Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P07
(974 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.19
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.19
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.19
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 27 0.19
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 26 0.59
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 26 0.59
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.59
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.78
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 1.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 1.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 1.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 1.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 1.8
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 7.3
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 7.3
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 9.7
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 9.7
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.19
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.19
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.5 bits (58), Expect = 0.19
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
V S+ +WRPD+VL N A
Sbjct: 101 VPSDHIWRPDIVLYNNA 117
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.5 bits (58), Expect = 0.19
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 401 GCXTWLVSSERLWRPDVVLLNAA 469
G T V SE +W PD+VL N A
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA 113
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 25.8 bits (54), Expect = 0.59
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 277 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 390
++ L ++H N+ E TV L++ W L+W +
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKS 99
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 25.8 bits (54), Expect = 0.59
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
V SE +W PD+VL N A
Sbjct: 97 VPSEHIWLPDIVLYNNA 113
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 25.8 bits (54), Expect = 0.59
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
V SE +W PD+VL N A
Sbjct: 110 VPSENIWLPDIVLYNNA 126
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.4 bits (53), Expect = 0.78
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
+ RLW+PDV++ N+A
Sbjct: 100 IPPHRLWKPDVLMYNSA 116
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 1.0
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 135 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 239
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 1.0
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 220 STRSSQRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGXM 399
S + +R + + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 400 G 402
G
Sbjct: 124 G 124
Score = 24.6 bits (51), Expect = 1.4
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 1.0
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 220 STRSSQRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGXM 399
S + +R + + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 400 G 402
G
Sbjct: 124 G 124
Score = 24.6 bits (51), Expect = 1.4
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 307 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 402
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.4
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 307 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 402
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.4
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 307 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 402
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.4
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 307 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 402
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.4
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 307 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 402
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.4
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 307 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 402
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.4
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 24.2 bits (50), Expect = 1.8
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 428 ERLWRPDVVLLNAA 469
+++W+PD+VL N A
Sbjct: 106 DKVWKPDIVLFNNA 119
Score = 22.6 bits (46), Expect = 5.5
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 268 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGXMG 402
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 419 VSSERLWRPDVVLLNAA 469
V R+WRPD +L N A
Sbjct: 82 VPYNRVWRPDTILYNNA 98
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 7.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 428 ERLWRPDVVLLN 463
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.2 bits (45), Expect = 7.3
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 310 IRESESTVRILADLQMNWIDKRLSWNAG 393
I E + T + + +W+D+RL++ G
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGG 71
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.8 bits (44), Expect = 9.7
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2
Query: 434 LWRPDVVLLNAAATTAGDYAXP 499
+WRPD NA T + + P
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIP 108
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.8 bits (44), Expect = 9.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 61 PRQLCKQLLEVNSFNRSVVIKCRR 132
PR+ CK +LE R+ +I +R
Sbjct: 466 PRKRCKMILESMEIERNGLIASQR 489
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,834
Number of Sequences: 438
Number of extensions: 4068
Number of successful extensions: 37
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32169774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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