Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_M12
         (837 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    27   0.21 
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    27   0.21 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   2.0  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   6.1  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   6.1  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   6.1  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   6.1  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   6.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   8.1  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   8.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   8.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   8.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   8.1  

>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 223 STVATPFPSFMASQNNDRSPMTNNRTDKTF 134
           +TV  P PSF  S+N D    T++  D T+
Sbjct: 28  NTVLQPRPSFELSKNGDEWTFTSSSGDNTY 57


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 223 STVATPFPSFMASQNNDRSPMTNNRTDKTF 134
           +TV  P PSF  S+N D    T++  D T+
Sbjct: 30  NTVLQPRPSFELSKNGDEWTFTSSSGDNTY 59


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 20/71 (28%), Positives = 24/71 (33%)
 Frame = +3

Query: 579 SQCAPVCPDGYYNDPVECSPRCERCVNGTCTEPGLCTCDSGYKNIDDVCVPQCLDCRNGE 758
           S C+  C  G     V     C  C N  CT+         Y+  D   V QC+ CR G 
Sbjct: 585 SVCSLPCEVGQAKKYVAGEQCCWHCFN--CTQ---------YQIRDHKDVTQCISCRQGT 633

Query: 759 CVAPNDCLCHD 791
                   C D
Sbjct: 634 VPDETHSACRD 644


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 22/96 (22%), Positives = 39/96 (40%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHKATHSFGLQ*EKMSRQD*QRLVRYNRIIREH*EESIMQDWLDIR 367
           CH R+E S H  R  ++         ++ SR+  ++  RY+++   + EE  +++    R
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDR-SREYKKKDRRYDQL--HNVEEKHLRERTSRR 286

Query: 368 GEDRQLCTEMHERVRERNLRGARGVHLSRASGPQTR 475
              R    E      ER  R  R     R+   + R
Sbjct: 287 RYSRSREREQKSYKNEREYREYRETSRERSRDRRER 322


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 22/96 (22%), Positives = 39/96 (40%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHKATHSFGLQ*EKMSRQD*QRLVRYNRIIREH*EESIMQDWLDIR 367
           CH R+E S H  R  ++         ++ SR+  ++  RY+++   + EE  +++    R
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDR-SREYKKKDRRYDQL--HNVEEKHLRERTSRR 286

Query: 368 GEDRQLCTEMHERVRERNLRGARGVHLSRASGPQTR 475
              R    E      ER  R  R     R+   + R
Sbjct: 287 RYSRSREREQKSYKNEREYREYRETSRERSRDRRER 322


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 22/96 (22%), Positives = 39/96 (40%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHKATHSFGLQ*EKMSRQD*QRLVRYNRIIREH*EESIMQDWLDIR 367
           CH R+E S H  R  ++         ++ SR+  ++  RY+++   + EE  +++    R
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDR-SREYKKKDRRYDQL--HNVEEKHLRERTSRR 286

Query: 368 GEDRQLCTEMHERVRERNLRGARGVHLSRASGPQTR 475
              R    E      ER  R  R     R+   + R
Sbjct: 287 RYSRSREREQKSYKNEREYREYRETSRERSRDRRER 322


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 22/96 (22%), Positives = 39/96 (40%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHKATHSFGLQ*EKMSRQD*QRLVRYNRIIREH*EESIMQDWLDIR 367
           CH R+E S H  R  ++         ++ SR+  ++  RY+++   + EE  +++    R
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDR-SREYKKKDRRYDQL--HNVEEKHLRERTSRR 286

Query: 368 GEDRQLCTEMHERVRERNLRGARGVHLSRASGPQTR 475
              R    E      ER  R  R     R+   + R
Sbjct: 287 RYSRSREREQKSYKNEREYREYRETSRERSRDRRER 322


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 22/96 (22%), Positives = 39/96 (40%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHKATHSFGLQ*EKMSRQD*QRLVRYNRIIREH*EESIMQDWLDIR 367
           CH R+E S H  R  ++         ++ SR+  ++  RY+++   + EE  +++    R
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDR-SREYKKKDRRYDQL--HNVEEKHLRERTSRR 286

Query: 368 GEDRQLCTEMHERVRERNLRGARGVHLSRASGPQTR 475
              R    E      ER  R  R     R+   + R
Sbjct: 287 RYSRSREREQKSYKNEREYREYRETSRERSRDRRER 322


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 614 QRSRGVLPAVRALRQRHVHGARPMH 688
           Q+ +  + AV+  +QRH H A+ ++
Sbjct: 780 QQMQAAMAAVQQSQQRHQHAAQMIY 804


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHK 238
           CH R+E S H  R  ++
Sbjct: 230 CHSRYEDSRHEDRNSYR 246


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 423 CEAPEVCTCPE 455
           CE PEVC  P+
Sbjct: 222 CEKPEVCDYPD 232


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 423 CEAPEVCTCPE 455
           CE PEVC  P+
Sbjct: 222 CEKPEVCDYPD 232


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 423 CEAPEVCTCPE 455
           CE PEVC  P+
Sbjct: 222 CEKPEVCDYPD 232


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,610
Number of Sequences: 438
Number of extensions: 5131
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)