Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_N08
(810 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1381 - 26166673-26166747,26166972-26167544 33 0.36
01_07_0360 + 43056226-43057566 33 0.36
07_03_1380 - 26163993-26164076,26164769-26165365 32 0.47
01_05_0397 + 21753095-21753814 32 0.62
07_03_1382 - 26170563-26170631,26171151-26171843 31 1.1
01_05_0394 + 21733751-21734584 31 1.1
08_01_0122 + 967983-968463,970082-970342,970471-971346,971837-97... 31 1.4
07_03_1121 - 24130451-24130462,24130827-24131255 30 2.5
01_05_0398 - 21756818-21757534 29 3.3
12_01_0919 - 9086879-9087064,9087842-9087923,9088357-9089553,908... 29 4.4
07_03_1345 + 25919379-25920866,25921342-25921962,25922733-259228... 29 4.4
03_02_0534 - 9267297-9267734,9268376-9268649,9268782-9268889,926... 29 4.4
01_07_0264 - 42388455-42388565,42388656-42388688,42388792-423889... 29 4.4
01_05_0395 + 21739350-21740165 29 4.4
01_05_0393 - 21732178-21732287,21732875-21733436 29 4.4
10_02_0126 - 5543658-5543670,5543748-5543840,5544344-5544529,554... 29 5.8
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 29 5.8
05_03_0070 - 8023343-8023528,8023606-8023639,8024013-8024058,802... 28 7.6
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 28 7.6
02_05_0783 + 31723330-31723585,31723683-31723857,31723953-317241... 28 7.6
02_05_0407 + 28715332-28715385,28715528-28715680,28715810-287158... 28 7.6
>07_03_1381 - 26166673-26166747,26166972-26167544
Length = 215
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 170 NNTTIMSEAQANENTCVVCFKNVLYYSIGECDH-PVCFECSTRMRV 304
++ ++ A ++CVVC + + + +IG C H VC C+ +RV
Sbjct: 17 SHDVVIDVGGATTSSCVVCMEPLEWAAIGPCGHGDVCAGCALHIRV 62
>01_07_0360 + 43056226-43057566
Length = 446
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 191 EAQANENTCVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQK 319
E++ E C +CF+ + EC H +C C+ + + C K
Sbjct: 309 ESEDEEEACNICFEQACSMEVKECGHQMCAACT--LAICCHSK 349
>07_03_1380 - 26163993-26164076,26164769-26165365
Length = 226
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 203 NENTCVVCFKNVLYYSIGECDH-PVCFECSTRMRV 304
+ ++C VC + + + +IG C H VC CS R+RV
Sbjct: 33 SSSSCAVCTEPLEWAAIGPCGHGDVCAGCSLRIRV 67
>01_05_0397 + 21753095-21753814
Length = 239
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 212 TCVVCFKNVLYYSIGECDH-PVCFECSTRMR 301
+CVVC + + + ++G C H VC C+ R+R
Sbjct: 38 SCVVCTEPIEWVAVGPCGHRVVCSPCAARLR 68
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 194 AQANENTCVVCFKNVLYYSIGECDH-PVCFECSTRMRV 304
A +C VC + + + +IG C H VC C+ +RV
Sbjct: 61 AAGGRRSCAVCMETLEWAAIGPCGHGEVCAGCALHIRV 98
>01_05_0394 + 21733751-21734584
Length = 277
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 215 CVVCFKNVLYYSIGECDH-PVCFECSTRMR 301
CVVC + + + ++G C H VC C+ R+R
Sbjct: 75 CVVCMEPLEWVAVGPCGHRVVCSACAARVR 104
>08_01_0122 +
967983-968463,970082-970342,970471-971346,971837-972327
Length = 702
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 196 SLRHDCCIVYLGFCKSVSVTECFI--KLRVRGSSEFVLD 86
SLRHD + GFC+S + ECF+ + GS LD
Sbjct: 479 SLRHDNLVALRGFCRSRARGECFLVYEFMANGSLSRYLD 517
>07_03_1121 - 24130451-24130462,24130827-24131255
Length = 146
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 194 AQANENTCVVCFKNVLYYSIGECDHP-VCFECSTRMR 301
A N C VC + + + +IG C H VC C ++R
Sbjct: 24 AATTTNCCAVCVEPLEWVAIGPCGHRCVCARCIVQVR 60
>01_05_0398 - 21756818-21757534
Length = 238
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 212 TCVVCFKNVLYYSIGECDH-PVCFECSTRMR 301
+CVVC + + + ++G C H VC C R+R
Sbjct: 66 SCVVCTEPLEWVAVGPCGHRAVCSMCVARVR 96
>12_01_0919 -
9086879-9087064,9087842-9087923,9088357-9089553,
9089598-9089961,9090086-9090188,9090234-9090479
Length = 725
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = +1
Query: 475 KTYWRIGVKSVIRYHRSATLVLLNDHMRRVHERFFCDLCVNHLKILPMKEGVIHDKNWHI 654
K W+ G K R A L D ER D CV H+ ILP E H+ ++
Sbjct: 343 KMSWKKGFKHDPHKKREAYKDKLRDEGAAEFERQMMDFCVKHM-ILPHPETKEHEPDYPF 401
Query: 655 IDV 663
D+
Sbjct: 402 DDL 404
>07_03_1345 + 25919379-25920866,25921342-25921962,25922733-25922893,
25923284-25923422,25923509-25923592,25923944-25923982,
25924037-25924222,25924347-25924478,25924810-25925009,
25925294-25925498,25925618-25925944
Length = 1193
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 188 SEAQANENTCVVCFKNVLYYSIGECDHPVCFECSTR 295
S A E+ C +C+ + + C H C+ C TR
Sbjct: 1124 STASNEEDNCCICYNSDSDTTFEPCHHRSCYGCITR 1159
>03_02_0534 -
9267297-9267734,9268376-9268649,9268782-9268889,
9269476-9269567,9269652-9269711,9269812-9269994
Length = 384
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 170 NNTTIMSEAQA--NENTCVVCFKNVLYYSIGECDHPVCFECS 289
++ I EA A C +CF+ + EC H +C C+
Sbjct: 233 HDAAISEEAAAAGGGEVCSICFEQACTIEVRECGHQMCAACT 274
>01_07_0264 -
42388455-42388565,42388656-42388688,42388792-42388905,
42389011-42389100,42389173-42389268,42389363-42389404,
42389498-42389608,42392258-42392440,42392518-42392961
Length = 407
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 342 DLLRVVFT-DSIHPYKELGNREYP-DRLFERQYKIVFCSEDIKNAYE 476
D L+VV+ D H +K E D+LF +Y+ CS+DI E
Sbjct: 327 DALKVVYEMDMFHSFKFAVEAELNGDKLFGLEYRFSMCSKDISGDVE 373
>01_05_0395 + 21739350-21740165
Length = 271
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 212 TCVVCFKNVLYYSIGECDH-PVCFECSTRMR 301
+C VC + + + ++G C H VC C+ R+R
Sbjct: 76 SCAVCMEPLEWVAVGPCGHRVVCPACAARVR 106
>01_05_0393 - 21732178-21732287,21732875-21733436
Length = 223
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 212 TCVVCFKNVLYYSIGECDH-PVCFECSTRMR 301
+C VC + + + ++G C H VC C+ R+R
Sbjct: 68 SCAVCTEPLEWAAVGPCGHRAVCSACAARVR 98
>10_02_0126 -
5543658-5543670,5543748-5543840,5544344-5544529,
5544613-5545310,5545323-5546237,5546842-5547081
Length = 714
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +1
Query: 475 KTYWRIGVKSVIRYHRSATLVLLNDHMRRVHERFFCDLCVNHLKILPMKEGVIHDKNWHI 654
K W+ G K R A L D ER D CV H KILP E + ++
Sbjct: 211 KMSWKEGFKHDPHKKREAYKDKLRDEGAAEFERQMMDFCVKH-KILPRPETKEPEPDYPF 269
Query: 655 IDVK 666
D+K
Sbjct: 270 DDLK 273
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 28.7 bits (61), Expect = 5.8
Identities = 26/87 (29%), Positives = 39/87 (44%)
Frame = +3
Query: 246 TQLASVTIPYVSSALLGCGCSVFRNECPICRKDLLRVVFTDSIHPYKELGNREYPDRLFE 425
T L+ +P S A G C + ECP DL +HPY+ RE +L E
Sbjct: 139 TTLSPADLPICSFAA-GGNCP-YGEECPQMHGDLCTTCGKMCLHPYRP-DEREEHTKLCE 195
Query: 426 RQYKIVFCSEDIKNAYENLLENRCKIC 506
+ +K + E +K + E +E C +C
Sbjct: 196 KNHKRL---ESLKRSQE--IE--CSVC 215
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 9/53 (16%)
Frame = +2
Query: 170 NNTTIMSEAQANENTCVVCFKNVL---------YYSIGECDHPVCFECSTRMR 301
N+ + S ++ E C VC VL + + ECDHP C C R
Sbjct: 197 NHKRLESLKRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWR 249
>05_03_0070 -
8023343-8023528,8023606-8023639,8024013-8024058,
8024139-8024389,8024473-8026001,8026128-8026496,
8026582-8026821
Length = 884
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +1
Query: 475 KTYWRIGVKSVIRYHRSATLVLLNDHMRRVHERFFCDLCVNHLKILPMKEGVIHDKNWHI 654
K W+ G K+ R A L D ER D CV H+ ILP E + ++
Sbjct: 342 KMSWKEGFKNDPHKKREAYKDKLRDEGAAEFERQMMDFCVKHM-ILPRPETKETEPDYPF 400
Query: 655 IDVK 666
D+K
Sbjct: 401 DDLK 404
>03_05_0791 +
27736978-27737217,27737648-27739191,27739512-27739763,
27739844-27739954,27740042-27740102,27740373-27740558
Length = 797
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +1
Query: 475 KTYWRIGVKSVIRYHRSATLVLLNDHMRRVHERFFCDLCVNHLKILPMKEGVIHDKNWHI 654
K W+ G K+ R A L D ER D CV H+ ILP E + ++
Sbjct: 269 KMSWKEGFKNDPHKKREAYKDKLRDEGAAEFERQMMDFCVKHM-ILPRPETKETEPDYPF 327
Query: 655 IDVK 666
D+K
Sbjct: 328 DDLK 331
>02_05_0783 +
31723330-31723585,31723683-31723857,31723953-31724166,
31724388-31725032,31725199-31725335,31725440-31725554
Length = 513
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 138 PSVLLNCEYVEAQNLSWINTTYYYTLKLEHKRKGR-TKFCD 19
PS+ EYV N+S + ++ T++ EH+ KG+ +CD
Sbjct: 89 PSIFDADEYVSVSNVSDVPSSEGNTMQDEHRNKGKDLLYCD 129
>02_05_0407 +
28715332-28715385,28715528-28715680,28715810-28715872,
28715988-28716021,28716157-28716279,28716400-28716462,
28716655-28716748,28717049-28717094,28717180-28717247,
28717360-28717408,28717593-28717658,28718876-28719074,
28719344-28719386,28719719-28719923
Length = 419
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1
Query: 510 YHRFYTDSPISFHMHFLCLQNRIQFCI 430
Y TDS SF FLC I FC+
Sbjct: 191 YRAMRTDSAFSFGWFFLCYMLHIAFCV 217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,468,029
Number of Sequences: 37544
Number of extensions: 403637
Number of successful extensions: 1067
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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