Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_FL5_M11
         (835 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102692-1|AAM27521.1|  395|Drosophila melanogaster LD38710p pro...    34   0.28 
AE014134-1711|AAF52820.1|  613|Drosophila melanogaster CG5924-PA...    34   0.28 
AY118590-1|AAM49959.1| 1858|Drosophila melanogaster LD45234p pro...    30   4.5  
AE014296-469|AAF47657.3| 2145|Drosophila melanogaster CG16757-PA...    30   4.5  
BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p pro...    29   7.8  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   7.8  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   7.8  
AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA...    29   7.8  

>AY102692-1|AAM27521.1|  395|Drosophila melanogaster LD38710p
           protein.
          Length = 395

 Score = 33.9 bits (74), Expect = 0.28
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 1/137 (0%)
 Frame = +1

Query: 292 KSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWATADVTVEGVN 471
           K N V  +  P ++ ++KG+R   L  L     P+        T  +   + D+ ++GVN
Sbjct: 135 KVNGVKWKRFPVLNKLLKGHRRGELTILTG---PTGSGK----TTFMSEYSLDLAMQGVN 187

Query: 472 VLATPSSSRITIGGLALMHQAT-LPWRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVL 648
            L      R T     L+ Q    P   RLH+ +H   EF       +T     PL  VL
Sbjct: 188 TLWGSFEIRNTRLAATLLRQYVGYPLDDRLHEFNHWAAEFERLPLYFMTFHGQQPLKPVL 247

Query: 649 EGVRAGVKASGCHQRLH 699
           E +     AS  H  +H
Sbjct: 248 EAIE---HASYVHDVMH 261


>AE014134-1711|AAF52820.1|  613|Drosophila melanogaster CG5924-PA
           protein.
          Length = 613

 Score = 33.9 bits (74), Expect = 0.28
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 1/137 (0%)
 Frame = +1

Query: 292 KSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWATADVTVEGVN 471
           K N V  +  P ++ ++KG+R   L  L     P+        T  +   + D+ ++GVN
Sbjct: 353 KVNGVKWKRFPVLNKLLKGHRRGELTILTG---PTGSGK----TTFMSEYSLDLAMQGVN 405

Query: 472 VLATPSSSRITIGGLALMHQAT-LPWRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVL 648
            L      R T     L+ Q    P   RLH+ +H   EF       +T     PL  VL
Sbjct: 406 TLWGSFEIRNTRLAATLLRQYVGYPLDDRLHEFNHWAAEFERLPLYFMTFHGQQPLKPVL 465

Query: 649 EGVRAGVKASGCHQRLH 699
           E +     AS  H  +H
Sbjct: 466 EAIE---HASYVHDVMH 479


>AY118590-1|AAM49959.1| 1858|Drosophila melanogaster LD45234p protein.
          Length = 1858

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 529  QATLPWRSRLHQPDHQIPEFHTPTTPDLTSIS 624
            Q  +PW+ + HQ   Q P  HT   P  TS+S
Sbjct: 1692 QPKVPWQQQHHQQIQQQPSAHTTGPPSPTSMS 1723


>AE014296-469|AAF47657.3| 2145|Drosophila melanogaster CG16757-PA
            protein.
          Length = 2145

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 529  QATLPWRSRLHQPDHQIPEFHTPTTPDLTSIS 624
            Q  +PW+ + HQ   Q P  HT   P  TS+S
Sbjct: 1979 QPKVPWQQQHHQQIQQQPSAHTTGPPSPTSMS 2010


>BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p protein.
          Length = 1718

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 483  PFILSHYYWRSRPYASSHPPLAISATSTRSSN 578
            P + SH Y     Y+SS  P  IS TS  SS+
Sbjct: 1140 PMLRSHSYQEEGSYSSSRRPSTISTTSITSSD 1171


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


>AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA
            protein.
          Length = 1857

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 483  PFILSHYYWRSRPYASSHPPLAISATSTRSSN 578
            P + SH Y     Y+SS  P  IS TS  SS+
Sbjct: 979  PMLRSHSYQEEGSYSSSRRPSTISTTSITSSD 1010


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,276,311
Number of Sequences: 53049
Number of extensions: 822743
Number of successful extensions: 2417
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2417
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)