Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_N13
         (856 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    72   3e-12
BC062539-1|AAH62539.1|  785|Homo sapiens Sp1 transcription facto...    30   9.3  
BC043224-1|AAH43224.1|  798|Homo sapiens SP1 protein protein.          30   9.3  
AF252284-1|AAF67726.1|  782|Homo sapiens transcription specifici...    30   9.3  
AB039286-1|BAB13476.1|  558|Homo sapiens transcription factor Sp...    30   9.3  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 32/36 (88%), Positives = 33/36 (91%)
 Frame = -3

Query: 641 IGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC*K 534
           IGRADIEGSKS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 2   IGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>BC062539-1|AAH62539.1|  785|Homo sapiens Sp1 transcription factor
           protein.
          Length = 785

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -1

Query: 754 NDKPSVG*TNLSHDGXTQLTXLLMGEQSNAWRILLRNE*EEPTSKDQKATS 602
           N   S G +     G   LT   + + +N W+I+  +    PTSK+Q  +S
Sbjct: 77  NSNNSQGPSQSGGTGELDLTATQLSQGANGWQIISSSSGATPTSKEQSGSS 127


>BC043224-1|AAH43224.1|  798|Homo sapiens SP1 protein protein.
          Length = 798

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -1

Query: 754 NDKPSVG*TNLSHDGXTQLTXLLMGEQSNAWRILLRNE*EEPTSKDQKATS 602
           N   S G +     G   LT   + + +N W+I+  +    PTSK+Q  +S
Sbjct: 90  NSNNSQGPSQSGGTGELDLTATQLSQGANGWQIISSSSGATPTSKEQSGSS 140


>AF252284-1|AAF67726.1|  782|Homo sapiens transcription specificity
           factor Sp1 protein.
          Length = 782

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -1

Query: 754 NDKPSVG*TNLSHDGXTQLTXLLMGEQSNAWRILLRNE*EEPTSKDQKATS 602
           N   S G +     G   LT   + + +N W+I+  +    PTSK+Q  +S
Sbjct: 74  NSNNSQGPSQSGGTGELDLTATQLSQGANGWQIISSSSGATPTSKEQSGSS 124


>AB039286-1|BAB13476.1|  558|Homo sapiens transcription factor Sp1
           protein.
          Length = 558

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -1

Query: 754 NDKPSVG*TNLSHDGXTQLTXLLMGEQSNAWRILLRNE*EEPTSKDQKATS 602
           N   S G +     G   LT   + + +N W+I+  +    PTSK+Q  +S
Sbjct: 77  NSNNSQGPSQSGGTGELDLTATQLSQGANGWQIISSSSGATPTSKEQSGSS 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,752,321
Number of Sequences: 237096
Number of extensions: 2820008
Number of successful extensions: 6216
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6215
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)