Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_M20
(849 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 43 4e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 5e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 42 5e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 42 7e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 41 1e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 40 4e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 39 7e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 38 9e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 38 1e-04
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 38 1e-04
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 38 2e-04
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 37 2e-04
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 36 4e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 35 8e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 35 8e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 34 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 34 0.001
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.006
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 32 0.006
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 32 0.006
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 32 0.008
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 29 0.054
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.17
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 27 0.17
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.5
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 4.7
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 44.8 bits (101), Expect = 1e-06
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 521 QTCTFXXGSXMXNSDXMDFVI 583
QTC GS N D + +
Sbjct: 163 QTCIMKFGSWTFNGDQVSLAL 183
Score = 25.8 bits (54), Expect = 0.50
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 193 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 339
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 42.7 bits (96), Expect = 4e-06
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 523
ER+WRPD N + + R+S +G + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 524 TCTFXXGS 547
+C GS
Sbjct: 175 SCPLILGS 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.3 bits (95), Expect = 5e-06
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWP 511
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 512 NDMQTCTFXXGSXMXNSDXMD 574
D+QTC GS + +D
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVD 182
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 323 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 231
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.3 bits (95), Expect = 5e-06
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
V S+ +WRPD+VL NA A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 521 QTCTFXXGSXMXNSDXMD 574
QTC GS + +D
Sbjct: 165 QTCVLKFGSWTYDGFKVD 182
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 323 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 231
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 41.9 bits (94), Expect = 7e-06
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
V S+ +WRPD+VL NA A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 521 QTCTFXXGSXMXNSDXMD 574
QTC GS + +D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 41.1 bits (92), Expect = 1e-05
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 493
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 494 QLDNWPNDMQTCTFXXGSXMXNSDXMD 574
++ +P D Q+C GS N +D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.9 bits (89), Expect = 3e-05
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 521 QTCTFXXGSXMXNSDXMDFVI 583
Q C GS + + +D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 26.2 bits (55), Expect = 0.38
Identities = 13/61 (21%), Positives = 26/61 (42%)
Frame = +1
Query: 145 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGV 324
S + +R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 325 G 327
G
Sbjct: 124 G 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.9 bits (89), Expect = 3e-05
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 521 QTCTFXXGSXMXNSDXMDFVI 583
Q C GS + + +D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 26.2 bits (55), Expect = 0.38
Identities = 13/61 (21%), Positives = 26/61 (42%)
Frame = +1
Query: 145 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGV 324
S + +R + ++ +TL + ++ E + A L++ W+D L WN
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 325 G 327
G
Sbjct: 124 G 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 521 QTCTFXXGSXMXNSDXMDFVI 583
Q C GS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.8 bits (54), Expect = 0.50
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +1
Query: 160 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 327
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 39.5 bits (88), Expect = 4e-05
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 320 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 493
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 494 QLDNWPNDMQTCTFXXGSXMXNSDXMD 574
+ +P D QTC GS + +D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID 174
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 38.7 bits (86), Expect = 7e-05
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 521 QTCTFXXGSXMXNSDXMDFVI 583
Q C GS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.8 bits (54), Expect = 0.50
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +1
Query: 160 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 327
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 38.3 bits (85), Expect = 9e-05
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 521 QTCTFXXGSXMXNSDXMDFVI 583
Q C GS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.8 bits (54), Expect = 0.50
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +1
Query: 160 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 327
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 37.9 bits (84), Expect = 1e-04
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 493
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 494 QLDNWPNDMQTCTFXXGSXMXNSDXMD 574
++ +P D QTC GS + +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.9 bits (84), Expect = 1e-04
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 521 QTCTFXXGSXMXNSDXMD 574
Q C GS + +D
Sbjct: 160 QRCEMKFGSWTYDGFQLD 177
Score = 22.6 bits (46), Expect = 4.7
Identities = 12/56 (21%), Positives = 23/56 (41%)
Frame = +1
Query: 160 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 327
+R +G + LTL ++ ++ E + L++ W D + WN G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYG 93
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 37.5 bits (83), Expect = 2e-04
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 521 QTCTFXXGSXMXNSDXMDFVI 583
Q C GS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.8 bits (54), Expect = 0.50
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +1
Query: 160 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 327
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 37.5 bits (83), Expect = 2e-04
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 514
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 515 DMQTCTFXXGSXMXNSDXMDFVIDXR 592
D C GS + + + ++ +D +
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKK 204
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 521 QTCTFXXGSXMXNSDXMDFVI 583
Q C GS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.8 bits (54), Expect = 0.50
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +1
Query: 160 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 327
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 521 QTCTFXXGSXMXNSDXMDFVI 583
Q C GS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.8 bits (54), Expect = 0.50
Identities = 12/56 (21%), Positives = 24/56 (42%)
Frame = +1
Query: 160 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVG 327
+R + ++ +TL + ++ E + A L++ W+D L WN G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 356 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 526
R+W+PD N + T R+ +G V + RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 527 CTFXXGS 547
C GS
Sbjct: 144 CPLQFGS 150
Score = 23.8 bits (49), Expect = 2.0
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 235 IRESESTVRIQADLQMNWIDKRLSWNAG 318
I E + T + + +W+D+RL++ G
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGG 71
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.1 bits (77), Expect = 8e-04
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 350 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 520
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 521 QTCT 532
Q CT
Sbjct: 173 QNCT 176
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 35.1 bits (77), Expect = 8e-04
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPND 517
V R+WRPD +L N A + VS+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 518 MQTCTFXXGS 547
Q C S
Sbjct: 142 EQRCVLKWAS 151
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.3 bits (75), Expect = 0.001
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 341 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 511
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 512 NDMQTCTFXXGSXMXNSDXMDFV 580
D Q C+ S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 23.8 bits (49), Expect = 2.0
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 199 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHL 339
VV + + +R + I + +Q + W+D+RL +N G L++L
Sbjct: 60 VVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.3 bits (75), Expect = 0.001
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 341 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 511
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 512 NDMQTCTFXXGSXMXNSDXMDFV 580
D Q C+ S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 26.6 bits (56), Expect = 0.29
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 199 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHL 339
+V + L +R A I + + +Q + W+D+RL +N G L++L
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.006
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +2
Query: 326 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 478
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 479 TPISMQLDNWPNDMQTC 529
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.006
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +2
Query: 326 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 478
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 479 TPISMQLDNWPNDMQTC 529
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.3 bits (70), Expect = 0.006
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +2
Query: 326 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 478
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 479 TPISMQLDNWPNDMQTC 529
M L +P D Q C
Sbjct: 75 ASCPMNLQYFPMDRQLC 91
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 31.9 bits (69), Expect = 0.008
Identities = 15/77 (19%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 529
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 530 TFXXGSXMXNSDXMDFV 580
+ S + + F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 29.1 bits (62), Expect = 0.054
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 523
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 524 TCTFXXGSXMXNSDXMDFVID 586
C S +D M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.17
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 517
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 518 MQTC 529
+Q C
Sbjct: 127 IQIC 130
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 27.5 bits (58), Expect = 0.17
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 178 PPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 315
P + ++ L ++H N+ E TV L++ W L+W +
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKS 99
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXXGSXMXNSDXMDFV 580
R+ NG+V+++ R + +L+ +P D C+F S + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXXGSXMXNSDXMDFV 580
R+ NG+V+++ R + +L+ +P D C+F S + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXXGSXMXNSDXMDFV 580
R+ NG+V+++ R + +L+ +P D C+F S + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXXGSXMXNSDXMDFV 580
R+ NG+V+++ R + +L+ +P D C+F S + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.7
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 193 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHLAGVL----GTL 360
+ ++N L + + + ++ + D + N + + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 361 V 363
+
Sbjct: 299 I 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,559
Number of Sequences: 438
Number of extensions: 4623
Number of successful extensions: 76
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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