Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_N10
(892 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 50 4e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 44 1e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 43 3e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 42 6e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 41 2e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 40 2e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 40 4e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 39 5e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.002
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 29 0.057
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 28 0.13
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 27 0.17
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 25 0.70
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 25 0.70
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 25 0.70
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 25 1.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.2
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 4.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 49.6 bits (113), Expect = 4e-08
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Frame = +1
Query: 76 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 234
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 235 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
+ L+ W D + W+ E+G T L V SE +W PD+VL N A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113
Score = 29.9 bits (64), Expect = 0.033
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 389 TTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
TT++ + G V W + + + +P D QTC KFGS
Sbjct: 120 TTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 258
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 360
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 485 WPXDMQTCTFKFGSRMHNSDE 547
WP D+ CT S H S+E
Sbjct: 166 WPYDILNCTIHIASWSHGSNE 186
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 45.2 bits (102), Expect = 8e-07
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Frame = +1
Query: 67 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 225
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 226 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 372
T + ++ W D +L WN ++G T V SE +W PD+VL N A
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 389 TTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
T ++ + + G V W + + ++ +P D QTC KFGS
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 267
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 268 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 366
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 419 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
+G V + RL I M L+N+P D Q C +FGS
Sbjct: 115 DGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 43.6 bits (98), Expect = 2e-06
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Frame = +1
Query: 94 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 252
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
++ +W D +L W+ E+G L V S+ +WRPD+VL N A
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
Score = 29.5 bits (63), Expect = 0.043
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 392 TLSAPGVSN-NGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
TL+ N G V W + + ++ +P D QTC KFGS
Sbjct: 124 TLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 26.6 bits (56), Expect = 0.30
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +2
Query: 386 GTTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
GT ++ V+++GS ++ + M + +P D Q C KFGS ++ ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 25.4 bits (53), Expect = 0.70
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 386 GTTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
GT ++ V+++GS ++ + + + +P D Q C KFGS ++ ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 25.8 bits (54), Expect = 0.53
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 386 GTTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
GT ++ V+++GS ++ + + + +P D Q C KFGS ++ ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 25.4 bits (53), Expect = 0.70
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 386 GTTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
GT ++ V+++GS ++ + + + +P D Q C KFGS ++ ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 27.1 bits (57), Expect = 0.23
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +2
Query: 386 GTTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
GT ++ V+++GS ++ + M + +P D Q C KFGS ++ ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 27.9 bits (59), Expect = 0.13
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +2
Query: 386 GTTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
GT ++ V++NGS ++ + + + +P D Q C KFGS ++ ++
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 138
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
Score = 26.6 bits (56), Expect = 0.30
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +2
Query: 386 GTTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
GT + V++NGS ++ + + + +P D Q C KFGS ++ ++
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 206
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
Score = 26.6 bits (56), Expect = 0.30
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +2
Query: 386 GTTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
GT + V++NGS ++ + + + +P D Q C KFGS ++ ++
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 206
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 42.3 bits (95), Expect = 6e-06
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Frame = +1
Query: 121 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 279
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 280 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
L WN E+G L V SE +W PD+VL N A
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
Score = 31.1 bits (67), Expect = 0.014
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 389 TTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHN 538
T ++ + G VSW + + ++ +P D Q+C KFGS +N
Sbjct: 133 TLMTKATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYN 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 40.7 bits (91), Expect = 2e-05
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
Score = 29.1 bits (62), Expect = 0.057
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 389 TTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
T ++ V +G V W + S+ ++ +P D+QTC K GS
Sbjct: 128 TLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGS 173
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 40.7 bits (91), Expect = 2e-05
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
Score = 29.1 bits (62), Expect = 0.057
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
+ + G V W + + ++ +P D QTC KFGS
Sbjct: 135 IYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGS 173
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 175 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 351
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 352 VVLLNAA 372
+L N A
Sbjct: 92 TILYNNA 98
Score = 26.6 bits (56), Expect = 0.30
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
VS+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 113 VSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 39.5 bits (88), Expect = 4e-05
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 345
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 346 PDVVLLNAA 372
PD+VL N A
Sbjct: 111 PDIVLFNNA 119
Score = 36.3 bits (80), Expect = 4e-04
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 419 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
NG V W+ + ++ + +P D QTC KFGS N D+
Sbjct: 136 NGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQ 178
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 39.1 bits (87), Expect = 5e-05
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Frame = +1
Query: 73 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 237
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 238 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
L++ W D + WN ++G L + RLW+PDV++ N+A
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116
Score = 26.2 bits (55), Expect = 0.40
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
V NNG+ ++ + + + +P D Q C KFGS
Sbjct: 130 VKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 37.1 bits (82), Expect = 2e-04
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 264
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 265 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT 381
W D LSW ++ G + V S+ +W PD+ + N+ T
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMT 138
Score = 35.1 bits (77), Expect = 9e-04
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 380 PPGTTLSAPGVSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
PP T L V ++GSVS + + + +WP D C FGS +H+ +E
Sbjct: 145 PPTTCL----VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEE 196
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 279
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 280 LSWN--AGEWGCSTWLVSSERLWRPDVVLLN 366
L +N G T L + R+W PD+ N
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
Score = 29.1 bits (62), Expect = 0.057
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 419 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
NGSV + R+ ++ M L +P D Q C+ + S +D+
Sbjct: 145 NGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.002
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +1
Query: 109 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 273
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 274 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 366
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
Score = 32.7 bits (71), Expect = 0.005
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 144 ISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.1 bits (62), Expect = 0.057
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 419 NGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
NGSV + R+ ++ M L +P D Q C+ + S +D+
Sbjct: 145 NGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.9 bits (59), Expect = 0.13
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHN 538
+ +G V RL + ++L+ +P D+Q C F S HN
Sbjct: 124 IDPSGMVRLNTRLQATLNCGLRLEKFPFDVQECPLIFESWTHN 166
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 27.5 bits (58), Expect = 0.17
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
+S +GSV++ R + M L +P D Q CT + S
Sbjct: 143 LSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.4 bits (53), Expect = 0.70
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 120 IHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.4 bits (53), Expect = 0.70
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 120 IHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 25.4 bits (53), Expect = 0.70
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 59 IHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 24.6 bits (51), Expect = 1.2
Identities = 8/38 (21%), Positives = 20/38 (52%)
Frame = +2
Query: 434 WIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
++ +L + +M+ +++P D Q C+ S H + +
Sbjct: 122 YMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQD 159
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +2
Query: 425 SVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGSRMHNSDE 547
++ ++ +L + +M +P D Q C + S H +DE
Sbjct: 150 TILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDE 190
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 4.9
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +1
Query: 175 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 336
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 337 LWRPDVVLLNA 369
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 168 IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 168 IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 219 IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +2
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPXDMQTCTFKFGS 526
+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 168 IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 318 PSAAAPLPCVPTQS 277
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,003
Number of Sequences: 438
Number of extensions: 4291
Number of successful extensions: 90
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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