Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P08
(867 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 43 4e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 43 4e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 41 2e-05
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 40 2e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 40 3e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 40 4e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 39 5e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 38 9e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 38 2e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 36 5e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 6e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.001
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 32 0.006
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.6
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 22 6.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 8.4
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 8.4
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 44.8 bits (101), Expect = 1e-06
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Frame = +2
Query: 233 LRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTXGDXALRXR- 406
+ + + + + W D L+W ++ G + V S+ +W PD+ + N+ T +
Sbjct: 89 MELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTT 148
Query: 407 --VSXNGSVS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGSXMXXSDEMXXVID 562
V +GSVS + + +WP D C GS + +E+ +D
Sbjct: 149 CLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLD 202
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 2e-06
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = +2
Query: 233 LRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTXGDXALRXR 406
L A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G
Sbjct: 101 LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVV 160
Query: 407 VSXNGSVS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGSXMXXSDEMXXVI 559
V+ NGS + + + +P D C GS +++ V+
Sbjct: 161 VTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 2e-06
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = +2
Query: 233 LRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTXGDXALRXR 406
L A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G
Sbjct: 101 LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVV 160
Query: 407 VSXNGSVS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGSXMXXSDEMXXVI 559
V+ NGS + + + +P D C GS +++ V+
Sbjct: 161 VTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = +2
Query: 233 LRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTXGDXALRXR 406
L A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVV 92
Query: 407 VSXNGSVS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGSXMXXSDEMXXVI 559
V+ NGS + + + +P D C GS +++ V+
Sbjct: 93 VTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 42.7 bits (96), Expect = 4e-06
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = +2
Query: 233 LRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTXGDXALRXR 406
L A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVV 92
Query: 407 VSXNGSVS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGSXMXXSDEMXXVI 559
V+ +GS + + M +P D C GS +++ V+
Sbjct: 93 VTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 42.7 bits (96), Expect = 4e-06
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = +2
Query: 233 LRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTXGDXALRXR 406
L A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVV 92
Query: 407 VSXNGSVS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGSXMXXSDEMXXVI 559
V+ +GS + + M +P D C GS +++ V+
Sbjct: 93 VTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 42.7 bits (96), Expect = 4e-06
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +2
Query: 251 LQMNWIDKRLTWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTXGDXALRXRVSXNGS 424
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A + ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 425 VS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGS 523
V + + + +P D TC GS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 233 LRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 370
L A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 233 LRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 370
L A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 233 LRIQADLQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 370
L A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 33 LTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.5 bits (93), Expect = 1e-05
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 251 LQMNWIDKRLTWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTXGDXALRXRVSXNGS 424
++ +W D +L W E+G L V S+ +WRPD+VL NA A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 425 VS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGS 523
V + + + +P D TC GS
Sbjct: 141 VEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGS 173
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 40.7 bits (91), Expect = 2e-05
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 251 LQMNWIDKRLTWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTXGDXALRXRVSXNGS 424
++ +W D +L W E+G L V S+ +WRPD+VL NA + V +G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGL 140
Query: 425 VS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGS 523
V + + + +P D+ TC GS
Sbjct: 141 VVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGS 173
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 40.3 bits (90), Expect = 2e-05
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +2
Query: 251 LQMNWIDKRLTWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDXALRXRV-SXNGS 424
L+ W D + W+ E+G T L V SE +W PD+VL N A G + + G
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGK 132
Query: 425 VS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGS 523
V + + +P D TC GS
Sbjct: 133 VLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 39.9 bits (89), Expect = 3e-05
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +2
Query: 251 LQMNWIDKRLTWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTXGDXALRXR----VSX 415
L+ W D +L W+ ++G + +++W+PD+VL N A G+ +R + +
Sbjct: 79 LRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYP 135
Query: 416 NGSVS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGSXMXXSDEM 547
NG V + + + +P D TC GS D++
Sbjct: 136 NGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQV 179
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 39.5 bits (88), Expect = 4e-05
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 251 LQMNWIDKRLTWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTXGDXALRXRVSXNGS 424
++ W D +L WN E+G L V SE +W PD+VL NA + + G
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGD 145
Query: 425 VS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGS 523
VS + + + +P D +C GS
Sbjct: 146 VSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGS 178
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 39.1 bits (87), Expect = 5e-05
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 251 LQMNWIDKRLTWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 370
++ W D +L WN ++G T V SE +W PD+VL N A
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 38.3 bits (85), Expect = 9e-05
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Frame = +2
Query: 263 WIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTXGDXALRXR--VSXNGSVS* 433
W D L WNA E+ G V R+WRPD +L N A + VS G V
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
Query: 434 IKRLDXSTPXXMXXDTWPXDMXTCTYXXGS 523
+ + + + +P D C S
Sbjct: 122 LSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.5 bits (83), Expect = 2e-04
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 251 LQMNWIDKRLTWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 370
L++ W D + WN ++G L + RLW+PDV++ N+A
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 35.9 bits (79), Expect = 5e-04
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = +2
Query: 254 QMNWIDKRLTWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TXGDXALRXRVSXNGS 424
+ +W+D+RL + G+ + + R+W+PD N + T R+ +G
Sbjct: 58 RQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGR 117
Query: 425 VS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGS 523
V RL M + +P D C GS
Sbjct: 118 VLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 35.5 bits (78), Expect = 6e-04
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +2
Query: 251 LQMNWIDKRLTWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTXGDXALRXRVSXNG 421
L++ W LTW + E+ ++ V S +W PD+V+ + + ++ V +G
Sbjct: 86 LKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSG 145
Query: 422 SVS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGSXMXXSDEM 547
++ + + WP D+ CT S S+E+
Sbjct: 146 TILCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Frame = +2
Query: 239 IQADLQMNWIDKRLTWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDXALRX--- 403
+Q + W+D+RL +N G T L + R+W PD+ N + +
Sbjct: 82 VQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYI 140
Query: 404 RVSXNGSVS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGSXMXXSDEM 547
R+ NGSV R+ + M +P D C+ S +D++
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Frame = +2
Query: 239 IQADLQMNWIDKRLTWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDXALRX--- 403
+Q + W+D+RL +N G T L + R+W PD+ N + +
Sbjct: 82 VQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYI 140
Query: 404 RVSXNGSVS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGSXMXXSDEM 547
R+ NGSV R+ + M +P D C+ S +D++
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.001
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Frame = +2
Query: 254 QMNWIDKRLTWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TXGDXALRXRVSXNGS 424
+ +W D RL++ S + ER+WRPD N + T R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 425 VS*IKRLDXSTPXXMXXDTWPXDMXTCTYXXGS 523
+ RL M +P D +C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.006
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 LQMNWIDKRLTWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDXALRX---RVSXNG 421
L W D+RL ++ E + +E++W PD N + D R R+S +G
Sbjct: 88 LNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDG 147
Query: 422 SVS*IKRLDXSTPXXMXXDTWPXDMXTCT 508
SV+ R + M +P D CT
Sbjct: 148 SVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 316 PSAAAPLPCVPSQS 275
PSA AP+P +P+ S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 22.2 bits (45), Expect = 6.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 34 YYSALPFLLTCAIARCEQNAKNATS 108
Y+SA+ FLL + ++ ++ KN S
Sbjct: 5 YFSAILFLLAISDSQAQEKLKNIYS 29
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.8 bits (44), Expect = 8.4
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Frame = +2
Query: 329 ERLWRPDVVLLNAAATTXGDXALRXR---VSXNGSVS*IKRLDXSTPXXMXXDTWPXDMX 499
+ +WRPD NA + T + + + ++ + +L M +P D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 500 TCTYXXGSXMXXSDEM 547
C S +DEM
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.8 bits (44), Expect = 8.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 323 TPAKCCSPTPLRSKSVVCRSNSFED 249
TP + + PL ++ V CR+N E+
Sbjct: 26 TPRRKKNKKPLPTECVFCRNNGEEE 50
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,464
Number of Sequences: 438
Number of extensions: 3297
Number of successful extensions: 48
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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