Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_M16
(936 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 56 5e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 56 6e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 50 4e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 49 7e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 49 7e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 1e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 48 2e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 48 2e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 46 5e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 7e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 45 1e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 8e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 4e-04
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.32
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.3
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 7.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.0 bits (129), Expect = 5e-10
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Frame = +3
Query: 138 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 296
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 297 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAATAGDYAL-RAR 470
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 471 VSNNGSVSWIKRLDIXTPISMQLDNWPNDMQT 566
+ G V W + + + +P D QT
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQT 158
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 55.6 bits (128), Expect = 6e-10
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Frame = +3
Query: 162 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 329
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 330 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAA---TAGDYALRARVSNNGSVSWI 500
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 501 KRLDIXTPISMQLDNWPNDMQTWHVQ 578
RL I M L+N+P D Q +Q
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQ 147
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 50.4 bits (115), Expect = 2e-08
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Frame = +3
Query: 156 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 314
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 315 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAAT-AGDYALRARVSNNGS 488
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 489 VSWIKRLDIXTPISMQLDNWPNDMQT 566
V W + + ++ +P D QT
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQT 162
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.0 bits (114), Expect = 3e-08
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 273 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AATA 446
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 447 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTWHVQVRF 587
G Y V++NGS ++ + + + +P D Q H ++F
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQ--HCDMKF 197
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.0 bits (114), Expect = 3e-08
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 273 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AATA 446
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 447 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTWHVQVRF 587
G Y V++NGS ++ + + + +P D Q H ++F
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQ--HCDMKF 197
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 49.6 bits (113), Expect = 4e-08
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 273 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AATA 446
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 447 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTWHVQVRF 587
G Y V++NGS ++ + + + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQ--HCDMKF 129
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 48.8 bits (111), Expect = 7e-08
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 273 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AATA 446
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 447 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTWHVQVRF 587
G Y V+++GS ++ + M + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQ--HCDMKF 129
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 48.8 bits (111), Expect = 7e-08
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Frame = +3
Query: 234 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 407
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 408 PDVVLLNAAAATAGDYALRAR----VSNNGSVSWIKRLDIXTPISMQLDNWPNDMQT 566
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QT
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQT 164
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 48.4 bits (110), Expect = 9e-08
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 273 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AATA 446
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 447 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTWHVQVRF 587
G Y V+++GS ++ + M + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQ--HCDMKF 129
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.4 bits (110), Expect = 9e-08
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Frame = +3
Query: 156 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 320
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 321 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAAATAGDYALRARVSNNGSV 491
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 492 SWIKRLDIXTPISMQLDN--WPNDM 560
+ TP+ + D+ WP D+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDI 170
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 48.4 bits (110), Expect = 9e-08
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Frame = +3
Query: 129 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 287
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 288 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAAATAGDYAL- 461
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 462 ---RARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQT 566
+A + + G V W + + ++ +P D QT
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQT 158
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.0 bits (109), Expect = 1e-07
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Frame = +3
Query: 171 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 335
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 336 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAATAGDYAL---RARVSNNGSVSWIKR 506
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 507 LDIXTPISMQLDNWPNDMQT 566
L I M+L N+P D Q+
Sbjct: 156 LTIKAKCPMELRNFPMDRQS 175
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.0 bits (109), Expect = 1e-07
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Frame = +3
Query: 183 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 347
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 348 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAAATAGDYAL----RARVSNNGSVSWIKRLD 512
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 513 IXTPISMQLDNWPNDMQT 566
+ S+ ++ +P D+QT
Sbjct: 149 YKSSCSIDVEFFPYDVQT 166
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.0 bits (109), Expect = 1e-07
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Frame = +3
Query: 183 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 347
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 348 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAAAT-AGDYALRARVSNNGSVSWIKRLDIXT 521
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 522 PISMQLDNWPNDMQT 566
+ ++ +P D QT
Sbjct: 152 SCEIDVEYFPFDEQT 166
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 47.6 bits (108), Expect = 2e-07
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 273 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AATA 446
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 447 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTWHVQVRF 587
G Y V+++GS ++ + + + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQ--HCDMKF 129
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 47.6 bits (108), Expect = 2e-07
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Frame = +3
Query: 183 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 341
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 342 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAATAGDYAL----RARVSNNGSVSWIKR 506
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 507 LDIXTPISMQLDNWPNDMQT 566
+ + ++ +P D Q+
Sbjct: 152 AIYKSSCEINVEYFPFDEQS 171
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 273 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AATA 446
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 447 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTWHVQVRF 587
G Y V+++GS ++ + + + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQ--HCDMKF 129
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 273 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AATA 446
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 447 GDYALRARVSNNGSVSWIKRLDIXTPISMQLDNWPNDMQTWHVQVRF 587
G Y V+++GS ++ + + + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQ--HCDMKF 129
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 237 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 413
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 414 VVLLNAAAATAGDYALRAR--VSNNGSVSWIKRLDIXTPISMQLDNWPNDMQ 563
+L N A + VS+ G V W+ + + ++ +P D Q
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQ 143
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.0 bits (104), Expect = 5e-07
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Frame = +3
Query: 162 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 329
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 330 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------AATAGDYALRARVSNN 482
D RL++ G T V SE +W PD +N A T+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 483 GSVSWIKRLDIXTPISMQLDNWPNDMQTWHVQV 581
GS++ RL I M L +P D Q H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 45.6 bits (103), Expect = 7e-07
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Frame = +3
Query: 135 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 299
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 300 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-AATAGDYALRARV 473
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 474 SNNGSVSWI 500
NNG+ ++
Sbjct: 131 KNNGTCLYV 139
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.8 bits (101), Expect = 1e-06
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Frame = +3
Query: 162 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 329
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 330 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------AATAGDYALRARVSNN 482
D RL++ G T V SE +W PD +N A T+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 483 GSVSWIKRLDIXTPISMQLDNWPNDMQTWHVQV 581
GS++ RL I M L +P D Q H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 44.4 bits (100), Expect = 2e-06
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Frame = +3
Query: 159 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 326
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 327 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAAAT---AGDYALRARVSNNGSVS 494
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 495 WIKRLDIXTPISMQLDNWPND 557
+ + + +WP D
Sbjct: 159 CVPSVKHVAKCATDFSSWPYD 179
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 8e-06
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 12/139 (8%)
Frame = +3
Query: 183 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 341
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 342 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAAATAGDYAL---RARVSNNGSVSWIKR 506
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 507 LDIXTPISMQLDNWPNDMQ 563
+ + M L +P D Q
Sbjct: 154 ISLTLSCPMNLKLYPLDRQ 172
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.3 bits (80), Expect = 4e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = +3
Query: 327 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------AATAGDYALRARVSN 479
W D RL++ G T V SE +W PD +N A T+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 480 NGSVSWIKRLDIXTPISMQLDNWPNDMQTWHVQV 581
+GS++ RL I M L +P D Q H+++
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 95
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.6 bits (56), Expect = 0.32
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Frame = +3
Query: 237 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 398
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 399 LWRPDVVLLNAAAATAGDYALRARVSN-----NGSVSWIKRLDIXTPISMQLDNWPNDMQ 563
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 380 PSAAAPLPCVPTQS 339
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 7.0
Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 393 ERLWRPDVVLLNAAAATAGDYALRAR---VSNNGSVSWIKRLDIXTPISMQLDNWPNDMQ 563
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 564 TWHVQV 581
+Q+
Sbjct: 176 ECKLQM 181
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,541
Number of Sequences: 438
Number of extensions: 4614
Number of successful extensions: 66
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30597567
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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