Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_P13
         (846 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    36   0.070
AF264755-1|AAK20947.1| 1062|Drosophila melanogaster Mlx interact...    30   3.5  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   8.0  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   8.0  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 35.9 bits (79), Expect = 0.070
 Identities = 21/74 (28%), Positives = 32/74 (43%)
 Frame = +2

Query: 533 SHPPLRSRLHQPDHQIPXFHTPTTPDLTSISINPXXRRTKKEFAPGLKPPLSSEAPSAYL 712
           ++PP   RL  P    P +  PT   L  +++    R T +   P  KPP  +  P+ YL
Sbjct: 466 TYPPTTRRLTTP---APTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPP--TRPPTTYL 520

Query: 713 TPSSLGMAXGVSPP 754
            P ++       PP
Sbjct: 521 PPPTVRTTRPPPPP 534



 Score = 35.9 bits (79), Expect = 0.070
 Identities = 21/74 (28%), Positives = 32/74 (43%)
 Frame = +2

Query: 533 SHPPLRSRLHQPDHQIPXFHTPTTPDLTSISINPXXRRTKKEFAPGLKPPLSSEAPSAYL 712
           ++PP   RL  P    P +  PT   L  +++    R T +   P  KPP  +  P+ YL
Sbjct: 677 TYPPTTRRLTTP---APTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPP--TRPPTTYL 731

Query: 713 TPSSLGMAXGVSPP 754
            P ++       PP
Sbjct: 732 PPPTVRTTRPPPPP 745



 Score = 35.1 bits (77), Expect = 0.12
 Identities = 20/74 (27%), Positives = 33/74 (44%)
 Frame = +2

Query: 533 SHPPLRSRLHQPDHQIPXFHTPTTPDLTSISINPXXRRTKKEFAPGLKPPLSSEAPSAYL 712
           ++PP   RL  P    P +  PT   L  +++    R T +   P  +PP  ++ P+ YL
Sbjct: 780 TYPPTTRRLTTP---APTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTRPP--TKPPTTYL 834

Query: 713 TPSSLGMAXGVSPP 754
            P ++       PP
Sbjct: 835 PPPTVRTTRPPPPP 848



 Score = 34.3 bits (75), Expect = 0.21
 Identities = 22/81 (27%), Positives = 33/81 (40%)
 Frame = +2

Query: 512 RSRPYASSHPPLRSRLHQPDHQIPXFHTPTTPDLTSISINPXXRRTKKEFAPGLKPPLSS 691
           R  P  +  PP  +R   P    P +  PT   L  +++    R T +   P  KPP  +
Sbjct: 356 RPTPPPTRPPPPPTRASTP---APTYLPPTNKPLPPVTVRTTVRTTPRPTPPPTKPP--T 410

Query: 692 EAPSAYLTPSSLGMAXGVSPP 754
             P+ YL P ++       PP
Sbjct: 411 RPPTTYLPPPTVRTTRPPPPP 431



 Score = 34.3 bits (75), Expect = 0.21
 Identities = 22/78 (28%), Positives = 32/78 (41%)
 Frame = +2

Query: 521 PYASSHPPLRSRLHQPDHQIPXFHTPTTPDLTSISINPXXRRTKKEFAPGLKPPLSSEAP 700
           P  +  PP  +R   P    P +  PT   L  +++    R T +   P  KPP  +  P
Sbjct: 570 PPPTRPPPPPTRASTP---APTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPP--TRPP 624

Query: 701 SAYLTPSSLGMAXGVSPP 754
           + YL P S+       PP
Sbjct: 625 TTYLPPPSVRTTRPPPPP 642


>AF264755-1|AAK20947.1| 1062|Drosophila melanogaster Mlx interactor
           beta protein.
          Length = 1062

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 541 SPAISATSTRSSNPRIPYTNHPRLNIHFHQSPXTP 645
           SP++SA +T +SN   P  ++  +   FH+S  +P
Sbjct: 805 SPSVSAIATTNSNSNAPPVHYANVTSTFHESQDSP 839


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 233  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 358
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 233  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 358
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,560,616
Number of Sequences: 53049
Number of extensions: 756225
Number of successful extensions: 2289
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2284
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)