Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_N24
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC027990-1|AAH27990.1| 770|Homo sapiens tetratricopeptide repea... 46 2e-04
AY358762-1|AAQ89122.1| 653|Homo sapiens DRDL5813 protein. 46 2e-04
AL833086-1|CAD89930.1| 462|Homo sapiens hypothetical protein pr... 46 2e-04
AK074095-1|BAB84921.1| 454|Homo sapiens FLJ00166 protein protein. 46 2e-04
AK055984-1|BAB71064.1| 770|Homo sapiens protein ( Homo sapiens ... 46 2e-04
AB075860-1|BAB85566.2| 660|Homo sapiens KIAA1980 protein protein. 42 0.002
>BC027990-1|AAH27990.1| 770|Homo sapiens tetratricopeptide repeat
domain 14 protein.
Length = 770
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/71 (25%), Positives = 38/71 (53%)
Frame = +2
Query: 119 EKKNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPT 298
+ ++ YA+MPP E F+ + R FF +++ G+++IG + + G + ++C
Sbjct: 93 DSEDHYAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGI 152
Query: 299 SRYVADINVKA 331
R +A + + A
Sbjct: 153 MRDIAHLEITA 163
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +3
Query: 522 STDDFPLIYKKTMDMKG---ENYEAILEKSPGFNNPNCIQFLSEHLGL 656
S+++ PL Y++++++ E+YE +++ S GF NP ++FL E LG+
Sbjct: 225 SSEELPLYYRRSVELNSNSLESYENVMQSSLGFVNPGVVEFLLEKLGI 272
>AY358762-1|AAQ89122.1| 653|Homo sapiens DRDL5813 protein.
Length = 653
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/71 (25%), Positives = 38/71 (53%)
Frame = +2
Query: 119 EKKNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPT 298
+ ++ YA+MPP E F+ + R FF +++ G+++IG + + G + ++C
Sbjct: 93 DSEDHYAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGI 152
Query: 299 SRYVADINVKA 331
R +A + + A
Sbjct: 153 MRDIAHLEITA 163
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +3
Query: 522 STDDFPLIYKKTMDMKG---ENYEAILEKSPGFNNPNCIQFLSEHLGL 656
S+++ PL Y++++++ E+YE +++ S GF NP ++FL E LG+
Sbjct: 225 SSEELPLYYRRSVELNSNSLESYENVMQSSLGFVNPGVVEFLLEKLGI 272
>AL833086-1|CAD89930.1| 462|Homo sapiens hypothetical protein
protein.
Length = 462
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/71 (25%), Positives = 38/71 (53%)
Frame = +2
Query: 119 EKKNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPT 298
+ ++ YA+MPP E F+ + R FF +++ G+++IG + + G + ++C
Sbjct: 116 DSEDHYAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGI 175
Query: 299 SRYVADINVKA 331
R +A + + A
Sbjct: 176 MRDIAHLEITA 186
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +3
Query: 522 STDDFPLIYKKTMDMKG---ENYEAILEKSPGFNNPNCIQFLSEHLGL 656
S+++ PL Y++++++ E+YE +++ S GF NP ++FL E LG+
Sbjct: 248 SSEELPLYYRRSVELNSNSLESYENVMQSSLGFVNPGVVEFLLEKLGI 295
>AK074095-1|BAB84921.1| 454|Homo sapiens FLJ00166 protein protein.
Length = 454
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/71 (25%), Positives = 38/71 (53%)
Frame = +2
Query: 119 EKKNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPT 298
+ ++ YA+MPP E F+ + R FF +++ G+++IG + + G + ++C
Sbjct: 108 DSEDHYAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGI 167
Query: 299 SRYVADINVKA 331
R +A + + A
Sbjct: 168 MRDIAHLEITA 178
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +3
Query: 522 STDDFPLIYKKTMDMKG---ENYEAILEKSPGFNNPNCIQFLSEHLGL 656
S+++ PL Y++++++ E+YE +++ S GF NP ++FL E LG+
Sbjct: 240 SSEELPLYYRRSVELNSNSLESYENVMQSSLGFVNPGVVEFLLEKLGI 287
>AK055984-1|BAB71064.1| 770|Homo sapiens protein ( Homo sapiens
cDNA FLJ31422 fis, clone NT2NE2000384, weakly similar to
MICRONUCLEAR LINKER HISTONE POLYPROTEIN. ).
Length = 770
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/71 (25%), Positives = 38/71 (53%)
Frame = +2
Query: 119 EKKNLYALMPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPT 298
+ ++ YA+MPP E F+ + R FF +++ G+++IG + + G + ++C
Sbjct: 93 DSEDHYAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGI 152
Query: 299 SRYVADINVKA 331
R +A + + A
Sbjct: 153 MRDIAHLEITA 163
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +3
Query: 522 STDDFPLIYKKTMDMKG---ENYEAILEKSPGFNNPNCIQFLSEHLGL 656
S+++ PL Y++++++ E+YE +++ S GF NP ++FL E LG+
Sbjct: 225 SSEELPLYYRRSVELNSNSLESYENVMQSSLGFVNPGVVEFLLEKLGI 272
>AB075860-1|BAB85566.2| 660|Homo sapiens KIAA1980 protein protein.
Length = 660
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +3
Query: 522 STDDFPLIYKKTMDMKG---ENYEAILEKSPGFNNPNCIQFLSEHLGL 656
S+++ PL Y++++++ E+YE +++ S GF NP ++FL E LG+
Sbjct: 115 SSEELPLYYRRSVELNSNSLESYENVMQSSLGFVNPGVVEFLLEKLGI 162
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,545,642
Number of Sequences: 237096
Number of extensions: 2046499
Number of successful extensions: 6824
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6824
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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