Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_M15
         (847 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    35   0.43 
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1...    31   4.0  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 34.7 bits (76), Expect = 0.43
 Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 769 MIGRADIEDQKQR-RYDAWLPTXQXSLGNFSGTSXXK 662
           MIGRADIE  K     +AW P      GNFS TS  K
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
           protein.
          Length = 3530

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -1

Query: 838 RFKPRXRSLXXGEQSNXWXILXXMIGRADIEDQKQRRYDAWLPTXQXSLGN 686
           R +PR RSL     +  W     ++ +A+    +Q   DAWL      +G+
Sbjct: 119 RLRPRARSLSKASTAINWLTKKFLLKKAEESGSEQATVDAWLQRSSSRMGS 169


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,305,199
Number of Sequences: 237096
Number of extensions: 2663132
Number of successful extensions: 5255
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5251
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)