Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_M23
(855 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 56 5e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 5e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 55 7e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 55 7e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 55 1e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 53 3e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 53 4e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 52 7e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 52 9e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 8e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 4e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 43 3e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 3e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 38 1e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 38 1e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 38 1e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 36 4e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 4e-04
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 31 0.014
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 28 0.13
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.7
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 60.9 bits (141), Expect = 1e-11
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Frame = +3
Query: 186 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 359
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 360 PDVVLLN-AXATTAGGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXG 536
PD+VL N A Y + NG V W+ ++ + +P D QTC K G
Sbjct: 111 PDIVLFNNADGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFG 170
Query: 537 SRMXNXDXMDS*LTKN 584
S N D + L N
Sbjct: 171 SWTFNGDQVSLALYNN 186
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.2 bits (132), Expect = 2e-10
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +3
Query: 147 SSQRTIGTPPPNSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEW 317
SS T+ P N + V + L+ ++ E + A L++ W+D L WN E+
Sbjct: 64 SSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 318 -GCSTWLVSSERLWRPDVVLLN-AXATTAGGYALRARVSNNGSVSWIKRLDISXXISMQL 491
G ++ +LW+PD+++ N A G Y V++NGS ++ + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 492 DNWPIDMQTCTXKXGSRMXNXDXMD 566
+P D Q C K GS + + +D
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.2 bits (132), Expect = 2e-10
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +3
Query: 147 SSQRTIGTPPPNSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEW 317
SS T+ P N + V + L+ ++ E + A L++ W+D L WN E+
Sbjct: 64 SSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 318 -GCSTWLVSSERLWRPDVVLLN-AXATTAGGYALRARVSNNGSVSWIKRLDISXXISMQL 491
G ++ +LW+PD+++ N A G Y V++NGS ++ + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 492 DNWPIDMQTCTXKXGSRMXNXDXMD 566
+P D Q C K GS + + +D
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.8 bits (131), Expect = 2e-10
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Frame = +3
Query: 186 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 359
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 360 PDVVLLN-AXATTAGGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXG 536
PD+VL N A A +A + + G V W + ++ +P D QTC K G
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 537 S 539
S
Sbjct: 173 S 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN-AXATTAGGYALRARVSNNGS 440
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 441 VSWIKRLDISXXISMQLDNWPIDMQTCTXKXGS 539
V W + ++ +P D QTC K GS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 55.6 bits (128), Expect = 5e-10
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 398
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXGSRMXNXDXMD 566
G Y V++NGS ++ + + +P D Q C K GS + + +D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.6 bits (128), Expect = 5e-10
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 186 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 359
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 360 PDVVLLN-AXATTAGGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXG 536
PD+VL N A +A V +G V W S+ ++ +P D+QTC K G
Sbjct: 113 PDIVLYNNADGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLG 172
Query: 537 S 539
S
Sbjct: 173 S 173
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 55.2 bits (127), Expect = 7e-10
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Frame = +3
Query: 180 NSKIVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSE 347
N +VV L L L N+++ T + L+ W D + W+ E+G T L V SE
Sbjct: 43 NDTVVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSE 100
Query: 348 RLWRPDVVLLNAXATTAGGYAL-RARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCT 524
+W PD+VL N G + +A + G V W + + +P D QTC
Sbjct: 101 HIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCF 160
Query: 525 XKXGS 539
K GS
Sbjct: 161 MKFGS 165
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 55.2 bits (127), Expect = 7e-10
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +3
Query: 267 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN-AXATTAGGYALRARVSNNGS 440
++ W D +L WN E+G L V SE +W PD+VL N A +A + G
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGD 145
Query: 441 VSWIKRLDISXXISMQLDNWPIDMQTCTXKXGSRMXNXDXMD 566
VSW + ++ +P D Q+C K GS N +D
Sbjct: 146 VSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 398
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXGSRMXNXDXMD 566
G Y V+++GS ++ M + +P D Q C K GS + + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 398
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXGSRMXNXDXMD 566
G Y V+++GS ++ M + +P D Q C K GS + + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 53.6 bits (123), Expect = 2e-09
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 398
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXGSRMXNXDXMD 566
G Y V+++GS ++ + + +P D Q C K GS + + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.6 bits (123), Expect = 2e-09
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Frame = +3
Query: 156 RTIGTPPPNSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CST 329
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 330 WLVSSERLWRPDVVLL-NAXATTAGGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPI 506
V SE +W PD+VL NA +A + + G V W + ++ +P
Sbjct: 95 LHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPF 154
Query: 507 DMQTCTXKXGS 539
D QTC K GS
Sbjct: 155 DEQTCFMKFGS 165
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 398
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXGSRMXNXDXMD 566
G Y V+++GS ++ + + +P D Q C K GS + + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 398
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 399 GGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXGSRMXNXDXMD 566
G Y V+++GS ++ + + +P D Q C K GS + + +D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.8 bits (121), Expect = 4e-09
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +3
Query: 228 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAXAT---TA 398
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 399 GGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXGS 539
R+ +G V + RL I M L+N+P+D Q C + GS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 52.0 bits (119), Expect = 7e-09
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Frame = +3
Query: 153 QRTIGTPPPNSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 332
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 333 L-VSSERLWRPDVVLLN-AXATTAGGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPI 506
L + RLW+PDV++ N A G Y V NNG+ ++ + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 507 DMQTCTXKXGS 539
D Q C K GS
Sbjct: 158 DDQRCEMKFGS 168
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 51.6 bits (118), Expect = 9e-09
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = +3
Query: 189 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 365
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 366 VVLLNAXATTAGGYALRARV--SNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXGS 539
+L N + V S+ G V W+ + ++ +P D Q C K S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.4 bits (110), Expect = 8e-08
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +3
Query: 228 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAXATTAGGY 407
+ E + + + +W D RLS+ S + ER+WRPD N +
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTI 135
Query: 408 ALR---ARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXGS 539
+ R+S +G + + RL I M+L N+P+D Q+C GS
Sbjct: 136 TVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 47.2 bits (107), Expect = 2e-07
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
Frame = +3
Query: 171 PPPNSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVS 341
P + +I N+T+ L + + S + + + + + W D LSW ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 342 SERLWRPDVVLLNAXATT---AGGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDM 512
S+ +W PD+ + N+ T G V ++GSVS + + + +WP D
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDT 180
Query: 513 QTCTXKXGSRMXNXDXMDS*LTK 581
C GS + + + ++ L K
Sbjct: 181 HRCRINFGSWVHSGEEVNIFLDK 203
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.0 bits (104), Expect = 4e-07
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Frame = +3
Query: 156 RTIGTPPPNSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCS 326
R G + +V + L +R A I + + +Q + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 327 TWLVSSERLWRPDVVLLNAXATTAGGYALR---ARVSNNGSVSWIKRLDISXXISMQLDN 497
T L + R+W PD+ N + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 498 WPIDMQTCTXKXGS 539
+P+D Q C+ + S
Sbjct: 167 YPLDRQVCSLRMAS 180
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Frame = +3
Query: 171 PPPNSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSE 347
P + ++ L ++H N+ E TV L++ W L+W + E+ ++ V S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 348 RLWRPDVVL--LNAXATTAGGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTC 521
+W PD+V+ + + ++ V N+G++ + + WP D+ C
Sbjct: 114 EIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNC 173
Query: 522 TXKXGS 539
T S
Sbjct: 174 TIHIAS 179
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.2 bits (97), Expect = 3e-06
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 6/134 (4%)
Frame = +3
Query: 156 RTIGTPPPNSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCS 326
R G + VV + + +R + I + +Q + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 327 TWLVSSERLWRPDVVLLNAXATTAGGYALR---ARVSNNGSVSWIKRLDISXXISMQLDN 497
T L + R+W PD+ N + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 498 WPIDMQTCTXKXGS 539
+P+D Q C+ + S
Sbjct: 167 YPLDRQVCSLRMAS 180
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.9 bits (89), Expect = 3e-05
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 228 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAXATTAGGY 407
I E I L W D+RL+++ E + +E++W PD N +
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 408 ALR---ARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCTXKXGS 539
R R+S +GSV++ R + M L +P+D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 37.9 bits (84), Expect = 1e-04
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Frame = +3
Query: 138 STRSSQRTIGTPPPNSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 311
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 312 EWGCSTWLVSSERLWRPDV--VLLNAXATTAGGYALRARVSNNGSVSWIKRLDISXXISM 485
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 486 QLDNWPIDMQTCT 524
+L+ +P D C+
Sbjct: 189 RLNIFPFDDPLCS 201
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 37.9 bits (84), Expect = 1e-04
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Frame = +3
Query: 138 STRSSQRTIGTPPPNSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 311
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 312 EWGCSTWLVSSERLWRPDV--VLLNAXATTAGGYALRARVSNNGSVSWIKRLDISXXISM 485
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 486 QLDNWPIDMQTCT 524
+L+ +P D C+
Sbjct: 189 RLNIFPFDDPLCS 201
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 37.9 bits (84), Expect = 1e-04
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Frame = +3
Query: 138 STRSSQRTIGTPPPNSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 311
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 312 EWGCSTWLVSSERLWRPDV--VLLNAXATTAGGYALRARVSNNGSVSWIKRLDISXXISM 485
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 486 QLDNWPIDMQTCT 524
+L+ +P D C+
Sbjct: 189 RLNIFPFDDPLCS 201
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Frame = +3
Query: 165 GTPPPNSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVS 341
G PP + V +T++ L +++ E + + + W D RL++ G T V
Sbjct: 32 GGPP----VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFKK-RTGVETLSVG 86
Query: 342 SE---RLWRPDVVLLNAX------ATTAGGYALRARVSNNGSVSWIKRLDISXXISMQLD 494
SE +W PD +N ATT+ + R+ ++GS++ RL I+ M L
Sbjct: 87 SEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQ 143
Query: 495 NWPIDMQTC 521
+P+D Q C
Sbjct: 144 YFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.3 bits (80), Expect = 4e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +3
Query: 279 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAX------ATTAGGYALRARVSN 431
W D RL++ G T V SE +W PD +N ATT+ + R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 432 NGSVSWIKRLDISXXISMQLDNWPIDMQTC 521
+GS++ RL I+ M L +P+D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.3 bits (80), Expect = 4e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +3
Query: 279 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAX------ATTAGGYALRARVSN 431
W D RL++ G T V SE +W PD +N ATT+ + R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 432 NGSVSWIKRLDISXXISMQLDNWPIDMQTC 521
+GS++ RL I+ M L +P+D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 31.1 bits (67), Expect = 0.014
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Frame = +3
Query: 174 PPNSK---IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCS 326
PP+ + ++V+ + + N I + R+ ++ +WI+ RL + G+ +
Sbjct: 3 PPSKQGLPVLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVT 62
Query: 327 TWLVSSERLWRPDVVLLNAXATTAGGYALRARVSN-----NGSVSWIKRLDISXXISMQL 491
+ LW+PD LNA + AL + S+ N +V + R+ M+
Sbjct: 63 LPPEFFDSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEF 120
Query: 492 DNWPIDMQTC 521
+P+D+Q C
Sbjct: 121 QLYPMDIQIC 130
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.1 bits (67), Expect = 0.014
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = +3
Query: 189 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 362
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 363 DV--VLLNAXATTAGGYALRARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTCT 524
D ++ R+ NG+V+++ R + +L+ +P D C+
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCS 252
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.9 bits (59), Expect = 0.13
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 351 LWRPDVVLLNAXATTAGGYALR---ARVSNNGSVSWIKRLDISXXISMQLDNWPIDMQTC 521
+W P V + N ++ G ++ + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.2
Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +3
Query: 345 ERLWRPDVVLLNAXATTAGGYALRAR---VSNNGSVSWIKRLDISXXISMQLDNWPIDMQ 515
+ +WRPD NA + T + + + ++ ++ +L + +M +P D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 516 TCTXKXGSRMXNXDXM 563
C + S D M
Sbjct: 176 ECKLQMESLSHTTDEM 191
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 332 PSAAAPLPCVPTQS 291
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,125
Number of Sequences: 438
Number of extensions: 3883
Number of successful extensions: 89
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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