Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P13
(846 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007890-1|AAH07890.1| 263|Homo sapiens UBAP2 protein protein. 32 3.0
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 32 3.0
AL139113-8|CAI39659.1| 358|Homo sapiens ubiquitin associated pr... 32 3.0
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 32 3.0
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 32 3.0
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 32 3.0
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.0
X80878-1|CAA56846.1| 1324|Homo sapiens R kappa B protein. 31 4.0
U08191-1|AAA17871.1| 998|Homo sapiens R kappa B protein. 31 4.0
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.0
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.0
BC063280-1|AAH63280.1| 1299|Homo sapiens NFRKB protein protein. 31 4.0
AL512730-1|CAC21663.1| 645|Homo sapiens hypothetical protein pr... 31 4.0
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.0
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.0
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.0
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.0
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.0
AF157327-1|AAF67493.1| 583|Homo sapiens AD-012 protein protein. 31 5.3
>BC007890-1|AAH07890.1| 263|Homo sapiens UBAP2 protein protein.
Length = 263
Score = 31.9 bits (69), Expect = 3.0
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +2
Query: 530 SSHPPLRSRLHQPDHQIPXFHTPT-TPDLTSISINPXXRRTKKEFAPGLKPPLSSEAPSA 706
SS P +S P + + T PD+T N K+ F G PP S +
Sbjct: 131 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 190
Query: 707 YLTPSSLGMAXGVSPPYF 760
P + G A G +PP F
Sbjct: 191 STGPLASGAAPGYAPPPF 208
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated protein
2 protein.
Length = 1119
Score = 31.9 bits (69), Expect = 3.0
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +2
Query: 530 SSHPPLRSRLHQPDHQIPXFHTPT-TPDLTSISINPXXRRTKKEFAPGLKPPLSSEAPSA 706
SS P +S P + + T PD+T N K+ F G PP S +
Sbjct: 987 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 1046
Query: 707 YLTPSSLGMAXGVSPPYF 760
P + G A G +PP F
Sbjct: 1047 STGPLASGAAPGYAPPPF 1064
>AL139113-8|CAI39659.1| 358|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 358
Score = 31.9 bits (69), Expect = 3.0
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +2
Query: 530 SSHPPLRSRLHQPDHQIPXFHTPT-TPDLTSISINPXXRRTKKEFAPGLKPPLSSEAPSA 706
SS P +S P + + T PD+T N K+ F G PP S +
Sbjct: 226 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 285
Query: 707 YLTPSSLGMAXGVSPPYF 760
P + G A G +PP F
Sbjct: 286 STGPLASGAAPGYAPPPF 303
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated protein
2 protein.
Length = 1119
Score = 31.9 bits (69), Expect = 3.0
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +2
Query: 530 SSHPPLRSRLHQPDHQIPXFHTPT-TPDLTSISINPXXRRTKKEFAPGLKPPLSSEAPSA 706
SS P +S P + + T PD+T N K+ F G PP S +
Sbjct: 987 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 1046
Query: 707 YLTPSSLGMAXGVSPPYF 760
P + G A G +PP F
Sbjct: 1047 STGPLASGAAPGYAPPPF 1064
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 31.9 bits (69), Expect = 3.0
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +2
Query: 530 SSHPPLRSRLHQPDHQIPXFHTPT-TPDLTSISINPXXRRTKKEFAPGLKPPLSSEAPSA 706
SS P +S P + + T PD+T N K+ F G PP S +
Sbjct: 465 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 524
Query: 707 YLTPSSLGMAXGVSPPYF 760
P + G A G +PP F
Sbjct: 525 STGPLASGAAPGYAPPPF 542
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 31.9 bits (69), Expect = 3.0
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +2
Query: 530 SSHPPLRSRLHQPDHQIPXFHTPT-TPDLTSISINPXXRRTKKEFAPGLKPPLSSEAPSA 706
SS P +S P + + T PD+T N K+ F G PP S +
Sbjct: 625 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 684
Query: 707 YLTPSSLGMAXGVSPPYF 760
P + G A G +PP F
Sbjct: 685 STGPLASGAAPGYAPPPF 702
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>X80878-1|CAA56846.1| 1324|Homo sapiens R kappa B protein.
Length = 1324
Score = 31.5 bits (68), Expect = 4.0
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Frame = +2
Query: 530 SSHPPLRSRLHQPDHQIPXFH----TPTTPDLTSISINPXXRRTKKEFAPGL--KPPLSS 691
SS P +S++ D +P TPTTP L +I I+P + P +P SS
Sbjct: 724 SSGPSEQSQMSLSDSSMPPTPVTPVTPTTPALPAIPISPPPVSAVNKSGPSTVSEPAKSS 783
Query: 692 EAPSAYLTPSSLGMAXGVSPPYFQVNDXSQASRLXXRHS 808
+P+ + +SP Q SQA+ HS
Sbjct: 784 SGVLLVSSPTMPHLGTMLSPASSQTAPSSQAAARVVSHS 822
>U08191-1|AAA17871.1| 998|Homo sapiens R kappa B protein.
Length = 998
Score = 31.5 bits (68), Expect = 4.0
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Frame = +2
Query: 530 SSHPPLRSRLHQPDHQIPXFH----TPTTPDLTSISINPXXRRTKKEFAPGL--KPPLSS 691
SS P +S++ D +P TPTTP L +I I+P + P +P SS
Sbjct: 412 SSGPSEQSQMSLSDSSMPPTPVTPVTPTTPALPAIPISPPPVSAVNKSGPSTVSEPAKSS 471
Query: 692 EAPSAYLTPSSLGMAXGVSPPYFQVNDXSQASRLXXRHS 808
+P+ + +SP Q SQA+ HS
Sbjct: 472 SGVLLVSSPTMPHLGTMLSPASSQTAPSSQAAARVVSHS 510
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>BC063280-1|AAH63280.1| 1299|Homo sapiens NFRKB protein protein.
Length = 1299
Score = 31.5 bits (68), Expect = 4.0
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Frame = +2
Query: 530 SSHPPLRSRLHQPDHQIPXFH----TPTTPDLTSISINPXXRRTKKEFAPGL--KPPLSS 691
SS P +S++ D +P TPTTP L +I I+P + P +P SS
Sbjct: 699 SSGPSEQSQMSLSDSSMPPTPVTPVTPTTPALPAIPISPPPVSAVNKSGPSTVSEPAKSS 758
Query: 692 EAPSAYLTPSSLGMAXGVSPPYFQVNDXSQASRLXXRHS 808
+P+ + +SP Q SQA+ HS
Sbjct: 759 SGVLLVSSPTMPHLGTMLSPASSQTAPSSQAAARVVSHS 797
>AL512730-1|CAC21663.1| 645|Homo sapiens hypothetical protein
protein.
Length = 645
Score = 31.5 bits (68), Expect = 4.0
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Frame = +2
Query: 530 SSHPPLRSRLHQPDHQIPXFH----TPTTPDLTSISINPXXRRTKKEFAPGL--KPPLSS 691
SS P +S++ D +P TPTTP L +I I+P + P +P SS
Sbjct: 45 SSGPSEQSQMSLSDSSMPPTPVTPVTPTTPALPAIPISPPPVSAVNKSGPSTVSEPAKSS 104
Query: 692 EAPSAYLTPSSLGMAXGVSPPYFQVNDXSQASRLXXRHS 808
+P+ + +SP Q SQA+ HS
Sbjct: 105 SGVLLVSSPTMPHLGTMLSPASSQTAPSSQAAARVVSHS 143
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AF157327-1|AAF67493.1| 583|Homo sapiens AD-012 protein protein.
Length = 583
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 593 TPTTPDLTSISINPXXRRTKKEFAPGLKPPLSSEAPSAYLTPSSLGMAXGVSPPYF 760
T PD+T N K+ F G PP S + P + G A G +PP F
Sbjct: 443 TTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLGSTGPLAQGAAPGYAPPPF 498
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,226,968
Number of Sequences: 237096
Number of extensions: 2508349
Number of successful extensions: 6213
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6210
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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