Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_FL5_M08
(809 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 255 1e-67
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 255 1e-67
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 255 1e-67
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 255 1e-67
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 254 3e-67
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 252 1e-66
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 252 1e-66
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 247 4e-65
AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1 s... 33 0.92
AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1 p... 33 0.92
AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein. 33 0.92
BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring comp... 33 1.2
BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring comp... 33 1.2
AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens ... 33 1.2
BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.8
BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.8
BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein. 32 2.8
AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.8
AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9 s... 32 2.8
AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5 s... 32 2.8
AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.8
AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5 p... 32 2.8
AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein. 32 2.8
AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein. 32 2.8
AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein. 32 2.8
BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3 p... 31 4.9
BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein. 31 4.9
BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein. 31 4.9
AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7 s... 31 4.9
AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6 s... 31 4.9
AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3 s... 31 4.9
AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7 p... 31 4.9
AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6 p... 31 4.9
AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3 p... 31 4.9
AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein. 31 4.9
AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein. 31 4.9
AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein. 31 4.9
AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6 i... 31 4.9
BC012885-1|AAH12885.1| 480|Homo sapiens PLXDC2 protein protein. 31 6.5
AY358486-1|AAQ88850.1| 529|Homo sapiens ARFP2514 protein. 31 6.5
AL353147-3|CAH71084.1| 480|Homo sapiens plexin domain containin... 31 6.5
AL353147-2|CAH71083.1| 529|Homo sapiens plexin domain containin... 31 6.5
AK126613-1|BAC86612.1| 182|Homo sapiens protein ( Homo sapiens ... 31 6.5
AF378757-1|AAL11994.1| 529|Homo sapiens tumor endothelial marke... 31 6.5
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 255 bits (625), Expect = 1e-67
Identities = 119/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 254 bits (622), Expect = 3e-67
Identities = 118/149 (79%), Positives = 132/149 (88%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 252 bits (617), Expect = 1e-66
Identities = 119/149 (79%), Positives = 130/149 (87%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 252 bits (617), Expect = 1e-66
Identities = 118/149 (79%), Positives = 131/149 (87%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSF QAL I TKI R
Sbjct: 121 VTVPAQNTGLGPEKTSFSQALGITTKISR 149
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 708 SKGTIEIINDVHILKPGXKVGXSEA 782
S+GTIEI++DV ++K G KVG SEA
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEA 172
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 247 bits (604), Expect = 4e-65
Identities = 117/149 (78%), Positives = 131/149 (87%)
Frame = +1
Query: 268 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 447
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 448 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 627
MRKAI+ HL+NNPALEKLLP ++GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 119
Query: 628 VVIPAHNTGLGPEKTSFFQALSIPTKIQR 714
V +PA NTGLGPEKTSFFQAL I TKI R
Sbjct: 120 VTVPAQNTGLGPEKTSFFQALGITTKISR 148
>AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1
short form protein protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.92
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1
protein.
Length = 950
Score = 33.5 bits (73), Expect = 0.92
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.92
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 396 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 509
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 396 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 509
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ45374 fis, clone BRHIP3019643, highly similar
to Homo sapiens gamma tubulin ring complex protein (76p
gene) (76P). ).
Length = 254
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 396 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 509
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 34 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 69
>BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein.
Length = 890
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9
short form protein protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5
short form protein protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5
protein.
Length = 936
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein.
Length = 845
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 532 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 580
>BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3
protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein.
Length = 950
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7
short form protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6
short form protein protein.
Length = 803
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3
short form protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7
protein.
Length = 937
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6
protein.
Length = 950
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3
protein.
Length = 950
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein.
Length = 803
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein.
Length = 789
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6
isoform 2 precursor variant protein.
Length = 430
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 382 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 534
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 178 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 226
>BC012885-1|AAH12885.1| 480|Homo sapiens PLXDC2 protein protein.
Length = 480
Score = 30.7 bits (66), Expect = 6.5
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +2
Query: 380 NRCSRSVSRYVAPVSCSW-EKTQ*CAKP---SKTTWTTIQPSRNCCHTSRATLA-SCSPA 544
NRC VS + +CSW K Q C+ + W C S+ + + P
Sbjct: 283 NRCGPCVSSQIG-FNCSWCSKLQRCSSGFDRHRQDWV----DSGCPEESKEKMCENTEPV 337
Query: 545 ETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 652
ETS R+ T T ++ +++ S FP + P
Sbjct: 338 ETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLP 373
>AY358486-1|AAQ88850.1| 529|Homo sapiens ARFP2514 protein.
Length = 529
Score = 30.7 bits (66), Expect = 6.5
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +2
Query: 380 NRCSRSVSRYVAPVSCSW-EKTQ*CAKP---SKTTWTTIQPSRNCCHTSRATLA-SCSPA 544
NRC VS + +CSW K Q C+ + W C S+ + + P
Sbjct: 332 NRCGPCVSSQIG-FNCSWCSKLQRCSSGFDRHRQDWV----DSGCPEESKEKMCENTEPV 386
Query: 545 ETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 652
ETS R+ T T ++ +++ S FP + P
Sbjct: 387 ETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLP 422
>AL353147-3|CAH71084.1| 480|Homo sapiens plexin domain containing 2
protein.
Length = 480
Score = 30.7 bits (66), Expect = 6.5
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +2
Query: 380 NRCSRSVSRYVAPVSCSW-EKTQ*CAKP---SKTTWTTIQPSRNCCHTSRATLA-SCSPA 544
NRC VS + +CSW K Q C+ + W C S+ + + P
Sbjct: 283 NRCGPCVSSQIG-FNCSWCSKLQRCSSGFDRHRQDWV----DSGCPEESKEKMCENTEPV 337
Query: 545 ETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 652
ETS R+ T T ++ +++ S FP + P
Sbjct: 338 ETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLP 373
>AL353147-2|CAH71083.1| 529|Homo sapiens plexin domain containing 2
protein.
Length = 529
Score = 30.7 bits (66), Expect = 6.5
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +2
Query: 380 NRCSRSVSRYVAPVSCSW-EKTQ*CAKP---SKTTWTTIQPSRNCCHTSRATLA-SCSPA 544
NRC VS + +CSW K Q C+ + W C S+ + + P
Sbjct: 332 NRCGPCVSSQIG-FNCSWCSKLQRCSSGFDRHRQDWV----DSGCPEESKEKMCENTEPV 386
Query: 545 ETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 652
ETS R+ T T ++ +++ S FP + P
Sbjct: 387 ETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLP 422
>AK126613-1|BAC86612.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ44650 fis, clone BRACE2039607. ).
Length = 182
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 470 TWTTIQPSRNCCHTSRATLAS-CSPAETSLRSVTNCWRTKSKLQLVLVPLPHCQ 628
T T I PSR C ++ LAS C P + +R+ CW +L LVLV C+
Sbjct: 9 TGTVILPSRKCLSSTSPKLASGCCPWPSRMRACP-CWDAGIQL-LVLVSGGRCR 60
>AF378757-1|AAL11994.1| 529|Homo sapiens tumor endothelial marker
7-related precursor protein.
Length = 529
Score = 30.7 bits (66), Expect = 6.5
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +2
Query: 380 NRCSRSVSRYVAPVSCSW-EKTQ*CAKP---SKTTWTTIQPSRNCCHTSRATLA-SCSPA 544
NRC VS + +CSW K Q C+ + W C S+ + + P
Sbjct: 332 NRCGPCVSSQIG-FNCSWCSKLQRCSSGFDRHRQDWV----DSGCPEESKEKMCENTEPV 386
Query: 545 ETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 652
ETS R+ T T ++ +++ S FP + P
Sbjct: 387 ETSSRTTTTIGATTTQFRVLTTTRRAVTSQFPTSLP 422
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,784,870
Number of Sequences: 237096
Number of extensions: 2830526
Number of successful extensions: 10075
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 9700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10074
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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