Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_M14
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 38 0.009
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 35 0.080
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 34 0.11
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 34 0.11
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical pr... 33 0.24
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 33 0.24
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 30 2.3
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 30 2.3
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z66567-3|CAA91489.1| 444|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z77663-15|CAH04699.1| 64|Caenorhabditis elegans Hypothetical p... 29 5.2
Z74033-9|CAN99687.1| 228|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z74033-8|CAA98470.1| 218|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 29 5.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 28 6.9
U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical pr... 28 6.9
U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 28 6.9
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 28 9.1
U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead transc... 28 9.1
U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead transc... 28 9.1
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 28 9.1
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 28 9.1
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 28 9.1
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 28 9.1
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 28 9.1
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/69 (42%), Positives = 46/69 (66%)
Frame = +3
Query: 33 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 212
++ D +KAFD++ H+ L+ KL ++ L++ + ++LSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 213 VPQGSALSP 239
VPQG+ LSP
Sbjct: 77 VPQGAVLSP 85
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 241 LLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRID 414
LLF +Y+NDI +A FADDT +Y S K LQ+A + W + ++
Sbjct: 86 LLFGIYVNDISSILPEKVACKQFADDTKLYAS-TPKTESENNLQSALDAVVDWTKGSKLT 144
Query: 415 INPTKSTAVLFKRGR 459
+N +K+ V + R
Sbjct: 145 LNQSKTVHVTVGKRR 159
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 51 KAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGS 227
KAFD+V H+ L+ KL++ G+ D+LS+R+F +V H +++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 228 ALSP 239
P
Sbjct: 62 VSGP 65
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 593 SNSRMTFRPHIKTVRDRAAFILGRLYPMICKRSKMSLXNKVTLYKTCIRPVMTYASVXSL 772
++S++TF+PHIK + + L R ++ + L+KT I P++ Y S
Sbjct: 202 TDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKTYILPLIEYGSAVYS 258
Query: 773 TRPA 784
+P+
Sbjct: 259 PKPS 262
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 42 DIAKAFDKVWHNGLIYKLYN-MGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVP 218
D+ AFDKV L L G+ ++ L + +YL R R + S+ + GVP
Sbjct: 475 DLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVP 534
Query: 219 QGSALSPXTIQFVY*RYTPVSGD 287
QGS +SP F Y + P D
Sbjct: 535 QGSVISPNLFTF-YLKDMPTQQD 556
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 244 LFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 423
LF+ Y+ D+P +T L +ADD +I +K ++Q + ++ ++ + I+
Sbjct: 543 LFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISA 602
Query: 424 TKSTAVLF 447
KST +F
Sbjct: 603 EKSTVTVF 610
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 34.7 bits (76), Expect = 0.080
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 448 KRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAPKVKYLGVTLEQ*DDIPPPHQ 627
K +PP + +PLP RR + P V P + P P P + + +PPP +
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRP-RPPISTADLCTPAFQQLPPPRE 291
Query: 628 D 630
+
Sbjct: 292 E 292
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +3
Query: 18 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 197
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 684 IPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 742
Query: 198 HVTAGVPQGSALSP 239
VT GV QG +SP
Sbjct: 743 PVTKGVRQGDPISP 756
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +3
Query: 18 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 197
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 423 IPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 481
Query: 198 HVTAGVPQGSALSP 239
VT GV QG +SP
Sbjct: 482 PVTKGVRQGDPISP 495
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +3
Query: 18 IPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPR 197
IP +F D KAFD V H + L G + ++++ N + + R
Sbjct: 513 IPLTLVFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAV 571
Query: 198 HVTAGVPQGSALSP 239
VT GV QG +SP
Sbjct: 572 PVTKGVRQGDPISP 585
>Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical
protein C43C3.3 protein.
Length = 446
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +1
Query: 139 TTCRTVRSDIESRERVPGPVTSQ-----PESRKAPPSPRLLFSLYINDIPRSPETHLALF 303
T TV S IES E V P++ P ++ P P+ +I I L LF
Sbjct: 332 TNSLTVVSRIESAELVASPISQPTIVDTPSEQRRDPCPKSSNMGFIPLIIMGSLASLLLF 391
Query: 304 ADDTAIYYSCRKKAL 348
+ AIY+ C+ K++
Sbjct: 392 SAGAAIYFGCKLKSM 406
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +3
Query: 33 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 212
+F D KAFD V H + L G + + ++++ N + + R VT G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 213 VPQGSALSP 239
V QG +SP
Sbjct: 99 VRQGDPISP 107
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 430 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 567
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 430 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAP 567
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/82 (30%), Positives = 28/82 (34%), Gaps = 1/82 (1%)
Frame = +3
Query: 378 HHGTVVPEVAHRH*P-HEKHSGAIQKGSPSEHHAEHPSPD*ARQHPRPRRSPNHDVRPAH 554
HHG H H P H H G + G+ HH H SP H +P H H
Sbjct: 525 HHGH---HGEHHHAPAHHGHHG--EHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGH 579
Query: 555 TVGPEGQIFRRHPRTVG*HSAP 620
G G H H AP
Sbjct: 580 H-GSHGVHHGHHESHGHGHHAP 600
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +3
Query: 378 HHGTVVPEVAHRH*P-HEKHSGAIQKGSPSEHHAEHPSPD*ARQHPRPRRSPNH 536
HHG H H P H H G + G+ HH H SP H +P H
Sbjct: 467 HHGH---HGEHHHAPAHHGHHG--EHGTHHGHHGSHHSPAHHGHHGEHHHAPAH 515
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 90 KLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSP 239
KL G+ +++L NR+F ++ S+ + +++GVPQGS P
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGP 889
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 3.0
Identities = 44/150 (29%), Positives = 59/150 (39%), Gaps = 5/150 (3%)
Frame = +2
Query: 170 SRGNAFPAPSRHSRSP-ARLRPLPXYYSVCILTIYPGLRRPIWRSSPMTPPSTTRVGRRR 346
SR + PAP+R RSP A P P + P RR R SP S RRR
Sbjct: 336 SRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARR---RRSPSASKSPPAPRRRR 392
Query: 347 CFIDDFRP----QLPPWDSGSGSGASTLTPRKAQRCYSKGVALRTPR*ASLSRLGASTPP 514
P ++PP AS +P +R S+ + PR R + +
Sbjct: 393 SPSKSRSPAPKREIPPARRRRSPSASK-SPPAPKRAKSRSKSPPAPR---RRRSPSQSKS 448
Query: 515 PPPFAQSRCTTSPYRGPRRSNI*ASPSNSR 604
P P + + SP + PRR SPS S+
Sbjct: 449 PAPRRRRSPSKSP-QAPRRRR---SPSGSK 474
>Z66567-3|CAA91489.1| 444|Caenorhabditis elegans Hypothetical
protein ZK455.3 protein.
Length = 444
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 539 IVIGRTAGAGVLTRLVGRGMLSVVFGGRPLLNSTAVLFVGL 417
I+I +L LVG ++ +V GR + NST L +GL
Sbjct: 44 IIIPTIFAVIILVGLVGNALVVIVAFGRQMRNSTNTLIIGL 84
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -3
Query: 506 LTRLVGRGMLSVVFGGRPLLNSTAVLFVGLMSMRHFRNHCPM 381
LT VG G+L ++ PLL++ + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>Z77663-15|CAH04699.1| 64|Caenorhabditis elegans Hypothetical
protein F53F4.16 protein.
Length = 64
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 194 PSRHSRSPARLRPLPXYYSVCILTIYP 274
P H PAR+ L YY+VC LT YP
Sbjct: 4 PWYHLERPARMTLLRAYYTVCALT-YP 29
>Z74033-9|CAN99687.1| 228|Caenorhabditis elegans Hypothetical
protein F38B7.2b protein.
Length = 228
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 506 TPPPPPFAQSRCTTSPYRGPRRSNI*ASPSNSR 604
+PPPP AQ+ PY R + S S+SR
Sbjct: 189 SPPPPYNAQNSAIPPPYHNARHGRVSRSNSHSR 221
>Z74033-8|CAA98470.1| 218|Caenorhabditis elegans Hypothetical
protein F38B7.2a protein.
Length = 218
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 506 TPPPPPFAQSRCTTSPYRGPRRSNI*ASPSNSR 604
+PPPP AQ+ PY R + S S+SR
Sbjct: 179 SPPPPYNAQNSAIPPPYHNARHGRVSRSNSHSR 211
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 490 PTRRVNTPAPAVRPITMYDQPIPW 561
P R V++P +PIT++DQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 488 SRLGASTPPPPPFAQSRCTTSPYRGPRRSNI*ASPSNSR 604
SR G S+PPPPP + T P P R PS R
Sbjct: 131 SRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQR 169
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 510 PRPRRSPNHDVRPAHTVGPEGQIFRRHPRTVG 605
P P + N R A VG + +F+ H R VG
Sbjct: 63 PLPEKDANCKFRVAEIVGEKSSLFKAHSRQVG 94
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 510 PRPRRSPNHDVRPAHTVGPEGQIFRRHPRTVG 605
P P + N R A VG + +F+ H R VG
Sbjct: 63 PLPEKDANCKFRVAEIVGEKSSLFKAHSRQVG 94
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 510 PRPRRSPNHDVRPAHTVGPEGQIFRRHPRTVG 605
P P + N R A VG + +F+ H R VG
Sbjct: 63 PLPEKDANCKFRVAEIVGEKSSLFKAHSRQVG 94
>U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical
protein T13C2.3a protein.
Length = 431
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 115 TGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLF 249
T + +S TT T ++ + P T+ PE K PP P ++
Sbjct: 320 TSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLPPQIY 364
>U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical
protein T13C2.3b protein.
Length = 506
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 115 TGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLF 249
T + +S TT T ++ + P T+ PE K PP P ++
Sbjct: 395 TSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLPPQIY 439
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 596 NSRMTFRPHIKTVRDRAAFILGRLYPMICKRSKMSLXNKVTLYKTCIRPVMTYASVXS 769
+ ++ F H K + A F L ++ +K + + LYKT IRP + Y +V S
Sbjct: 155 SEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKTFIRPRLEYGTVVS 209
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +1
Query: 457 RPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAPK--VKYLGVTLEQ*DDIPPPHQD 630
+PP + LP R P P V+P Y QP P P V PPP D
Sbjct: 771 QPPFNPFDVALP--RAQQP-PIVQPTRTYQQPAPIPPPNLVNGFNPYNPSHSQCPPPPMD 827
Query: 631 GTRSCRLHPRTSLP 672
+ + R T +P
Sbjct: 828 YSNNRRNSNLTPMP 841
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +1
Query: 457 RPPNTTLSIPLPTRRVNTPAPAVRPITMYDQPIPWAPK--VKYLGVTLEQ*DDIPPPHQD 630
+PP + LP R P P V+P Y QP P P V PPP D
Sbjct: 771 QPPFNPFDVALP--RAQQP-PIVQPTRTYQQPAPIPPPNLVNGFNPYNPSHSQCPPPPMD 827
Query: 631 GTRSCRLHPRTSLP 672
+ + R T +P
Sbjct: 828 YSNNRRNSNLTPMP 841
>U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform b protein.
Length = 280
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 167 SSRGNAFPAPSRHSRSPARLRPLPXYYSVCILTIYPGL 280
S G P+PS+ S SP P+P ++ +L + G+
Sbjct: 165 SGSGETSPSPSQPSISPPNENPMPSVQALNVLELLSGM 202
>U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform a protein.
Length = 300
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 167 SSRGNAFPAPSRHSRSPARLRPLPXYYSVCILTIYPGL 280
S G P+PS+ S SP P+P ++ +L + G+
Sbjct: 185 SGSGETSPSPSQPSISPPNENPMPSVQALNVLELLSGM 222
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 27.9 bits (59), Expect = 9.1
Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 6/144 (4%)
Frame = +2
Query: 191 APSRHSRSPARLRPLPXYYSVCILTIYPGLRRPIWRSSPM---TPPSTTRVGRRRCFIDD 361
A S RSP L P P SV + P P S+ + T +TT + + D
Sbjct: 3 ATSERPRSPLDLPPPPA--SVVLHPSAPPPPPPPLSSTEVVGNTTTTTTTHYAPKTWNDP 60
Query: 362 FRPQLPPWDSGSGSGASTLTPRKAQRCYSKGVALRTPR*ASLSRLGASTPPPPPFA---Q 532
P SGA L QR + + +S+S + + PPPP Q
Sbjct: 61 SITTAPKIPVSLLSGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPSDVAPPPPLPIPNQ 120
Query: 533 SRCTTSPYRGPRRSNI*ASPSNSR 604
S + + Y+ S+I S S+SR
Sbjct: 121 SSSSAASYQHHHASSISKSISSSR 144
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 27.9 bits (59), Expect = 9.1
Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 6/144 (4%)
Frame = +2
Query: 191 APSRHSRSPARLRPLPXYYSVCILTIYPGLRRPIWRSSPM---TPPSTTRVGRRRCFIDD 361
A S RSP L P P SV + P P S+ + T +TT + + D
Sbjct: 3 ATSERPRSPLDLPPPPA--SVVLHPSAPPPPPPPLSSTEVVGNTTTTTTTHYAPKTWNDP 60
Query: 362 FRPQLPPWDSGSGSGASTLTPRKAQRCYSKGVALRTPR*ASLSRLGASTPPPPPFA---Q 532
P SGA L QR + + +S+S + + PPPP Q
Sbjct: 61 SITTAPKIPVSLLSGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPSDVAPPPPLPIPNQ 120
Query: 533 SRCTTSPYRGPRRSNI*ASPSNSR 604
S + + Y+ S+I S S+SR
Sbjct: 121 SSSSAASYQHHHASSISKSISSSR 144
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.9 bits (59), Expect = 9.1
Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 6/144 (4%)
Frame = +2
Query: 191 APSRHSRSPARLRPLPXYYSVCILTIYPGLRRPIWRSSPM---TPPSTTRVGRRRCFIDD 361
A S RSP L P P SV + P P S+ + T +TT + + D
Sbjct: 3 ATSERPRSPLDLPPPPA--SVVLHPSAPPPPPPPLSSTEVVGNTTTTTTTHYAPKTWNDP 60
Query: 362 FRPQLPPWDSGSGSGASTLTPRKAQRCYSKGVALRTPR*ASLSRLGASTPPPPPFA---Q 532
P SGA L QR + + +S+S + + PPPP Q
Sbjct: 61 SITTAPKIPVSLLSGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPSDVAPPPPLPIPNQ 120
Query: 533 SRCTTSPYRGPRRSNI*ASPSNSR 604
S + + Y+ S+I S S+SR
Sbjct: 121 SSSSAASYQHHHASSISKSISSSR 144
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.9 bits (59), Expect = 9.1
Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 6/144 (4%)
Frame = +2
Query: 191 APSRHSRSPARLRPLPXYYSVCILTIYPGLRRPIWRSSPM---TPPSTTRVGRRRCFIDD 361
A S RSP L P P SV + P P S+ + T +TT + + D
Sbjct: 3 ATSERPRSPLDLPPPPA--SVVLHPSAPPPPPPPLSSTEVVGNTTTTTTTHYAPKTWNDP 60
Query: 362 FRPQLPPWDSGSGSGASTLTPRKAQRCYSKGVALRTPR*ASLSRLGASTPPPPPFA---Q 532
P SGA L QR + + +S+S + + PPPP Q
Sbjct: 61 SITTAPKIPVSLLSGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPSDVAPPPPLPIPNQ 120
Query: 533 SRCTTSPYRGPRRSNI*ASPSNSR 604
S + + Y+ S+I S S+SR
Sbjct: 121 SSSSAASYQHHHASSISKSISSSR 144
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 466 NTTLSIPLPTRRVNTPAPAVRPITMYDQP----IPWAPK 570
+ TL+ PLP R PA +RP M P +P+ PK
Sbjct: 369 SNTLTAPLPRRYQGPPAQVLRPPQMGPPPGINQVPYQPK 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,326,288
Number of Sequences: 27780
Number of extensions: 519051
Number of successful extensions: 2308
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2297
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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