 PYPSSQPTMPTPYPTGSGAAPYPPSSTP 197
>Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical
protein T11F9.3 protein.
Length = 379
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 22 HPRRRVCRLQFYQNGFRCD*CFVLLCMMAYNG 117
HPR+ C+ YQN C+ C LC +NG
Sbjct: 212 HPRKLDCKNGGYQNPANCEEC---LCTDGFNG 240
>AJ561210-1|CAD99212.1| 151|Caenorhabditis elegans NAS-20 protein
protein.
Length = 151
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 22 HPRRRVCRLQFYQNGFRCD*CFVLLCMMAYNG 117
HPR+ C+ YQN C+ C LC +NG
Sbjct: 55 HPRKLDCKNGGYQNPANCEEC---LCTDGFNG 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,812,861
Number of Sequences: 27780
Number of extensions: 478444
Number of successful extensions: 1722
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1717
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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