Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_P01
(841 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 38 0.010
09_02_0546 - 10454404-10455687 34 0.12
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296 34 0.16
10_02_0188 - 6473353-6473432,6473619-6474816 32 0.49
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 31 0.86
05_03_0201 - 9762563-9762843,9763037-9763919,9763988-9764036,980... 31 1.5
01_06_1539 + 38107108-38109649,38110563-38110915 30 2.0
02_01_0158 - 1103461-1104186 28 2.0
08_02_0701 + 20177860-20178603 30 2.6
08_01_0438 + 3852221-3853207,3853544-3854757,3855258-3855330,385... 30 2.6
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 30 2.6
12_02_0541 + 20162313-20162374,20162670-20163419,20164627-201648... 29 3.5
04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903 29 3.5
03_06_0587 - 34921535-34922041,34922579-34922689 29 3.5
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 29 3.5
10_08_0029 + 14270945-14271364,14271449-14272486 29 4.6
10_05_0023 + 8171023-8171782,8172658-8172950 29 4.6
07_03_0964 - 22989470-22989618,22989729-22990476 29 4.6
04_04_0452 + 25342306-25342552,25342658-25342785,25342868-253431... 29 4.6
02_05_0943 + 32976990-32976996,32977119-32977464,32977586-329777... 29 4.6
02_03_0003 + 13697552-13697861,13698144-13698262 29 4.6
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 29 4.6
01_05_0320 - 20874691-20875230,20879337-20879590,20880014-208810... 29 4.6
01_01_1137 + 9017211-9018584 29 4.6
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 25 5.6
05_04_0389 - 20845490-20845600,20845697-20846006,20846097-208462... 28 8.1
>05_01_0112 -
757514-758444,758525-758571,759074-759236,759861-760366
Length = 548
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = -3
Query: 299 CHFCGKPGHRAEGCCDRYCSQTFFDIPAKPEQPPHPWAPGSRLQVSCYVCGDASHVASGC 120
C+ CG PGH + C ++ S+ D + + S+ + +CY CG H++S C
Sbjct: 366 CYECGTPGHISSSCPNKKASEAISD---EKKANVDSVTASSKKRRTCYECGIPGHLSSAC 422
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 15/78 (19%)
Frame = -3
Query: 308 RGSCHFCGKPGHRAEGCCDRYCSQTF---------FDIPA------KPEQPPHPWAPGSR 174
R C+ CG PGH + C ++ + IP+ K +P +
Sbjct: 466 RRKCYECGIPGHLSSACPNKVAAVNSDMEKSYGGSSTIPSATSDGNKASDDTNPVPAKKK 525
Query: 173 LQVSCYVCGDASHVASGC 120
+ +CY CG A H+AS C
Sbjct: 526 KRRTCYECGIAGHLASEC 543
>09_02_0546 - 10454404-10455687
Length = 427
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = -3
Query: 335 NQNALEVFFRGSCHFCGKPGHRAEGCCDRYCSQTFFDIPAKPEQPPHPWAPGSRLQVSCY 156
NQN +E+ +C CG+ GH A C C + + + PP P SR ++C+
Sbjct: 194 NQNKIEL---KACSRCGEIGHVASSCAST-C------VHCEEDHPPDR-CPTSR--ITCF 240
Query: 155 VCGDASHVASGCSMRF 108
C HV C F
Sbjct: 241 FCEGTDHVPKDCQFSF 256
>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
Length = 247
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = -3
Query: 299 CHFCGKPGHRAEGCCDRYCSQTFFDIPAKPEQPPHPWAPGSRLQVSCYVCGDASHVASGC 120
CH CG PGH A C + D+ ++P H A + C CG + H+A C
Sbjct: 60 CHACGLPGHIAAECSSK-------DLCWNCKEPGH-MANSCPNEGICRNCGKSGHIAREC 111
Query: 119 S 117
S
Sbjct: 112 S 112
>10_02_0188 - 6473353-6473432,6473619-6474816
Length = 425
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = -3
Query: 308 RGSCHFCGKPGHRAEGCCDRYCSQTFFDIPAKPEQPPHPWAPGSRLQVSCYVCGDASHVA 129
R +C CG+ GH A C C + + + PP P SR ++C+ C HV
Sbjct: 190 RKACSRCGEIGHVASSCAT-IC------VHCEEDHPPDR-CPTSR--ITCFFCEGTDHVP 239
Query: 128 SGCSMRF 108
C F
Sbjct: 240 KDCQFSF 246
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 200 PHPWAPGSRLQVSCYVCGDASHVASGCSM 114
P + PG L +C+ CG+ HVA C M
Sbjct: 166 PRYFDPGETLLETCFNCGEEGHVAVNCPM 194
>05_03_0201 -
9762563-9762843,9763037-9763919,9763988-9764036,
9806710-9807680
Length = 727
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 308 RGSCHFCGKPGHRAEGCCDRYCSQTFFDIPAKPEQPPHPWAPGSRLQVSCYVCGDASHVA 129
R +C CG+ GH A C C E P P SR ++C+ C HV
Sbjct: 190 RKACSRCGEIGHVASSCATT-CVHC-------EEDHPSDRCPTSR--ITCFFCEGTDHVP 239
Query: 128 SGCSMRF 108
C F
Sbjct: 240 KDCQFSF 246
>01_06_1539 + 38107108-38109649,38110563-38110915
Length = 964
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 277 GIVPKGVATDTALKLFSIFQQNLNNLLIRGL 185
GI+PK +A LK+F I++ N + +L GL
Sbjct: 274 GILPKEIANLKKLKIFHIYRNNFSGVLPEGL 304
>02_01_0158 - 1103461-1104186
Length = 241
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 164 SCYVCGDASHVASGC 120
SCY CG+A H+A C
Sbjct: 225 SCYNCGEAGHIARDC 239
Score = 24.6 bits (51), Expect(2) = 5.7
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 305 GSCHFCGKPGHRAEGC 258
G C CG+ GH A C
Sbjct: 124 GGCFKCGESGHMARDC 139
Score = 24.6 bits (51), Expect(2) = 2.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 164 SCYVCGDASHVASGC 120
+CY CG+ H+A C
Sbjct: 192 ACYNCGETGHLARDC 206
Score = 24.2 bits (50), Expect(2) = 2.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 305 GSCHFCGKPGHRAEGC 258
G C CG+ GH A C
Sbjct: 159 GGCFKCGEMGHMARDC 174
Score = 22.6 bits (46), Expect(2) = 5.7
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -3
Query: 161 CYVCGDASHVASGC 120
C+ CG+ H+A C
Sbjct: 161 CFKCGEMGHMARDC 174
>08_02_0701 + 20177860-20178603
Length = 247
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 308 RGSCHFCGKPGHRAEGC 258
RG C+ CG+PGH A C
Sbjct: 229 RGPCYNCGEPGHIARDC 245
>08_01_0438 +
3852221-3853207,3853544-3854757,3855258-3855330,
3856715-3856843,3857060-3857103,3857186-3857265,
3857342-3857396,3857712-3857919
Length = 929
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 213 FCWNIEKSLRAVSVATPFGTMPRFSAEMAASTEK 314
F W EK L A+ V P + F+ EMAA+ K
Sbjct: 346 FAWLFEKWLEAMPVGPPVSLVLEFNQEMAAAATK 379
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 545 SPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEAXREHL 706
S PAT + + P +LLT+ TSH + N T S SH + + RE L
Sbjct: 685 SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTTSSHQDASFRESL 737
>12_02_0541 +
20162313-20162374,20162670-20163419,20164627-20164820,
20165001-20165074,20165094-20165114
Length = 366
Score = 29.5 bits (63), Expect = 3.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 185 PGSRLQVSCYVCGDASHVASGC 120
PG++ V C+ CG+ H A+ C
Sbjct: 287 PGAKKNVDCFNCGEYGHYANNC 308
>04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903
Length = 405
Score = 29.5 bits (63), Expect = 3.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 308 RGSCHFCGKPGHRAEGCC 255
+ C +CGK GH A+ CC
Sbjct: 158 KDKCRYCGKLGHWAKDCC 175
>03_06_0587 - 34921535-34922041,34922579-34922689
Length = 205
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 305 GSCHFCGKPGHRAEGC 258
G C+ CGKPGH A C
Sbjct: 126 GDCYKCGKPGHFAREC 141
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 311 FRGSCHFCGKPGHRAEGC 258
F G+C CG+ GHRA C
Sbjct: 764 FSGACFNCGESGHRASDC 781
>10_08_0029 + 14270945-14271364,14271449-14272486
Length = 485
Score = 29.1 bits (62), Expect = 4.6
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Frame = -2
Query: 624 WLVRFVAVRSLHGGKMSCESAQVAGGETS---AVAAHPVRENRADRLDGTEAGRRVRQTT 454
WL F+A + GG+ S E Q GG+ + VAA RE + + A
Sbjct: 7 WLRSFLAGKKDGGGRRSGERQQHGGGDATPAVEVAAASTREKKRWSFRRSSASASAAAMG 66
Query: 453 RPRLQHGLPILEPPRSGCTCARAR-RLVGDLKRKNE 349
+P EP SG R R V DL+ +++
Sbjct: 67 KPAAVTAPSTPEPSVSGLASVSERARDVADLEGQSK 102
>10_05_0023 + 8171023-8171782,8172658-8172950
Length = 350
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -3
Query: 299 CHFCGKPGHRAEGCCDRYCSQT-FFDIPAKP--EQPPH 195
CH C +PGH A C Y +T F + + QPPH
Sbjct: 41 CHDCREPGHYALNCPWVYAKETPSFGLAGQTSLNQPPH 78
>07_03_0964 - 22989470-22989618,22989729-22990476
Length = 298
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 308 RGSCHFCGKPGHRAEGCCDR 249
+G C CGK GH A+ C +R
Sbjct: 211 KGDCFVCGKSGHWAKDCPER 230
>04_04_0452 +
25342306-25342552,25342658-25342785,25342868-25343110,
25344530-25344782,25344916-25345151
Length = 368
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 691 GFLSVRVTSCKRGGTRKIVVCVVAGKICCGKK-FAWW 584
GF++ +V C +G I +C A +C + +A+W
Sbjct: 291 GFVTAKVACCGQGPYNGIGLCTPASNVCANRDVYAYW 327
>02_05_0943 +
32976990-32976996,32977119-32977464,32977586-32977796,
32977997-32978072,32978175-32978277,32978601-32978669,
32978785-32978821,32978904-32978978,32979052-32979103,
32979188-32979232,32979342-32979442
Length = 373
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -2
Query: 537 AVAAHPVRENRADRL--DGTEAGRRVRQTTRPRLQHGLPILEPPRSGCTCARARRLV 373
A A P EN + ++ D GR +T P QH L E SGCTC R++
Sbjct: 108 AAATVPPFENISPKMLADSMTLGRDNGRTREPVDQHSL---EENHSGCTCVAVPRII 161
>02_03_0003 + 13697552-13697861,13698144-13698262
Length = 142
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 191 TDEEVVQVLLEYRK-KFESSICRNTLRHDAQVFRRNG 298
TD V ++ E + KFESS C+N +R A + NG
Sbjct: 4 TDTSVAHIMDEQQDIKFESSKCQNPIRPPATLLTSNG 40
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +2
Query: 620 SHHANYNFTGSTSLTRCYSHTEEAXREHLSSTHKHAL--HRKNLHP 751
S NY+ S +R H E R H S HKH L H K+L P
Sbjct: 725 SDEENYDSEESYKHSR-KKHRSEDSRAHTSDVHKHKLKRHSKDLEP 769
>01_05_0320 -
20874691-20875230,20879337-20879590,20880014-20881087,
20881259-20881511,20881548-20882369
Length = 980
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 308 RGSCHFCGKPGHRAEGCCDR 249
+G C CGK GH A+ C +R
Sbjct: 211 KGDCFVCGKSGHWAKDCPER 230
>01_01_1137 + 9017211-9018584
Length = 457
Score = 29.1 bits (62), Expect = 4.6
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -2
Query: 603 VRSLHGGKMSCESAQVAGGETSAVAAHPVREN-RADRLDGTEA--GRRVRQTTRPRLQHG 433
++ L G + + +VAGG V AHP+ E+ R R+ G A G TR G
Sbjct: 264 IKRLQSGIRARAAGKVAGGRVVRVEAHPIPEHPRPRRVVGRVALVGDAAGYVTR---CSG 320
Query: 432 LPILEPPRSGCTCARA 385
I RSG C RA
Sbjct: 321 EGIYFAARSGRLCGRA 336
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 25.4 bits (53), Expect(2) = 5.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 161 CYVCGDASHVASGCSMRFNFCSLRAIRRYKSY 66
CY CG+ H+ C S R +RR +SY
Sbjct: 126 CYRCGERGHIERNCQN-----SPRNLRRERSY 152
Score = 21.8 bits (44), Expect(2) = 5.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3
Query: 305 GSCHFCGKPGHRAEGC 258
G C CG GH A C
Sbjct: 102 GRCFNCGIDGHWARDC 117
>05_04_0389 -
20845490-20845600,20845697-20846006,20846097-20846242,
20846319-20846426,20846508-20846615,20846997-20847109,
20847340-20847437,20847530-20847714,20847811-20847953,
20848293-20848377,20848486-20848624,20848686-20848780,
20848894-20849037,20849114-20849206,20849310-20849376,
20849529-20849641,20849750-20849845,20853885-20854058
Length = 775
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 481 LRTVEAICPVLADWVGRDRGSLTSGYLCRLTRHFTTMQTSYRNKSYQPPRKLQFYGF 651
LR E I +A ++ R +GS S Y+ +F SY SY L Y F
Sbjct: 281 LRAPEDIAFAVALFIARKKGSFVSYYMYHGGTNFGRFAASYVTTSYYDGAPLDEYDF 337
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,697,702
Number of Sequences: 37544
Number of extensions: 451553
Number of successful extensions: 2032
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2023
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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