Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_M11
(835 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048768-1|AAH48768.1| 1898|Homo sapiens protein tyrosine phosph... 33 1.7
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.9
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.9
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.9
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.9
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.9
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.9
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.9
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.9
Y00815-1|CAA68754.1| 1897|Homo sapiens put. LAR preprotein (AA -... 31 5.1
BX537361-1|CAD97607.1| 1191|Homo sapiens hypothetical protein pr... 31 5.1
AL583862-10|CAI14894.1| 1907|Homo sapiens protein tyrosine phosp... 31 5.1
AL583862-9|CAI14895.1| 1898|Homo sapiens protein tyrosine phosph... 31 5.1
AB209478-1|BAD92715.1| 1552|Homo sapiens protein tyrosine phosph... 31 5.1
AB177857-1|BAD66835.1| 1918|Homo sapiens LAR protein. 31 5.1
AB177856-1|BAD66834.1| 1484|Homo sapiens LAR splice variant 1 pr... 31 5.1
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 31 6.8
BC139779-1|AAI39780.1| 606|Homo sapiens zinc finger protein 652... 30 9.0
AB023141-1|BAA76768.2| 617|Homo sapiens KIAA0924 protein protein. 30 9.0
>BC048768-1|AAH48768.1| 1898|Homo sapiens protein tyrosine
phosphatase, receptor type, F protein.
Length = 1898
Score = 32.7 bits (71), Expect = 1.7
Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 12/143 (8%)
Frame = +1
Query: 292 KSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWATADVTVEG-- 465
K N+ T P ++ +R + VV + K V D W G
Sbjct: 1407 KQNAYTATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTETCGLI 1466
Query: 466 -VNVLATPSSSRITIGGLALMHQATLPWRSRLHQ------PDHQIPEFHTPTTPDLTSI- 621
V +L T + T+ AL H++ + L Q PDH +PE+ TP L +
Sbjct: 1467 QVTLLDTVELATYTVRTFAL-HKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVK 1525
Query: 622 SINPLNA--VLEGVRAGVKASGC 684
+ NPL+A ++ AGV +GC
Sbjct: 1526 ACNPLDAGPMVVHCSAGVGRTGC 1548
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>Y00815-1|CAA68754.1| 1897|Homo sapiens put. LAR preprotein (AA -16 to
1881) protein.
Length = 1897
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLEGVRAGVKASGC 684
PDH +PE+ TP L + + NPL+A ++ AGV +GC
Sbjct: 1505 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1547
>BX537361-1|CAD97607.1| 1191|Homo sapiens hypothetical protein
protein.
Length = 1191
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLEGVRAGVKASGC 684
PDH +PE+ TP L + + NPL+A ++ AGV +GC
Sbjct: 799 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 841
>AL583862-10|CAI14894.1| 1907|Homo sapiens protein tyrosine
phosphatase, receptor type, F protein.
Length = 1907
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLEGVRAGVKASGC 684
PDH +PE+ TP L + + NPL+A ++ AGV +GC
Sbjct: 1515 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1557
>AL583862-9|CAI14895.1| 1898|Homo sapiens protein tyrosine
phosphatase, receptor type, F protein.
Length = 1898
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLEGVRAGVKASGC 684
PDH +PE+ TP L + + NPL+A ++ AGV +GC
Sbjct: 1506 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1548
>AB209478-1|BAD92715.1| 1552|Homo sapiens protein tyrosine
phosphatase, receptor type, F isoform 2 precursor variant
protein.
Length = 1552
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLEGVRAGVKASGC 684
PDH +PE+ TP L + + NPL+A ++ AGV +GC
Sbjct: 1160 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1202
>AB177857-1|BAD66835.1| 1918|Homo sapiens LAR protein.
Length = 1918
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLEGVRAGVKASGC 684
PDH +PE+ TP L + + NPL+A ++ AGV +GC
Sbjct: 1526 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1568
>AB177856-1|BAD66834.1| 1484|Homo sapiens LAR splice variant 1
protein.
Length = 1484
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLEGVRAGVKASGC 684
PDH +PE+ TP L + + NPL+A ++ AGV +GC
Sbjct: 1092 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1134
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 30.7 bits (66), Expect = 6.8
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPVVIRGSISVSH 712
PP PGD G I P +P PP P P P P +P PP+ +I
Sbjct: 577 PPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGTAISP--PPPLSGDATIPPPP 634
Query: 713 PLVTGHG 733
PL G G
Sbjct: 635 PLPEGVG 641
>BC139779-1|AAI39780.1| 606|Homo sapiens zinc finger protein 652
protein.
Length = 606
Score = 30.3 bits (65), Expect = 9.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 31 VPLVVSAASAIPSLVNAFSSSKPPQTDNP 117
+PL S A+ +PS+VN ++ PP NP
Sbjct: 506 IPLTTSPATPVPSVVNTATTPTPPINMNP 534
>AB023141-1|BAA76768.2| 617|Homo sapiens KIAA0924 protein protein.
Length = 617
Score = 30.3 bits (65), Expect = 9.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 31 VPLVVSAASAIPSLVNAFSSSKPPQTDNP 117
+PL S A+ +PS+VN ++ PP NP
Sbjct: 517 IPLTTSPATPVPSVVNTATTPTPPINMNP 545
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,978,284
Number of Sequences: 237096
Number of extensions: 2746312
Number of successful extensions: 6207
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6206
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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