Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P09
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 179 2e-45
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 179 2e-45
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 179 2e-45
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 179 2e-45
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 140 9e-34
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 140 9e-34
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 132 4e-31
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 132 4e-31
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 28 9.8
Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 28 9.8
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 28 9.8
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 28 9.8
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 179 bits (436), Expect = 2e-45
Identities = 93/184 (50%), Positives = 115/184 (62%)
Frame = +1
Query: 307 YIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFK 486
Y++TP G RAL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF
Sbjct: 92 YVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
Query: 487 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPXRFCV 666
K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREHLEK + V
Sbjct: 152 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD-TV 210
Query: 667 XPXMK*LTALVSPRAXDTXGVTSRXAHKKXYPVRXTXXLXKXCLXLXXXHPSRGSFTVPR 846
+ + + R GVTSR H K P R T + + HPSR +FTV R
Sbjct: 211 FAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLP-RKTHKGLRKVACIGAWHPSRVAFTVAR 268
Query: 847 AG*K 858
AG K
Sbjct: 269 AGQK 272
Score = 140 bits (340), Expect = 9e-34
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPP 281
K+NKKE+VEAVTI+ETPP
Sbjct: 66 KVNKKEVVEAVTIVETPP 83
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 179 bits (436), Expect = 2e-45
Identities = 93/184 (50%), Positives = 115/184 (62%)
Frame = +1
Query: 307 YIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFK 486
Y++TP G RAL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF
Sbjct: 92 YVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
Query: 487 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPXRFCV 666
K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREHLEK + V
Sbjct: 152 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD-TV 210
Query: 667 XPXMK*LTALVSPRAXDTXGVTSRXAHKKXYPVRXTXXLXKXCLXLXXXHPSRGSFTVPR 846
+ + + R GVTSR H K P R T + + HPSR +FTV R
Sbjct: 211 FAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLP-RKTHKGLRKVACIGAWHPSRVAFTVAR 268
Query: 847 AG*K 858
AG K
Sbjct: 269 AGQK 272
Score = 140 bits (340), Expect = 9e-34
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPP 281
K+NKKE+VEAVTI+ETPP
Sbjct: 66 KVNKKEVVEAVTIVETPP 83
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 179 bits (436), Expect = 2e-45
Identities = 93/184 (50%), Positives = 115/184 (62%)
Frame = +1
Query: 307 YIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFK 486
Y++TP G RAL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF
Sbjct: 92 YVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
Query: 487 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPXRFCV 666
K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREHLEK + V
Sbjct: 152 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD-TV 210
Query: 667 XPXMK*LTALVSPRAXDTXGVTSRXAHKKXYPVRXTXXLXKXCLXLXXXHPSRGSFTVPR 846
+ + + R GVTSR H K P R T + + HPSR +FTV R
Sbjct: 211 FAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLP-RKTHKGLRKVACIGAWHPSRVAFTVAR 268
Query: 847 AG*K 858
AG K
Sbjct: 269 AGQK 272
Score = 140 bits (340), Expect = 9e-34
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPP 281
K+NKKE+VEAVTI+ETPP
Sbjct: 66 KVNKKEVVEAVTIVETPP 83
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 179 bits (436), Expect = 2e-45
Identities = 93/184 (50%), Positives = 115/184 (62%)
Frame = +1
Query: 307 YIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFK 486
Y++TP G RAL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF
Sbjct: 92 YVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
Query: 487 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPXRFCV 666
K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREHLEK + V
Sbjct: 152 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD-TV 210
Query: 667 XPXMK*LTALVSPRAXDTXGVTSRXAHKKXYPVRXTXXLXKXCLXLXXXHPSRGSFTVPR 846
+ + + R GVTSR H K P R T + + HPSR +FTV R
Sbjct: 211 FAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLP-RKTHKGLRKVACIGAWHPSRVAFTVAR 268
Query: 847 AG*K 858
AG K
Sbjct: 269 AGQK 272
Score = 140 bits (340), Expect = 9e-34
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPP 281
K+NKKE+VEAVTI+ETPP
Sbjct: 66 KVNKKEVVEAVTIVETPP 83
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 140 bits (340), Expect = 9e-34
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPP 281
K+NKKE+VEAVTI+ETPP
Sbjct: 66 KVNKKEVVEAVTIVETPP 83
Score = 99 bits (238), Expect = 2e-21
Identities = 43/77 (55%), Positives = 52/77 (67%)
Frame = +1
Query: 307 YIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFK 486
Y++TP G RAL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF
Sbjct: 92 YVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
Query: 487 KMIRYCSVVRVIAHTQM 537
K+ +YCS +RVIAHTQM
Sbjct: 152 KLKKYCSSIRVIAHTQM 168
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +3
Query: 645 YPXSILCXAQXEMIDCIGVTKGXGYKXCHFSXGTQKXLPRKXHXG 779
Y SI A +MID IGVT+G G+K T+K LPRK H G
Sbjct: 156 YCSSIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKK-LPRKTHKG 199
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +1
Query: 724 GVTSRXAHKKXYPVRXTXXLXKXCLXLXXXHPSRGSFTVPRAG*K 858
GVTSR H K P + L K + HPSR +FTV RAG K
Sbjct: 182 GVTSRW-HTKKLPRKTHKGLRKVAC-IGAWHPSRVAFTVARAGQK 224
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 140 bits (340), Expect = 9e-34
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 228 KINKKEIVEAVTIIETPP 281
K+NKKE+VEAVTI+ETPP
Sbjct: 66 KVNKKEVVEAVTIVETPP 83
Score = 99 bits (238), Expect = 2e-21
Identities = 43/77 (55%), Positives = 52/77 (67%)
Frame = +1
Query: 307 YIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFK 486
Y++TP G RAL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF
Sbjct: 92 YVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
Query: 487 KMIRYCSVVRVIAHTQM 537
K+ +YCS +RVIAHTQM
Sbjct: 152 KLKKYCSSIRVIAHTQM 168
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +3
Query: 645 YPXSILCXAQXEMIDCIGVTKGXGYKXCHFSXGTQKXLPRKXHXG 779
Y SI A +MID IGVT+G G+K T+K LPRK H G
Sbjct: 156 YCSSIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKK-LPRKTHKG 199
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +1
Query: 724 GVTSRXAHKKXYPVRXTXXLXKXCLXLXXXHPSRGSFTVPRAG*K 858
GVTSR H K P + L K + HPSR +FTV RAG K
Sbjct: 182 GVTSRW-HTKKLPRKTHKGLRKVAC-IGAWHPSRVAFTVARAGQK 224
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 132 bits (318), Expect = 4e-31
Identities = 72/139 (51%), Positives = 89/139 (64%)
Frame = +1
Query: 442 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 621
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 622 AREHLEKPIPXRFCVXPXMK*LTALVSPRAXDTXGVTSRXAHKKXYPVRXTXXLXKXCLX 801
AREHLEK + V + + + R GVTSR H K P R T +
Sbjct: 99 AREHLEKQVQVD-TVFAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLP-RKTHKGLRKVAC 155
Query: 802 LXXXHPSRGSFTVPRAG*K 858
+ HPSR +FTV RAG K
Sbjct: 156 IGAWHPSRVAFTVARAGQK 174
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 134
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 132 bits (318), Expect = 4e-31
Identities = 72/139 (51%), Positives = 89/139 (64%)
Frame = +1
Query: 442 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 621
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 622 AREHLEKPIPXRFCVXPXMK*LTALVSPRAXDTXGVTSRXAHKKXYPVRXTXXLXKXCLX 801
AREHLEK + V + + + R GVTSR H K P R T +
Sbjct: 99 AREHLEKQVQVD-TVFAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLP-RKTHKGLRKVAC 155
Query: 802 LXXXHPSRGSFTVPRAG*K 858
+ HPSR +FTV RAG K
Sbjct: 156 IGAWHPSRVAFTVARAGQK 174
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 48 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 134
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 260 HHHRDSSXWFVSVLLDTLRPLMD 328
HHH+ W SV+ D R L+D
Sbjct: 19 HHHKPKKSWVRSVMSDVKRSLLD 41
>Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 260 HHHRDSSXWFVSVLLDTLRPLMD 328
HHH+ W SV+ D R L+D
Sbjct: 19 HHHKPKKSWVRSVMSDVKRSLLD 41
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 260 HHHRDSSXWFVSVLLDTLRPLMD 328
HHH+ W SV+ D R L+D
Sbjct: 19 HHHKPKKSWVRSVMSDVKRSLLD 41
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 260 HHHRDSSXWFVSVLLDTLRPLMD 328
HHH+ W SV+ D R L+D
Sbjct: 19 HHHKPKKSWVRSVMSDVKRSLLD 41
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 557 KRRLTLWKSNLTVVPSRTK*NGPENIWRNLSLXDS 661
K RL L K +V S K GP+ W N+ L ++
Sbjct: 473 KNRLNLSKEEKELVSSYMKNQGPQKKWENMPLHET 507
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 260 HHHRDSSXWFVSVLLDTLRPLMD 328
HHH+ W SV+ D R L+D
Sbjct: 19 HHHKPKKSWVRSVMSDVKRSLLD 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,671,988
Number of Sequences: 27780
Number of extensions: 379168
Number of successful extensions: 915
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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