Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_N02
         (1017 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X78349-1|CAA55144.1|  686|Drosophila melanogaster Grd protein.         32   1.5  
AE014296-2969|AAF49298.2|  686|Drosophila melanogaster CG7446-PA...    32   1.5  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   7.8  

>X78349-1|CAA55144.1|  686|Drosophila melanogaster Grd protein.
          Length = 686

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
 Frame = +2

Query: 110 ECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQ 277
           +  N  ++S ++D+LL  YD    PD       + + + +R    I E + T  +    +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161

Query: 278 MNWIDKRLSWNAGE 319
            +W+DKRL++   +
Sbjct: 162 QSWVDKRLAFEGAQ 175


>AE014296-2969|AAF49298.2|  686|Drosophila melanogaster CG7446-PA
           protein.
          Length = 686

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
 Frame = +2

Query: 110 ECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQ 277
           +  N  ++S ++D+LL  YD    PD       + + + +R    I E + T  +    +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161

Query: 278 MNWIDKRLSWNAGE 319
            +W+DKRL++   +
Sbjct: 162 QSWVDKRLAFEGAQ 175


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 371   VRPPQAXPRTPAKCCSPIPLRSNSVVCRSNSFEDLP 264
             V PP   P+TP+  C P P  +N+ +C +     LP
Sbjct: 20370 VLPPPPPPKTPSDPCQPSPCGANA-LCNNGQCSCLP 20404


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,745,722
Number of Sequences: 53049
Number of extensions: 581994
Number of successful extensions: 1295
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5181238359
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)