Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_O16
(843 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 286 2e-78
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 278 6e-76
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 242 5e-65
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 227 2e-60
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 188 1e-48
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 108 8e-25
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 72 9e-14
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 61 2e-10
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 33 0.067
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo... 30 0.47
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 28 1.4
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 28 1.9
SPAC23H3.02c |ini1||RING finger-like protein Ini1|Schizosaccharo... 27 2.5
SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase Agn2|Schizo... 27 3.3
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 27 3.3
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 27 4.4
SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|c... 27 4.4
SPAC1B3.09c |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 26 5.8
SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces pombe... 26 7.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 286 bits (702), Expect = 2e-78
Identities = 134/161 (83%), Positives = 148/161 (91%)
Frame = +3
Query: 243 YVAFTDTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGK 422
YVAFTDTERLIGDAAKNQVA+NP+NT+FDAKRLIGRKFDDP++Q DMKHWPFKVI+ GK
Sbjct: 39 YVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGK 98
Query: 423 PKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKD 602
P +Q+E+KGETK F PEEISSMVL KM+ETAEAYLG V DAVVTVPAYFNDSQRQATKD
Sbjct: 99 PVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKD 158
Query: 603 AGAIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLG 725
AG IAGLNVLRIINEPTAAA+AYGLD++ +GE NVLIFDLG
Sbjct: 159 AGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLG 199
Score = 57.2 bits (132), Expect = 3e-09
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 724 GGGTFDVSILTIDEGSLFEVKSTAGDPHLGGE 819
GGGTFDVS+LTI+EG +FEVK+TAGD HLGGE
Sbjct: 199 GGGTFDVSLLTIEEG-IFEVKATAGDTHLGGE 229
Score = 50.0 bits (114), Expect = 4e-07
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 137 AIGIDLGTTYSCVGVWQHGNVEIIANDQG 223
+IGIDLGTTYSCVG + + VEIIANDQG
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQG 32
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 278 bits (682), Expect = 6e-76
Identities = 131/161 (81%), Positives = 146/161 (90%)
Frame = +3
Query: 243 YVAFTDTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGK 422
YVAFTDTERLIGDAAKNQVA+NP+NT+FDAKRLIGR+F+DP++Q DMKHWPFKVI GK
Sbjct: 39 YVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGK 98
Query: 423 PKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKD 602
P IQ+EFKGETK F PEEISSMVL KM+E+AEA+LG V DAVVTVPAYFNDSQRQATKD
Sbjct: 99 PLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKD 158
Query: 603 AGAIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLG 725
AG IAGLNVLRIINEPTAAA+AYGLD++ + E NVLIFDLG
Sbjct: 159 AGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLG 199
Score = 57.2 bits (132), Expect = 3e-09
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 724 GGGTFDVSILTIDEGSLFEVKSTAGDPHLGGE 819
GGGTFDVS+LTI+EG +FEVK+TAGD HLGGE
Sbjct: 199 GGGTFDVSLLTIEEG-IFEVKATAGDTHLGGE 229
Score = 50.0 bits (114), Expect = 4e-07
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 137 AIGIDLGTTYSCVGVWQHGNVEIIANDQG 223
+IGIDLGTTYSCVG + + VEIIANDQG
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQG 32
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 242 bits (592), Expect = 5e-65
Identities = 113/161 (70%), Positives = 136/161 (84%)
Frame = +3
Query: 243 YVAFTDTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGK 422
+VAFT+TERL+GDAAKNQ A+NP NTVFDAKRLIGR+++DP+ Q+D+KHWPFKVI++ G
Sbjct: 43 FVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGI 102
Query: 423 PKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKD 602
P I++ + GE K+F +EIS+MVLTKMKE +EA L V AV+TVPAYF+DSQR ATKD
Sbjct: 103 PTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKD 162
Query: 603 AGAIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLG 725
AGAIAGLNVLRIINEPTAAA+AYGLD +NVLIFDLG
Sbjct: 163 AGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLG 203
Score = 55.6 bits (128), Expect = 8e-09
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 137 AIGIDLGTTYSCVGVWQHGNVEIIANDQG 223
AIGIDLGTTYSCV VW+ NVEII NDQG
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQG 36
Score = 49.6 bits (113), Expect = 5e-07
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +1
Query: 724 GGGTFDVSILTIDEGSLFEVKSTAGDPHLGGE 819
GGGTFDVS+L I +G +FEV +TAGD HLGGE
Sbjct: 203 GGGTFDVSLLKI-QGGVFEVLATAGDTHLGGE 233
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 227 bits (554), Expect = 2e-60
Identities = 102/161 (63%), Positives = 133/161 (82%)
Frame = +3
Query: 243 YVAFTDTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGK 422
YVAFT+ ERL+G+AAKNQ NP NT+FD KRLIGRKFD+ + +D+K +PF ++ND +
Sbjct: 72 YVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNR 131
Query: 423 PKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKD 602
P +++ G+ K+F PEEIS+M+L+KMK+TAEAYLG V AVVTVPAYFND+QRQATKD
Sbjct: 132 PLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKD 191
Query: 603 AGAIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLG 725
AG IAGLNV+RI+NEPTAAA+AYGLDK E++++++DLG
Sbjct: 192 AGTIAGLNVIRIVNEPTAAAIAYGLDKT-DTEKHIVVYDLG 231
Score = 52.0 bits (119), Expect = 1e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 140 IGIDLGTTYSCVGVWQHGNVEIIANDQG 223
IGIDLGTTYSCV V ++G VEIIANDQG
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQG 65
Score = 50.8 bits (116), Expect = 2e-07
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = +1
Query: 724 GGGTFDVSILTIDEGSLFEVKSTAGDPHLGGE 819
GGGTFDVS+L+ID G +FEV +T+GD HLGGE
Sbjct: 231 GGGTFDVSLLSIDNG-VFEVLATSGDTHLGGE 261
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 188 bits (457), Expect = 1e-48
Identities = 94/161 (58%), Positives = 121/161 (75%), Gaps = 1/161 (0%)
Frame = +3
Query: 246 VAFT-DTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGK 422
VAFT D ERL+G +AK Q +NP NT F KRLIGR+F +P++Q+D+K P+K++
Sbjct: 88 VAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEH-SN 146
Query: 423 PKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKD 602
+E +G+T ++P +I +L+KM+ETA YLG V++AVVTVPAYFNDSQRQATK
Sbjct: 147 GDAWLEARGKT--YSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKA 204
Query: 603 AGAIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLG 725
AGAIAGLNVLR++NEPTAAALAYGLDK K + V +FDLG
Sbjct: 205 AGAIAGLNVLRVVNEPTAAALAYGLDK--KNDAIVAVFDLG 243
Score = 49.2 bits (112), Expect = 7e-07
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +1
Query: 724 GGGTFDVSILTIDEGSLFEVKSTAGDPHLGGE 819
GGGTFD+SIL ++ G +FEV+ST GD HLGGE
Sbjct: 243 GGGTFDISILELNNG-VFEVRSTNGDTHLGGE 273
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 128 KMPAIGIDLGTTYSCVGVWQHGNVEIIANDQG 223
K P IGIDLGTT SC+ + + ++IAN +G
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEG 80
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 108 bits (260), Expect = 8e-25
Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 5/179 (2%)
Frame = +3
Query: 246 VAFTDTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHW-PFKVINDCGK 422
V++ + R +G+AAK+ A N NTV KRL GR +DDP+I+ ++ K+ G
Sbjct: 43 VSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGF 102
Query: 423 PKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKD 602
++++ E F+ ++ + TK+K AEA L +V D V+++PA+F D QR+A +
Sbjct: 103 VGAKVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLE 162
Query: 603 AGAIAGLNVLRIINEPTAAALAYGLDK----NLKGERNVLIFDLGWRNLRRVHPDYRRG 767
A IAGLN LR++N+ AAAL YG+ K + R V I D G N ++ RG
Sbjct: 163 AANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRG 221
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 72.1 bits (169), Expect = 9e-14
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Frame = +3
Query: 276 GDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQ-DMKHWPFKVINDCG-KPKIQIEFKG 449
G A+ Q+ N +N+V + + L+G+ D+ + P V G K +Q + +
Sbjct: 72 GVQARGQLVRNADNSVTNFRDLLGKSHDELTLHHCHYSANPVNVEGQIGFKITVQEDEES 131
Query: 450 ETKR--FAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGL 623
+ K E S L ++ E+AE +LG+ V V++VP YF D+QR+A + A AGL
Sbjct: 132 DPKEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGL 191
Query: 624 NVLRIINEPTAAALAYGLDKNLKGERNVLIFDLG 725
VL++I++P A LA + + ++ V++ + G
Sbjct: 192 PVLQLIHDPAAVILALMYSEEVLIDKTVVVANFG 225
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 140 IGIDLGTTYSCVGVWQHGNVEIIANDQGQPYHTIVRRVHGHGASH 274
IGI G S + + G +++AN++G + HG H
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYH 71
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 60.9 bits (141), Expect = 2e-10
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 3/163 (1%)
Frame = +3
Query: 246 VAFTDTERLIGDAAKNQVALNPNNTVFDAKRLIGRK-FDDPKIQQDMKHWPFKVINDCGK 422
VAF ER+ G A N P +++ + K L+ + +Q+ +P + + +
Sbjct: 61 VAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEE 120
Query: 423 PKIQIEFK-GETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATK 599
I F + + ++ EEI +M + AE + D V+TVP +FN+ QR
Sbjct: 121 TTSGISFVISDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILL 180
Query: 600 DAGAIAGLNVLRIINEPTAAALAYGLDKNLKGERNV-LIFDLG 725
+A I +VL +I++ A A+ Y L ++ + +I+D G
Sbjct: 181 EAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSG 223
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 32.7 bits (71), Expect = 0.067
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 246 VAFTDTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVIND-CGK 422
+ F+D E GD A L P + AK L+G+ D I D P++V+ D G
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 423 PKIQIE 440
K+ I+
Sbjct: 185 LKLMID 190
>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
Sir2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 29.9 bits (64), Expect = 0.47
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 351 KFDDPKIQQDMKHWPFKVINDCGKPKIQIEFKGETKR 461
K D ++ +D+++ N+CGKP +++ G+ K+
Sbjct: 280 KVDGSELYEDIRNQRVSYCNECGKPPLKLRRVGQNKK 316
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 143 GIDLGTTYSCVGVWQHGNVEIIANDQGQPYHTIV 244
G LG TY+ V Q G+VE+ D HT++
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQRHTLI 1312
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +1
Query: 4 WKNYFETQYEADEESSVQTEN-KFFDELFIVYCEEVS--TVINIQNASYRN 147
W+ Y+ Y+ + + +N KF DE +V+ +S +INI ++YRN
Sbjct: 147 WEEYYYNSYDYMNDQNASNKNRKFDDEGMLVFAGILSILVIINIY-SNYRN 196
>SPAC23H3.02c |ini1||RING finger-like protein
Ini1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 572 EVCRNCDYRIPHCTSQIRFRRLLHFCQHHA 483
++C CD + P C S +R L+ C A
Sbjct: 21 KLCERCDEKCPICDSHVRPTTLVRICDECA 50
>SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase
Agn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 609 AIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGWRNLR 740
A AGL + +I+N T A YG N+ G +V++++ + R
Sbjct: 388 AAAGLPLFQILNGTTVIAQGYG-PLNILGNNSVVLYNFNFCTTR 430
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 603 AGAIAGLNVLRIINEPTAAALAYGLDKNLKGE 698
A AI +NV R+ N A L G+D N+K +
Sbjct: 1049 ADAIVPVNVRRVTNRFVAVKLDCGIDGNIKAD 1080
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = -3
Query: 427 FGLPQSLITLK---GQCFMSC*ILGSSN---FLPISLFASNTVLLGFKATWFLA 284
F +PQ + +K + F ILG+S +LP+++F + ++LGF +F A
Sbjct: 504 FWIPQIIQNVKQGTSRSFTWTYILGASVLRLYLPLAIFIDSELILGFPPKYFFA 557
>SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 585
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 748 WTRRRFLHPRSKIRTFLSPLRFLSRPYASAAAVGSLMMRSTFRPAMAPASL 596
W +RR PR+ + + S +S+P +S + GS ++S+ + + SL
Sbjct: 119 WAKRR--KPRTTVESNASSSHLVSKPESSHPSTGSFEVKSSSSKSRSSMSL 167
>SPAC1B3.09c |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 528
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = +1
Query: 4 WKNYFETQYEADEESSVQTENKFFDELFIVYCEEVSTVINIQNASYRN 147
WKN + E + +K +L + Y E + T N + Y+N
Sbjct: 128 WKNVEKDLKETLDNVDFDARSKILQDLRLEYAEILLTKFNFEKKGYQN 175
>SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 673 PYASAAAVGSLMMRSTFRP 617
PYA A+ GSL+ R FRP
Sbjct: 277 PYALASNYGSLLARIVFRP 295
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,136,768
Number of Sequences: 5004
Number of extensions: 62460
Number of successful extensions: 277
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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