Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P10
(821 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 34 0.12
02_01_0302 - 2021221-2023305 33 0.21
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 33 0.36
07_01_0373 + 2783596-2784933 31 0.84
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 31 1.1
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 30 2.6
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850... 29 3.4
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 29 3.4
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 3.4
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 29 3.4
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 29 4.5
02_05_0814 - 31970558-31971126,31971242-31971413 29 4.5
11_06_0610 - 25449085-25453284 29 5.9
04_01_0041 - 464695-464850,467485-469029 29 5.9
01_05_0227 - 19512866-19514983 29 5.9
12_01_0411 + 3276679-3276687,3277430-3277493,3278256-3278297,327... 28 7.8
03_05_0824 + 27980191-27980243,27980633-27980671,27980974-279820... 28 7.8
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 7.8
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +1
Query: 526 ASSHPPLAISATSTRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAPS 702
A+ PPLA+ AT+T + P P +P P++P P P + PP+ S APS
Sbjct: 22 AAGTPPLAVPATNTPPNPATTPTPLTPNP-NPSPTLPPPPM--STPPVVAPPMHSFAPS 77
>02_01_0302 - 2021221-2023305
Length = 694
Score = 33.5 bits (73), Expect = 0.21
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Frame = +1
Query: 466 SQCAG---HPFILSHYYWRSRPYASSHPPLAISATSTRSSNPRIPYTNHPRT*HPFPSIP 636
SQCA HPF S +++ A+S+ P + P P ++ PR P+P P
Sbjct: 363 SQCAAAAAHPFDCS----KAQCQAASYTPTPGGSPGRGGQGPPAPVSSPPRRRGPYPQPP 418
Query: 637 X---TPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPP 753
TP + P S PS PSS SPP
Sbjct: 419 SSSPTPSYPSPSSSYPAPPGSNTPSYPSPPSSATTPSSHSPP 460
>06_01_1069 +
8731567-8731632,8732120-8732281,8733028-8733081,
8733557-8733630,8733706-8733786,8734902-8735079,
8735336-8735506,8736113-8736202,8736284-8736331,
8736447-8736562,8736655-8736733,8737101-8737223
Length = 413
Score = 32.7 bits (71), Expect = 0.36
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 SRPYASSHPPLAISATSTRSSNPRIPYTNHPRT*HPFPSIPX-TPY*KEFAPGLKPPLSS 690
S+ ASS S S P P + RT P P P TP + P +PP++S
Sbjct: 75 SKAKASSSGASTASKAPVSQSQPATPVASVART--PPPQAPVVTP--EPAPPSAQPPVAS 130
Query: 691 EAPSAYLTPSSLGMAKGVSPPYFQ 762
P+A TP++ A + Y Q
Sbjct: 131 ATPAAAATPAAAVTASSDADVYSQ 154
>07_01_0373 + 2783596-2784933
Length = 445
Score = 31.5 bits (68), Expect = 0.84
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -1
Query: 92 EEEKALTKEGMAEAAETXKGTISSMNRS 9
E+++ LTK G + +ET KG++ S++RS
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRS 178
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +1
Query: 520 PYASSHPPLAISATSTRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAP 699
P S +PP A+ T T + P + P TP ++A +PP +S P
Sbjct: 316 PQESYYPPSAVQPTDTTHQQYQAPPAPQSQAPPAPPQHYQTP--PQYAQYSQPPPASANP 373
Query: 700 SAYLTPSSLGMAKGVSPPY 756
S + PS + V+ PY
Sbjct: 374 STAVPPSVHQQPEEVAAPY 392
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 PYASSHPPLAISATSTRSSNP-RIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEA 696
P A + P + + S P +P + P P P P P APG P S
Sbjct: 124 PGAPNVPTMPQTGAPPGSMPPGSMPPGSMPMQMAPLPRPPTLPPPTSGAPGAPIPNSGAP 183
Query: 697 PSAYLT--PSSLGMAKGVSPP 753
P+ Y T P G G PP
Sbjct: 184 PAMYQTNPPQPAGPTSGAPPP 204
>10_05_0043 +
8503979-8504407,8506484-8506624,8506865-8506975,
8507746-8508330
Length = 421
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +1
Query: 526 ASSHPPLAISATSTRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAPSA 705
A+SH A +A +++P P+ HP +P+P P AP +P ++ +
Sbjct: 6 AASH---AAAAGPPPAADPHHPHYPHPYAGYPYPYAAYNP----AAPASEPATAASSSYY 58
Query: 706 YLTPSSLGMAKGVSPPY 756
Y T S + G PY
Sbjct: 59 YPTAVSAAASAGQYDPY 75
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = +1
Query: 517 RPYASSHPPLAISATSTRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEA 696
RP+ + P A + + P+ P+T+ P + PF + P P F G PP S+
Sbjct: 79 RPFGAGPPQQGPFAAA--APPPQGPFTSAPSSQGPFAAAPQPPSQGPF--GTAPP-PSQG 133
Query: 697 PSAYLTPSSLGMAKGVSPP 753
P P S G G +PP
Sbjct: 134 PFGTAPPPSQG-PFGTAPP 151
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/90 (25%), Positives = 32/90 (35%)
Frame = +1
Query: 538 PPLAISATSTRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSEAPSAYLTP 717
P L T ++ P P P P P P P PP+ AP
Sbjct: 332 PTLVTGGTQENNATSDAPKLMPPPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPPK 391
Query: 718 SSLGMAKGVSPPYFQVNDESQASRLISRHS 807
+++ +SP ++ES AS L S S
Sbjct: 392 ATMARFPKLSPTESSRSEESSASELASESS 421
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 284 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL--KIPVTVDLCWTTADVT 457
TE +N V V L SS GY D + ++ V + K+ V +D TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224
Query: 458 VEGVNVLATPSSSRITIGGLALMHQ 532
+ +N+L P G L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 29.1 bits (62), Expect = 4.5
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 517 RPYASSHPPLAISATSTRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPG----LKPPL 684
R SS P+ +S S RS + P + R+ PF P TP + P L PP
Sbjct: 145 RSSRSSASPIRLSP-SPRSMSRTRPSSAASRSSPPFALQPPTPSWRPSTPPSAKTLTPPR 203
Query: 685 SSEAPSAYLTP 717
S +P++ LTP
Sbjct: 204 RSPSPASTLTP 214
>02_05_0814 - 31970558-31971126,31971242-31971413
Length = 246
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = +1
Query: 514 SRPYASSHPPLAISATSTRSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLSSE 693
S P + S P ST + P PY + P P+PS P T + P S
Sbjct: 142 STPSSPSSPTPTTPNPSTPT--PTTPYPSTPMPTTPYPSTPMTTPTTPYTTPTSPACSGG 199
Query: 694 APSAYLTPSSLG 729
A + +TP + G
Sbjct: 200 AGATPVTPVTPG 211
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Frame = +1
Query: 520 PYASSHPPLAISATST----RSSNPRIPYTNHPRT*HPFPSIPXTPY*KEFAPGLKPPLS 687
P SS PP +S SS P + + P P P T P + PP
Sbjct: 835 PVKSSSPPPEAHVSSPPPEKSSSPPPEAHVSSPPPPEKSPPPPETKSPPTLTPEISPPPE 894
Query: 688 SEAPSAYLTPSSLGMAKGVSPP 753
++P ++ SS +K PP
Sbjct: 895 GKSPPSHTPESSSPPSKESEPP 916
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 245 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPV 421
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 422 TVD 430
+D
Sbjct: 100 PLD 102
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 462 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 370
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>12_01_0411 +
3276679-3276687,3277430-3277493,3278256-3278297,
3279047-3279063,3280011-3281258
Length = 459
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 264 CTSILLAPKPNRTVSL-CNHCRT 329
CT ILLAP+P +T + N CR+
Sbjct: 55 CTDILLAPRPRKTKRIDINSCRS 77
>03_05_0824 +
27980191-27980243,27980633-27980671,27980974-27982023,
27983097-27983262,27983439-27983549,27983637-27983688,
27984691-27984859,27985604-27985883
Length = 639
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +2
Query: 401 PSLKIPVTVDL--CWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSR--LHQP 568
P KIP +++ C T+ D T ++ S+ +ITIG L L+ + WR R LH+P
Sbjct: 220 PGSKIPCNLEVSDCLTSHDGTSA-----SSSSNEKITIGLLFLLQKLCKNWRLRRFLHRP 274
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +2
Query: 236 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
Q I + ++ L N TV + N + GY+ +N+ + PSLK
Sbjct: 198 QVFCIVLEMFFYQLLQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLK- 256
Query: 416 PVTVDLCWTTADVTVEGVNVLATPSS 493
D C T ++ +EG++ L S+
Sbjct: 257 ----DFCEPTVEM-LEGMSALKALST 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,549,529
Number of Sequences: 37544
Number of extensions: 502805
Number of successful extensions: 1549
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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